Bombus vancouverensis nearcticus: 117156581
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Entry
117156581 CDS
T07628
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04120
Ubiquitin mediated proteolysis
bvan04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117156581
04120 Ubiquitin mediated proteolysis
117156581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvan04121
]
117156581
Enzymes [BR:
bvan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117156581
Ubiquitin system [BR:
bvan04121
]
Ubiquitin ligases (E3)
U-box type E3
117156581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Glyco_hydro_67N
Motif
Other DBs
NCBI-GeneID:
117156581
NCBI-ProteinID:
XP_033189624
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MSELSQEEVRRRRMARLAGLDSFSSTVNSNHNNDPVSPNTPGPSKTFTEQIISPLKQQQF
QNPGVPMEIEESNNKQCSSSGVDIDSGIENMEVEEPDRKELKPRSRTTSSSTEVTTEQIH
AVISRVLRISWKEPAEGCIFLPQTATYALSTKLVDATEIINQALMEVLCMFMRDEDPLKE
INIDTSSDREDSPNSQTSPLQSPVTTFCRCDICCKSSQPKSLIYLLDCYSRVAIEERNHP
KKSSTPPLSDVLAVLRAQCVQYSSLVLQGLVGISQSSTTYPLSMTPLLYPVLSQSLPRGY
LHELVARTHTNAAVCNKIFTPLLQGLYLSMQQASLIRNTHRRPIEALEELIEICCGPSSN
VRPICRLIVHQIQFLPDIMTSAAGKEITTTSLLGPFLSVSVFAEDQLDMAETFLSGNLFV
NKSITLTLQQELESIRTSLHKIFHAILASSNCREAMLTYLATLLRYNEKRAQIQTEEFSL
AGDGFMLNLLSVLQKLSVKIKLDTVDPLYPFHPASFIEIKNDTRLKLTCQEVTDWLKHLE
RTHKWVEPKFPTQCWFLTLHCHHIALLPALQKYQRKLRTLRDVQKMLDDLQATEPQWKDS
PFASRNKELIERCKEQLKHLGKSKVYTDAGLIDPVLLRRCLHFYISVAEILLSLLTQTSP
GNPIPELPLPQEVPQKFTALPEWYVEDIAEFILFTLQFCPGVIINNMDNSLITWLLVVVC
TPHCIRNPYLIAKIIEVIFVINPNVQGRTESLHDQVMAHPISKTLLASYLMKFYTDVETT
GSSSEFYDKFSIRYHISLILKSMWDSPVHRKSIIDESNNGNQFVKFINMLMNDTTFLLDE
SLESLKRIHEIQELMSDLKAWSALSREQQHSRMKQLAADERQARSYLTLAKETVAMFQYL
TDDITEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLKVRIPQKYGWEPRALLSQLVDIYL
HLDCEIFAAALAADERSFCMELFIDAANKLERSVIKSIIEIERFVALAERAADIARDNRA
RDADYGDAPEEFRDPLMDTLMEEPVKLPSGIVMDKAVIIRHLLNSATDPFSRQPLSEDML
TPMPDLEKRISMWKQQKKKSTKI
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttaagccaagaggaagtaagaagaagacgtatggctcgtttagcgggctta
gacagcttcagttcaacagtcaattcaaatcacaataatgatccagtttctccaaataca
ccgggtccatctaaaacatttacagaacaaataatatcaccactgaaacaacaacaattt
caaaatcctggagtaccaatggagatagaagaaagtaataacaagcaatgtagcagttct
ggtgttgatatagattcagggattgaaaatatggaagttgaagagcctgatagaaaagaa
ttaaaaccaagatcacgcactacaagttccagtacagaggtaactacagaacaaatacat
gcagttatatcacgtgtactacgcatatcgtggaaagaaccagcagagggttgtatattt
ttaccacaaacagcaacatatgcgttatcaacaaaactcgttgatgccacagagattata
aatcaagcattaatggaggttttatgcatgtttatgagggatgaggatcctttaaaagaa
attaatatagacacctcctcggatagggaagatagtccaaatagtcaaacaagtccatta
caaagtccggtcacaacattttgccgttgtgatatttgttgtaagtcgtcgcaacctaaa
agtctcatttatttactagactgctattcaagagttgcgattgaagaacgaaatcaccca
