Bombus vancouverensis nearcticus: 117156476
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Entry
117156476 CDS
T07628
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117156476
Enzymes [BR:
bvan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117156476
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117156476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_19
PhoH
UvrD-helicase
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
117156476
NCBI-ProteinID:
XP_033189397
LinkDB
All DBs
Position
Unknown
AA seq
2121 aa
AA seq
DB search
MPELPRITRSLRMFTNLGRIKSTRELQPNDLFKKEEEYKKLKSEFNWQDLCRHVPKDALH
HVNKLRQIAVETFGECSYELIDEFLLFTLQLLINDKLLTNEKFAILKRKAANLTLQDAQN
MMEIIRIIRERLKESILVLIENRETDADNIEISESKLFGSKIEYKPARVLWPDTETLRSM
SLENIIQSTDNFSMKYRNEDTNLSKTKFDKAIYKQNLESYAKYFTDMTLEEFEEFIIISK
LKNENSEDELLDLLGCESIEFIQYIIEHRKSIIALSSDSKVQKKCNVQRPVISGQVTIQS
EKEKQLLKQVRKKEKKLNKISNKREKRGESEENSFESLELSLKKNEALIEMHTPIFEKNV
TDRNMRENIPFVFDSNISSRTTAGYVSKQQIMLPQSAVKKDTEMFEEISIPPPESQLIDV
NYKPVMIDSLDDTGQMAFSGIKSLNIIQSIVFDAAYHTNENLLISAPTGAGKTNVAMLTI
VHQIKQHIEHGQLMKNQFKIIYVTPMKALAAEMTANFSKKLQCLGISVRELTGDMQLTKS
EIQQTQMIVTTPEKWDVVTRKGTGDISLTSIVKLLIIDEVHLLHGDRGPVVEALVARTLR
QVESSQSMIRIVGLSATLPNYLDVARFLRVNPHVGLFYFDHRFRPVPLSQTFIGVKATSP
LQEINYMDQVCYNNVIDMVSKGHQVMVFVHARNTTVKVAQTLKELAMKDGTLKLFIPEGQ
AKFTNKAFAKSRNRYLIELFSSGLSVHHAGLLRSERNLVEKYFAEGLIKVLVCTSTLAWG
VNLPAHAVIIRGTEIYDAKHGSYIDLDILDVLQIFGRAGRPQFDVSGHATIITSHNKLYH
YLSLLTNQIPIESSFIKYLADNLNAEIALGTISNVEEAIKWLSYTYLFVRMKLNYHVYGI
LPQVIIDDPNLEQKRKELIDVAAKALDEAKMIRYNISTGDLSTTNLGRIASHFYLKYDTI
EIFNRLTKPIMSEAEILAMISQSQEFGQLKVREDEMNELEELIQQYCELNVQGGVENIHG
KVNILLQTYLSHGRVNSFSLISDQAYIVQNAGRICRALFNIMLGQNRATMAGRLLEMAKV
IEVQQWSFKNPLCQFYCLSPEIINKIEENDLTIDRLNNMNIKEIGDILYNQKVAVLVKKC
CEELPALEMESNLQPITRTVLRIRLKIYPQFRWNDSVHGKTSEPFWIWIEDPDSDFIYHH
ECFNMTRKMVCNKLEQELVMTIPLQEPLPSQYIVRATSDRWLGCQNMLPLTFHDLILPEI
YPPHTNLLELQPLPVKALKDPLFEKLYKFSHFNPIQTQIFHCLYHTDNNVLLGAPTGSGK
TIAAEIAIFRVFKQYPMQKIVYIAPLKALVRERIKDWKVRLEEQLGRQVVELTGDVSPDI
KVIASASVIVTTPEKWDGISRSWQTRAYVKDVALIIIDEIHLLGEDRGPVLEVIISRTNF
ISSHTSKKLRVIGLSTALANAVDLANWLGIKEMGLYNFRPSVRPVPLAIHIHGFPGKNYC
PRMATMNRPTFQAIKQHAPSSPSLVFVSSRRQTRLTALDLIAYLAAEDNPKQWLHMCEEE
MNTILDHVRDSNLKLTLAFGIGLHHAGLQDRDRMIVEELFVNNKIQVLITTATLAWGVNF
PAHLVVIKGTEYYDGKQHRYVDMPITDVLQMIGRAGRPQFDTAGVAVVLVHDLKKNFYKR
FLHQPFPVESSLLAVLPDHINAEIVAGTIKNKQELLDYLTWTYFFRRLMKNPRYYDLNAL
