Bombus vancouverensis nearcticus: 117156879
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Entry
117156879 CDS
T07628
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117156879
03036 Chromosome and associated proteins [BR:
bvan03036
]
117156879
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117156879
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117156879
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
HHH_9
Spt6_S1
S1_RRP5
Tex_central_region
OB_RRP5_4th
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
117156879
NCBI-ProteinID:
XP_033190218
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MADYLDIEAQESEEEDQLDVKEKKKLKKLKEMEDSEDEDDDEEDEGEVPGLIDDNSIDDD
NDGEDSDNSRKRKKSDDEDFDDRLEDEDYDLLEENLGVKVERKRRFKRLRRIQDEESEVE
EEREINDERDAIANELFQGSGDEDEERSEVSHRGEAEGYSEEESDDEDDFIVDGDGIPIT
EKRKKKRPVFSDAALQEAQDTFGIDFDYDEFGKYGEDAFEEEDEDEYIHDEIENRPRPSK
KHLKRKSTRKSIFEVYEPSELIRGHFTDVDNEIRTTDIPERMQLRAVPIIPTVEGSDELD
LEAKWIYKQAFCQPTISIQDSHLNEEAKERAKKGPQTIGKIKKALDFMRNQNFEVPFIAF
YRKEYVLPELNINDLWKIYKFDVKWCYLKQKKENLLKLFEKMRNFQLDEIMKNPDAPLPD
NIRVIKDNDIERLKNAHTFEELNDIYRHFMLYYNQDVSSMQEIAHKKEKQAQRKAKLEKR
KQRLAEAEENGDLSEIPDAEDEEEEINESLKQPVRKGPYYICRKAGLDGFTKRFGLSPEH
FAENLRDNYQRHEVDQDPIEPAIAANEFCSAIFTTSDEVVKAAQLMVAIQLAHEPLVRKC
VREMYMERAKVSVKPTKKGIKEIDEGHAIYGLKYLKNKPVRDLVGDQFLKLIVAEEDKLI
TLYFSDMIEGNTSNNYIDEIKQLYYRDEFSKSVQDWNALRTGSVEIALNRIIIPQLKKEL
RSNLLLEAKECVMKACCRKMYNWIKIAPYTCEFPDEDDEDWNTSKGIRVMGLAYVPDPSQ
AAFTCIISPEGECTDYLKLPHLLKRKNSFRENEKILKEVDLLGIKNFIATKKPHVVVVSG
ESREALMIVSDIKGCIANLAEEAQFPTIPVEICDNELTKVYANSNRGISEFRDYPEVLRQ
AISLARKIQDPLLEFSQLCTIDEEILCLKYHPLQDQLPKDDLIENLYLEFINRINEVGVD
LNKAVQQPYTANLVQFVCGLGPRKGQALIKILKQTNQRLENRTQLITACHMGPKVFVNCA
GFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANPAGALEEILE
SPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNCRYKDLRVPYQSLNTEKLFDILT
KETPETFYVGKLVLATVVGISHRRPQGDQLDQANPVRNDETGLWQCPFCLKNDFPELSEV
WNHFDAGACPGKATGIRLRLDNGISGYIHVKNLSDKHVANPEERVRVGQVIHCRIIKIEV
ERFSVECTSKTSDLIDKNHEWRPQRDVYYEAEAEEKDTKTEEDAKKLQQRQTYVKRVIIH
PSFHNISFAEAEKLMLTVKQGEAIIRPSSKGFDHLTVTWKVTENIYQHIDIREEGKENTF
SLGRSLWIGNEEFEDLDEIIARHINPMAAYTSELLDFKYYKTSVEGIKDKAEEILKEQKK
QNPGGIPYIVSAAKNYPGKFLLSYLPRIRCRHEYVTVIPDGFRFRGQMFNRINDLFRWFK
EHFRDPIPGQATPGTPHGTMTSRTPYNGTPGLNGVNPDTIQRVAQNMPHHLLHSLSKVAN
QTPHHYPPYTPGAASVNNYGMYGSTPYTPSGQTPFMTPYHTPHHTPHHPQTPNHSQGPFL
QPIPPAMNSNSHRTARSHRSVSSTSDATNWTKAAEAWARSKQSSKEFNTTPRYNESRKTA
RNQEAQNGRATPRNRTPSARTPSYKSPKETPFTNSSPRSMSLSGDGTPLYDESW
