Bombus vancouverensis nearcticus: 117156736
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Entry
117156736 CDS
T07628
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117156736
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bvan01009
]
117156736
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvan04131
]
117156736
03029 Mitochondrial biogenesis [BR:
bvan03029
]
117156736
Protein phosphatases and associated proteins [BR:
bvan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117156736
Membrane trafficking [BR:
bvan04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117156736
Mitochondrial biogenesis [BR:
bvan03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117156736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Phage_tail_terminator_2
Motif
Other DBs
NCBI-GeneID:
117156736
NCBI-ProteinID:
XP_033189925
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALQTVSQLKEAIERECGVVSAHQVLLMSGGESLEPNARVCS
YSAGTDTNPIYLFSKAAIESHHPPTPSIDYGSDVDLQNQIDASLTMPATYQTLIARAQLA
QQCCGLAREQTRICERLVHDQHLQQQGWAAVVANLEDITQMFESRADVLQQSFSVYLSER
QQHMELLQNFNADLGTLAQIPILPALRAQAEGLLSPDDQPNQSEKDSDGREEVLSLLRWI
SAKDNQSSLEQVAEQCSRGLEQFDERVMEALKTEVNAAIDNANKQDMKEIKGLGERLFAL
EQLMAQTKKLVHEQGELAQGFLQNQSRANNLGDASVLPDLCTSHRRQLLVMLQNHNKLRD
IRRRCTKAKEELSVNIYHRLKWIMYVENKMMEVDGKLVMYHESLKRLRRHLEVLQQIHLA
PHMYMNAVAEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRREFQSKFDGHFLNTLFP
GLEDTPPPFATQAPSVFDNGLPKLTAEDMESLRSQLPELALTISSPDLNSITQFFLSKSL
TEASTDGNKEKDSTSMRVDVATKEQERTRAPMLFDRGGFESETDTEEFEKIGQGATDSKP
ESYDGAKQMRQKQLEVGASRSVSPASSTSTNVSPLNSKVADLTNRSSSSSEPGSFHFPSL
SVSERPAQLSPLTECAENGESSSCLLHCATANGLPKYHETPSTTMAEEPNSLSPNPPSSL
SRSVMCDGQQQQCQQLSGSGGSSPSIGVCATDFMGTEFYMDESLPSSLSEHPIDGQHQAI
VSLLQENLGNTREEVERLSSILKTMKAVVYEALRTVRQELAVLRDRTNEEQAGFSKMTEQ
VRETLSLYSRECDRRLREREQELTVDHELEMADVKKLMQNREEEICTLKRNLVEKETELA
EHEHLISTMRQKLENEQTEMRNLQTHLHQQLEETLEQARADKEAAVKKANDERFIEIASL
TNSVAQSQKRIQELEESLKHARSEQQRMVKETTEKLQMEYKNELQSIRSRFKLMTASTME
SSPSDSSLEKIERPDFIELTSHALAQSTKDMKPENSATIRSIEDERMVKLVHDLRLATQA
IEEKDRTMEMYRRREIALTEECKRYKSTIRRLKDSESFKNVLIEAGLHKEHSEEQLEMSQ
SSLEEETKSLETEKDEVEVSESKKVRLEASDDLGCLSRRLEILENENKRMNAELQTLRES
KETAETKVETLEADKVRLEIELVKERSRSFTAPDTLPSSGSREKDMNDSVAVVSDSSSSQ
DATTSPKPQRSCGCITCFTHIKKKIDTTAAKLAELGHITVTSCDPGDNVLVFWDETHRTY
TFYQESTTLHFLDPKSTAALDLVWNPDESLKNTQSIVEVASKEYCHAIKIDNRYRVPRGT
KFYRVRAVKPVGDSAAMLASVQEE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgctctacatattccatgtggacaccggcactactatcaccttcgacatcaagttggcg
ttgcagactgtctcccagctgaaggaagcgatcgagagagaatgcggcgtggtctctgcg
caccaggtgctcctgatgagtggaggcgaaagcctggaaccaaacgcgcgtgtgtgttcc
tactcggccggaaccgacacgaatccgatctatttgttcagcaaggccgctattgagagc
caccatccacccacgccaagcatagactacggttccgatgtcgatcttcagaaccaaatc
gatgcgtcgttgacgatgccggccacttatcagaccctcattgcccgtgcccaattggct
cagcaatgctgtggattggcgcgggagcaaaccaggatctgcgagaggctggtccacgat
caacaccttcagcaacagggctgggctgccgtggtcgcgaatctcgaggacatcacgcaa
atgttcgagtcacgggccgatgttttacaacagagtttctccgtctatctgtcggagagg
caacaacacatggaactacttcaaaacttcaacgctgacctgggcacactggcgcagatt
ccgatcctaccagcgttaagagctcaggccgaaggtctgttgagtccggacgatcagcca
aatcaatcggagaaggactcagatggcagagaggaggttctcagcttgcttagatggatc
tcggcgaaagacaatcaaagtagtctggagcaggtggcggaacagtgttcgaggggtttg
gaacagttcgacgagagagtgatggaggcgttgaagactgaagtgaacgcggccattgac
aacgcgaacaagcaggatatgaaggagatcaagggtcttggcgaaagactgtttgcgttg
gaacaactgatggcgcaaaccaagaaactggtccacgagcagggagaacttgctcaaggt