EPNTINQYLSSLVDSTLKVLINSHCVKFDQEEQILYPQSMGKIASFYYLSHHTMLMFEES
LQEFLTLEQCLRILCNSYEYNELPVRHDEELLNEELSKMCRYQVDNYSYGSPHTKAFLLL
QAHFSRLPLPCVDYITDLKSVLDQSIRIVQAMIDTVAEHGWLASALMIMNLLQMLIQARW
IDEFAITTLPHVNPEHIQLFSALSSCLPKLCFIMRNKYSTLVEVLGKDFQEEQIFQIHQV
MKEMPMLHVELSIEMHDEEQRNQMFISLKTDNSDHINIRKDQDYILNITMRRKNKSNNLK
AHCPLFQKGKDEGWFLVLGNTSNLELLALKRASGINEQRKYYQLQFTAPSNLGQTTLVFY
LISDCYIGLDQEYNIKLNIIS
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccacgaattacaagatctttgcgtatgtttacaaaccttggacgtatt
aaaagtacaagggaactacaaccaaatgatttatttaaaaaagaagaagaatataaaaaa
ttgaaaagtgagtttaactggcaagatttatgcagacatgtacccaaagatgctttacat
catgttaataaactacgtcaaattgctgtagaaacgtttggagaatgttcttatgaactc
atagatgaatttttattgtttactctacaattactaatcaatgacaagttgttaactaat
gaaaaattcgcaattttaaaaaggaaagctgcaaatttaacacttcaagatgctcagaat
atgatggagataattagaataattcgagaaagattaaaagaaagtattttagtactcata
gaaaatagagaaacagatgctgataatattgaaatatcagaaagtaagttatttggctca
aaaattgaatataaacctgcaagagtattgtggccagatactgaaacacttcgcagtatg
tctttagaaaatattattcaaagtactgacaatttttcgatgaaatatagaaatgaagat
acaaatctgtctaaaactaaatttgataaggcaatatataaacaaaatttagagtcatat
gcaaagtattttacagacatgactttggaagaatttgaagagtttattataattagtaaa
ttaaaaaatgaaaattcagaagatgaattacttgatcttttaggttgtgaatctatagag
tttatacaatacattattgaacatcgaaaaagtattatagctttgagttctgattcaaaa
gtacaaaaaaagtgtaatgtccaaagacctgtgatcagtggacaagtgactatacagtct
gagaaagaaaaacagctactgaaacaagtacgaaagaaagaaaagaaattaaataagata
tcaaataaacgagaaaaaagaggagaatctgaagaaaatagttttgaatcattagaatta
tccttaaaaaagaatgaagcattaatagaaatgcatacacccatatttgaaaaaaatgtt
acagacagaaatatgcgagaaaatattccctttgtatttgactccaatatatctagtaga
acaacagctggttatgtatcgaaacaacaaataatgttaccacagagtgcagtaaaaaaa
gatacagaaatgtttgaagaaatttctatacctcctccagagtctcaactaattgatgta
aattacaaacctgttatgatagattccttagatgatactggacaaatggcttttagtggt
attaaatcattaaatataatacaaagtatagtatttgatgcggcatatcatactaatgag
aatttattaatttctgctccaacgggtgctggaaagaccaatgttgctatgttaactata
gtacatcaaataaagcaacatattgaacatggtcaattaatgaaaaatcaatttaaaata
atttatgtaaccccaatgaaagctttagcagctgaaatgacagcaaattttagtaaaaaa
cttcaatgtcttggtatatccgttcgtgaattaactggagatatgcaattgaccaaatca
gaaattcaacaaacacaaatgatcgttactacgccagaaaaatgggacgttgttactaga
aaaggtactggagatatatctcttactagtattgtaaaattattaattatcgatgaagtg
catttgttacatggtgatagagggcctgtagttgaagcattagttgctcgaacattaaga
caagtagaatcttcacaaagcatgataagaattgttggactttctgcaactttaccaaat
