Bombus vancouverensis nearcticus: 117156728
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Entry
117156728 CDS
T07628
Name
(RefSeq) transcription factor Sox-19b-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bvan03000
]
117156728
Transcription factors [BR:
bvan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117156728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
117156728
NCBI-ProteinID:
XP_033189912
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MRAGGNMCDGSFTETLRGMQGMSGTSPPGGAGVGPMGVGLGSPLGPTAKKAQVEHIKRPM
NAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMKEH
PDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGGMGQAGMGSYYGPAAAYGSLS
AASMAAAAAAAAQQSAAAMSAGLAAPAQVVSSMDAMKYSMEADKYRAAYMPPSTLAMSMY
SDPKYLDSSPKSYLDRSYLDSAKAYFEQSKLYMDQKPTITDYNRPSYEHNKLYEESSPGS
IVGGGPTRSPAAESPDMSKQHERTEQGSSSASSTSTSSAASPGASLPAYYPGSVQTSGLL
GPQMSQYSGYQTAPAPGNESFRRPLTVIF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaacatgtgcgacggctcgttcaccgagaccctgcgcggtatgcag
ggcatgtcgggtacgtcgccacccggtggagcgggggtcggccccatgggggttggcctc
ggcagccctcttgggccgaccgcgaagaaggcgcaggtggaacacattaagaggccgatg
aacgcattcatggtatggtcacgattacaacgacggaagatcgcgcaggagaacccgaag
atgcacaactctgagatatccaagaggctcggtgccgaatggaaactcttaactgaggac
gagaaacgacccttcatcgatcaggcgaaaaggttacgagcacagcacatgaaggaacac
cccgattacaagtacagacctagaagaaagccgaaaaccttacgaaaggaaggttatcct
tacagtattccatatcctagtgtgcccatggatgcgcttcgagctggaatggctggcgga
atgggacaggcaggaatgggatcgtattatggtcccgctgccgcttatggttcactatct
gcagccagcatggccgcagccgctgctgcagcagcacagcagtccgcagcggcgatgtct
gcgggtctagcagcacctgctcaggtggtgagctcaatggacgccatgaagtactcgatg
gaggccgacaagtaccgagctgcatacatgccgccgagcactctggcgatgagcatgtac
tccgaccccaagtacctggactcgagtccaaaatcgtacctggaccggagctatttagac
tccgcgaaggcgtatttcgaacaatcaaagctctacatggatcagaaacctacgatcacc
gactataatcggcccagttacgagcacaacaagctttacgaagagtccagccctggtagt
atcgtcgggggtggtccaacaaggtcaccagccgcagagtctccggacatgagcaaacag
cacgagaggaccgaacaaggttcgtctagcgcgagttctacgtctacctcgtcggctgcg
agtcctggtgccagtctgccagcctattatccaggctcggtgcaaaccagcggtctatta
ggaccccagatgagccaatacagcggttatcaaacagctccagcgcctggaaacgaatcg
ttcagacgacccctcactgtcatcttctga
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