tttcttcaaaatcagagccgagcgaacaacttgggggatgccagtgtacttcctgatctc
tgcacttcgcacaggcgccaactgcttgtgatgctgcaaaatcacaacaaattgcgcgac
attaggcgtaggtgcactaaagcgaaggaagaactgtcggtgaacatctatcatcggctc
aagtggatcatgtacgtggagaataagatgatggaggtggatggcaagctggtaatgtac
cacgaaagcctgaaacgtttgagaaggcatctcgaggtgcttcagcaaatccatctagcg
ccacatatgtacatgaacgctgtggccgaagtagttcgaagacgaaccttctcgcaagct
ttccttgtttgggctagtaacctggcgtgccagttgttgactgttcatagcgaggaactg
gctcgtagaagagaattccaaagcaaattcgatggtcacttcttgaataccctattccct
ggccttgaggatacgccgccacctttcgccacgcaagctccgtctgtttttgataacgga
ctgcccaagttgacagcagaggatatggaatctcttagatcgcagctacccgaactggcg
ctcactatctcgtcgccagatctgaacagtatcacgcagttcttcctgtcgaagagtctc
accgaggcaagcaccgatggcaacaaagaaaaagatagcacctccatgcgcgtcgatgta
gctaccaaggaacaggaacgaacgagagctccgatgttgttcgacaggggtggtttcgaa
tcggagacggacacggaggagttcgagaagatcggccagggtgccacggactctaagccg
gagtcgtacgatggcgcgaaacaaatgcgtcagaagcaattggaggttggtgcctcgcga
agcgtgtcccccgcttcctcgacctcaactaacgtatccccgcttaattcgaaagtcgcg
gacctgacgaaccggtcatcttcctcgagcgagcctggatccttccattttcccagtctg
tccgtcagcgagcgtccagctcagctgagtccgttaaccgagtgtgccgagaacggcgaa
tcgagcagctgtctgcttcattgcgctactgcgaacggtcttcctaaatatcacgaaacg
ccatcgacgacgatggccgaggagccgaactccctcagtccaaatcctccttcttccttg
tcacggtccgtgatgtgcgacggtcagcagcagcaatgccagcagctatccggtagtggt
ggtagcagcccctccattggagtatgcgctactgacttcatgggtactgaattttacatg
gacgaatctctgccgagcagtctcagcgagcatcccatcgacggccagcatcaggctatc
gtttcccttctccaggagaatcttggcaacacgcgcgaggaagtggaaaggcttagttcg
atcttgaagacgatgaaggcggtggtgtacgaggcattgaggactgtccgccaggagctg
gctgttctgagggatcgaactaacgaggagcaagctggtttctcgaagatgaccgaacag
gttcgcgagactttatcgttgtattcgcgcgagtgtgatcgtcgtcttcgagaacgcgag
caagagctcaccgtagatcacgagctcgagatggcagacgtgaagaagctaatgcagaat
cgggaggaagagatatgcacgttaaaacgaaatctcgtggaaaaagaaaccgagttggct
gaacacgagcatctaatatccaccatgcgtcagaaactggagaacgaacaaacggaaatg
agaaatctgcaaacgcatctgcatcaacagctcgaagaaaccttggagcaggctcgcgcc
gacaaagaggcggccgttaagaaggcgaacgatgaaaggtttatagaaatagcgtccttg
acgaattcggtagcgcaaagccagaaacgaattcaagagctggaggaaagtttgaaacac
gcgcgcagcgaacagcaaaggatggtgaaagaaacaaccgaaaagctgcaaatggaatat
aagaacgaactacaatccatcagaagccgtttcaagctaatgactgcatcaaccatggaa
agcagtccgagtgatagcagcctcgagaagatcgagagaccagatttcatcgagctcact
agtcacgcgttagctcaatcgacgaaagacatgaagccagagaattctgcgacgatacga
agtattgaggatgagaggatggtgaagctggttcacgatctacgattggccacgcaagcg
atagaggagaaagatagaacaatggagatgtataggagacgagaaattgcattaacggag
gagtgcaaacgttacaagagcacgattaggcgtttgaaagattcggagagcttcaagaac
gttctcatcgaggctggcttacataaagaacatagcgaagaacaactggaaatgagccag
agtagtctagaggaggaaacgaagagcttggaaacggagaaagacgaggtggaagtatct
gaatcgaaaaaggtacggttggaagcgagcgacgatctaggttgtctatccagaaggctc
gagatcctcgaaaatgagaacaagagaatgaacgcagagctgcagacacttcgtgagagc
aaagagacggccgagacgaaagtcgagaccttggaagcagataaggttcggctggagatc
gaattggtgaaggaacgatctagaagcttcactgccccagatacgttgccttcgtcagga
agtcgcgagaaagacatgaacgattctgtggcggtcgtttccgattcaagctcgtctcag
gacgcaacgaccagtccgaaaccacaacgttcgtgtggctgcatcacgtgcttcacgcac
attaaaaagaaaatagacacaaccgccgcgaagctggcagaactgggccatatcaccgtg
accagctgcgatccaggggataacgtattggtgttctgggatgagacgcacagaacgtat
acgttttaccaggaatcgacgacgcttcatttcctcgacccaaaatccaccgctgccttg
gatttggtctggaatcctgacgagtcgttgaaaaatactcagagcatcgtcgaagttgcc
tccaaggagtactgtcatgctataaagatcgataaccggtatcgcgttccacgtggcacc
aagttctatcgagtaagagctgtgaagcctgtgggtgatagtgcagctatgttagcgagc
gttcaagaagagtaa
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integrated database retrieval system