tatctagatgttgcaagatttttaagagtgaatccacatgtaggactcttttattttgat
catcgatttcgaccagtaccccttagtcaaacatttattggtgtaaaagctacatcacca
ttgcaggaaataaattacatggatcaagtatgttacaataatgttatagatatggtgtct
aaaggacatcaagtaatggtatttgtacatgcacgaaatactactgttaaagtggcacaa
acattaaaagaattagcaatgaaagatggtacacttaaattatttatacctgaaggtcaa
gcaaaatttacaaataaagcgtttgctaaatcacgcaacaggtatctaattgaattattt
agcagcggattatcggtacatcacgctggtttattgcgttcagaaagaaatttggttgaa
aagtattttgcagaaggtttaattaaggtattagtatgcacgtcaacattagcttggggt
gtaaatttacctgcacatgcagttattataagaggaacagaaatatatgatgcaaaacat
ggttcgtatatcgatttagatatattagatgttttacaaatctttggtcgtgctggtaga
ccacaatttgatgtatctggtcacgctactattattacttctcataataaattatatcac
tatttatcgttattaacaaaccaaatacctattgagagtagttttattaaatatttggct
gataatttgaatgctgaaattgcattaggtacaatatctaatgtagaagaagctataaaa
tggctaagttatacttatttatttgttcgaatgaagttaaactaccatgtttatggaatt
cttcctcaagttattatagatgatccaaatctagaacaaaaaaggaaagagttaattgat
gtagcagctaaagcgttagatgaagctaaaatgattcgatataatataagtacaggagat
ttgagtacgacaaatctaggacgtattgcaagtcacttttatcttaaatatgacactatt
gaaatttttaatagacttacaaaaccaattatgagtgaagcagaaatacttgctatgata
tctcaatctcaagaatttggacaattgaaagtacgagaggatgaaatgaacgaattggaa
gagttgattcaacaatattgtgaacttaacgttcaaggtggtgtagaaaatatacatggc
aaagtgaatattctattacaaacgtacttatcacatggtcgagttaattcattttcattg
atatcggatcaagcatatattgtgcaaaatgcaggacgcatatgtcgagcattgtttaat
attatgctaggacaaaatcgtgcaacgatggctggtcgtttattagaaatggcaaaggta
attgaagtgcaacaatggagttttaaaaatcctctgtgtcagttttattgtttatctcca
gaaattattaataaaatagaagaaaatgatttgacaattgatagattaaataatatgaac
attaaagaaattggagatattttgtataatcagaaagtagcagtattggtgaagaaatgt
tgtgaagaattacctgcattagaaatggaatcaaatttgcaacctattactcgcacagtt
ttaagaatacgtttaaaaatatatccacaatttcgatggaatgacagtgttcatggtaaa
acttcagaaccattttggatatggatagaagatccagacagtgattttatttatcatcat
gaatgctttaatatgacaagaaagatggtttgcaataaacttgaacaagagcttgtgatg
actataccattacaggaaccattaccttctcaatatatagtaagggcaacaagtgatcgc
tggttaggttgtcaaaatatgctacctctaacatttcatgatttaattttacctgaaata
tatccaccacatactaatttgttagagttacaaccattacctgtaaaagcattaaaagat
ccactatttgaaaagctttataaattctctcattttaatccaatacaaacacaaattttt
cattgtttatatcatacagacaataatgtcctgttaggagctccaactggttcggggaaa
acaattgctgcagaaattgctatatttagagtatttaagcaatatccaatgcaaaagatt
gtatacattgcaccattaaaagctttagttagagaacgaataaaggattggaaagttaga
cttgaagaacaactaggaagacaagtggtagaactaactggagatgtatcaccagatatt
