Bombus vancouverensis nearcticus: 117156713
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Entry
117156713 CDS
T07628
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117156713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvan03041
]
117156713
03009 Ribosome biogenesis [BR:
bvan03009
]
117156713
Enzymes [BR:
bvan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117156713
Spliceosome [BR:
bvan03041
]
Complex A
U1 snRNP components
U1 related factors
117156713
Complex B
117156713
Ribosome biogenesis [BR:
bvan03009
]
Eukaryotic type
Pre-60S particles
Helicases
117156713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Cac1_C
Motif
Other DBs
NCBI-GeneID:
117156713
NCBI-ProteinID:
XP_033189883
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MLRHVMGAIGSLRIRTYGASYHGGNYRTKERGSAYGNNANNRNGRFENRNKNNMHGTMGA
LKKPNWSFENLKPFKKDFYIPHPNVQSRHPQEIDIFRQENQITLKGEKIPNPIQHFEEGN
FPDHVMQCIRKQGFSEPTAIQAQGWPIAMSGQNMVGIAQTGSGKTLGYILPAIVHISSQQ
PLNHGDGPIALVLAPTRELAQQIQKVTYNFGYVRSTCIFGGAPKGSQARDLEQGVEICIA
TPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWP
KEVRNLAEEYLVDYTQLNIGSLTLSANHNILQIVDVCEEHEKQAKLQDLLQEISNVSPEG
GKTIIFVETKKKVESITKTIRRYGWPAVCIHGDKSQLERDFVLTEFRRNKDSILVATDVA
ARGLDVDDVKYVINFDYPTSSEDYIHRIGRTGRSNNSGTSYAFFTPQNSRQAKGLINVLK
EAKQVINPKLMELADRTGNDPARNRWGYGNYRRRETAFPKTHKRFDNLSYFDA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacatgtaatgggagctattggatccctgagaattaggacatacggagctagt
tatcatggtggaaactatagaacaaaagaaaggggatctgcatatggaaataatgctaat
aatagaaatggacgatttgaaaatcgcaacaaaaataatatgcatggcactatgggagcc
ttaaaaaaaccaaactggagttttgaaaatttaaagccttttaaaaaagatttttatata
ccacatcctaatgttcaatcacgtcatccacaagaaatagatatatttagacaggagaat
cagattactcttaagggagagaaaattcctaatcctatacaacattttgaagaaggaaat
tttcctgatcatgtaatgcaatgtattagaaaacaggggtttagtgaaccaactgctatt
caagctcaaggatggccaattgcaatgtctggacaaaatatggttggaatagcacaaact
ggatctgggaaaactttaggatacatcctacctgcaattgtacatattagcagtcaacaa
ccattaaatcatggtgacgggccaattgctctagttctagcaccaacaagagaattggcg
cagcaaattcaaaaagttacttataattttggctacgtaagaagcacttgtatttttggt
ggtgcgcctaaaggaagccaagctcgcgatttagaacaaggagttgagatttgcattgcc
acaccaggacgattaattgactttttggaacgaggtataactaatttacgtagatgtacg
tacttggtattagatgaagcagatagaatgctagacatgggttttgaacctcaaattcga
aaaattattgaacaaattaggccagatagacaggtattgatgtggtctgcaacttggccg
aaagaagttagaaatcttgcagaggaataccttgtagactatacacaattgaacattgga
tcattaacattatcagctaatcacaatattcttcagattgttgatgtctgtgaagaacat
gaaaaacaagcgaaattgcaagatcttcttcaggagattagtaatgttagtccagaaggt
gggaagacaataatttttgtagagacaaagaaaaaggtggagagtattactaaaactatt
cgtcgatatgggtggccagcagtatgtatacatggtgacaaatcgcaactagaaagagat
tttgttcttacagaatttagaagaaataaggattcaattcttgtagcaacagatgttgct
gctcgtggattggatgtcgacgacgtaaagtacgtgatcaacttcgattatccgacttca
tctgaagactacattcatagaattggtaggacgggccgatcaaataattcaggcacgagt
tatgccttctttacaccacaaaatagccgacaggctaaaggtttaattaatgtacttaag
gaagctaaacaagttatcaatccaaaacttatggaacttgcagacagaactggaaatgat
cctgcacgaaatcgttggggctatggaaattatcgcagaagagaaactgctttccctaaa
acacataaacgattcgataatctaagttactttgacgcgtag
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