aagaaatcgagtacaccaccactgtctgatgtactagctgttctaagggcacagtgtgtt
cagtattccagtcttgtactacaaggcctagttggtatttctcagtcttcaaccacatac
ccgttatccatgacacctcttctgtacccagtactttcgcaaagtttacctcgtggttat
ttacacgagcttgttgcgagaacgcacacaaatgcagcagtatgtaataaaatttttaca
ccactcttacaaggcttgtatctttcgatgcagcaagccagtttaattaggaatacgcat
cgaagaccgattgaagcattagaagagttaatagaaatttgttgtggaccgagtagtaat
gtacgaccaatctgtcgtttaatcgttcatcaaattcaatttttacctgacattatgacg
tcggccgctggtaaagaaattacaacaacgtctctccttggaccgtttttgtcggtttct
gtgttcgcagaggatcaactggacatggctgaaacattcctcagtggtaatctgttcgtc
aataaatcgataactttaacgttacaacaagaattagaaagtatcagaacatcactccat
aagatatttcatgcgatactcgcgagtagtaactgccgtgaagctatgttaacatactta
gcaacattattacgttacaatgaaaaacgtgctcaaatacaaacggaagaattctctctt
gccggagacggatttatgctgaatctcttgtcggtgttacaaaagctttctgtaaaaatt
aaactggacacggtagatccattgtatccgtttcatccagcaagttttattgaaataaag
aacgatacaaggctgaaacttacgtgccaagaagttaccgattggttaaaacatttagaa
aggacacacaagtgggtcgagccaaagtttccaacacaatgttggttccttactctacat
tgtcaccacatagcgttgttaccggctttacagaaataccagagaaagctgaggacttta
cgtgatgtgcaaaaaatgctcgatgatctacaagctaccgaaccgcaatggaaagacagc
cctttcgctagccgtaataaagaattgatagaacgttgtaaggaacaattgaaacatctt
ggcaaatctaaagtatacacagatgctggattaattgatcctgttttattgagaaggtgc
ttgcacttttacatatctgtagcagagattctgctaagtttattgacacaaacttcacca
ggaaatcctattcccgaactgcctttgcctcaagaggttccacaaaagttcacagcatta
ccagaatggtatgtcgaagatattgcagaatttatactatttactcttcaattttgccct
ggtgtgataataaacaacatggataattcactcattacatggttacttgtagtagtatgt
actccacattgtatacgaaatccgtatttaatagcgaaaattattgaagtaatatttgta
ataaatcccaacgttcagggacgaactgaatcgctccacgatcaagtaatggcacatcct
atatcaaaaacgttattagcatcatatttgatgaaattttacactgatgtcgaaacgacc
ggctctagttcagaattttatgataaattttcgattcgttatcacattagtttaatactg
aaatctatgtgggatagtccagtccatcgcaagtcgatcattgatgaaagcaataatggg
aatcaatttgtgaaatttattaacatgttaatgaacgacaccacatttttacttgatgaa
agtttggaatcgttaaagcgtattcatgaaattcaagaactaatgtcagatcttaaagca
tggtcagcgttatcccgtgaacaacaacattcgcggatgaaacaattggctgcagatgag
agacaagccagatcttatctcactttggccaaggaaactgttgctatgttccaatattta
acagatgatattacagaaccatttttgcggccagagttagttggaagattatgtgccatg
ttaaattttaatctacaacaattatgtggtcctaaatgtaaaaacttaaaagtaaggata
ccacaaaaatatgggtgggaaccaagagctttactaagtcaattggtcgacatatatcta
catcttgattgcgaaatttttgccgctgctttggctgccgatgaacgttcattctgcatg
gagctatttattgatgccgcaaacaagttagaaagatcagtaatcaaatctatcatagag
atagaaagatttgtagcgcttgcggaacgtgctgcagatatagcaagggataatcgtgcg
cgtgatgcagattatggtgacgcaccggaagaatttcgagacccacttatggacacactc
atggaagaacctgttaaacttccgtctggtatagttatggataaagcagttattattaga
catcttctcaatagtgctacagatccttttagtcgacaacctctcagcgaagatatgctt
acaccaatgcccgatttggagaaaagaatatcaatgtggaaacaacaaaagaaaaaatcg
acaaaaatataa
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