aaagttatagcaagtgcgagcgttatcgtaactacaccagaaaagtgggatggtattagt
agaagttggcaaacaagagcttatgtcaaggatgttgctcttattattatagacgaaatt
cacttattaggagaagatcgtggccctgtattggaagttattatttcaagaactaatttt
atctctagtcacacttcaaaaaaattaagagttattggactttctacagcattagctaat
gcagtggatttagctaattggcttggtatcaaagaaatgggcctttacaattttcgtccg
tctgtacgacctgtaccgttagcaattcatatacacgggttcccgggaaaaaattattgt
cctcgaatggcaacaatgaataggccaacttttcaagcgattaaacaacatgcaccatct
agtccatctttagtgtttgtttcatcacgcagacaaacacgtttaactgcactagattta
attgcataccttgcggcagaagataatcctaaacaatggttacatatgtgtgaggaagaa
atgaacactattctagatcacgtacgagactcaaatttaaaacttacacttgcatttgga
attgggcttcatcatgctggtcttcaagatagagatagaatgattgttgaagaattattt
gttaacaataaaattcaggtgttgattacaacagctactttagcttggggtgtcaatttt
cctgctcacttggttgtaataaaaggaacagaatattatgatggtaaacaacaccgttat
gtagacatgcctattacagatgtacttcaaatgataggacgtgcaggcagaccccaattt
gatactgcaggagtggcagtggttctagtacatgacttaaaaaaaaatttttataagagg
tttctacatcaaccattcccagtagaatcaagtttactagctgttttaccagatcatata
aatgctgaaattgtggctggtacaattaaaaacaaacaagaattattagattatttaacc
tggacgtatttttttagaagattaatgaaaaatcctagatattatgatctaaatgcttta
gaacctaatacaattaatcagtacttatcttctttagtggacagtacattaaaagtgttg
ataaattcacattgcgtgaaatttgaccaggaagaacaaattttatatccacaatcaatg
ggtaaaatagcatcattttattatttatcacatcatactatgttaatgtttgaggaatcg
ttacaagaatttctaacattagaacaatgtttacgtattttatgtaattcttatgaatat
aatgaattaccagtaagacatgacgaagaattattaaatgaggaattaagcaaaatgtgt
cgttaccaagtagataattactcatatggttctccacatacaaaagcatttttattactt
caagcacatttttcaagacttcctttaccatgtgtagattatattactgatttaaaatca
gtacttgatcaatcaattaggattgttcaagcaatgatagatacagttgcagaacatgga
tggttagcaagtgcacttatgataatgaatttgcttcagatgcttattcaagctcgatgg
attgatgaatttgcaattactacattgccacatgtaaatccagaacatatacaattattt
tcagcgttgtcatcatgtcttccaaaattgtgctttattatgcgcaacaaatatagtaca
cttgtagaggtgcttggtaaagactttcaagaagagcaaatatttcaaatacatcaagta
atgaaagagatgccaatgcttcatgtcgagttaagtatagaaatgcacgatgaagaacag
agaaaccagatgtttatatcgctaaagactgacaattccgatcatataaatattcgcaag
gatcaagattatatactaaatattacaatgagaagaaaaaataagtctaataacttgaaa
gcacactgccctttgttccaaaaaggaaaggatgaaggttggtttctggttttaggtaat
acttctaacctagaattattagctctaaaacgagcatctggaataaatgaacaacgcaaa
tattatcaattacaattcacagcaccatcaaatctaggacaaacaactctagtgttttat
ttgatatccgattgttacataggactggatcaagaatacaatataaaactaaatataata
tcttaa
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integrated database retrieval system