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttggacattgaagcacaagaaagtgaggaggaggaccaacttgatgtt
aaagaaaagaaaaaacttaaaaaattaaaagagatggaggacagtgaggatgaagatgat
gatgaagaagatgaaggagaagttccaggacttattgatgataattctatcgatgatgat
aatgatggcgaggatagtgataattctagaaaacgtaaaaaaagtgatgatgaagatttt
gatgatcgtttagaagatgaagattatgacctacttgaagaaaatttaggagttaaagtt
gaaaggaaacgtcgttttaagcgtttacgtagaatacaagatgaagagtcagaagtggaa
gaagaaagagaaataaatgatgaaagagatgctattgccaacgaattgtttcaaggttct
ggagacgaagatgaagaaagaagtgaagttagccatagaggtgaagcggaagggtatagt
gaggaagaaagtgatgatgaagacgattttattgtggatggtgatggaatacccataact
gaaaagaggaaaaagaaaagacctgtattttcagatgctgcattgcaagaagcccaagat
acttttggcattgattttgattatgacgaatttggaaaatatggagaggatgcgtttgaa
gaggaagacgaagatgaatatattcatgacgagatagaaaaccgcccaaggccatcaaaa
aaacatcttaagagaaagagtacaaggaaaagtatttttgaagtatatgaacccagtgaa
cttatacgcggacatttcaccgatgtagacaatgagattcgtactacagacattcctgaa
cgcatgcaacttcgcgctgttcccattatacctacagtggaaggttcggatgaattagat
cttgaagccaaatggatatataaacaggcattttgtcaaccaacaatttcaatacaagat
tctcatctaaatgaagaagccaaagaaagagctaaaaagggtccgcaaacaatcggcaaa
attaagaaagccttagattttatgcgtaatcagaacttcgaagttccgtttattgcattt
tatagaaaagaatatgtgttgccagagttaaacatcaacgatttgtggaaaatttataag
tttgacgtaaaatggtgctatctgaaacaaaaaaaagaaaatttattgaaactctttgag
aagatgaggaattttcaattagatgagattatgaaaaatcctgatgctccattacccgac
aacatacgagttattaaggacaatgatattgaacgacttaaaaatgctcatacttttgaa
gaattaaatgatatttatcgacattttatgttgtattataatcaggatgtgtcatccatg
caagaaattgcacataagaaggaaaaacaagcacaaaggaaagctaaattggaaaaaaga
aagcaacgacttgcagaagctgaagaaaatggagatctatctgaaattcctgatgcagag
gatgaagaagaagaaataaacgaatcattaaagcagccagttagaaaaggtccttactat
atttgcagaaaagctggattagacggatttactaaaagatttggtctctcacccgagcat
tttgctgaaaatcttcgagacaattatcaacgtcatgaagtagatcaagatccaatagaa
cctgcaatagcagcaaatgaattttgttctgcaatatttacgacaagtgacgaagtagtt
aaagctgcacaattaatggttgcgattcagttggcgcacgaaccattagttcgtaaatgt
gttagagaaatgtatatggaaagagcaaaagtatccgtaaaaccaactaaaaaaggaata
aaggagatagatgaagggcatgccatttatggattaaaatatcttaaaaataagcctgta
cgggatcttgttggtgatcaattcttaaaactaattgtagcagaagaagataaattaatt
acactttactttagtgacatgatagaaggaaatactagcaataattatatcgatgaaata
aagcaactatattatagggacgaatttagtaaaagtgtccaagattggaatgcattaaga
actggtagtgttgaaatagctttaaatcggattattatacctcaattgaaaaaagaattg
agatccaatcttttgttagaagcaaaagaatgcgttatgaaagcgtgttgccgcaaaatg
tacaattggataaaaattgctccatatacttgtgaatttcctgatgaagatgacgaagat
tggaatactagcaaaggaattcgtgtgatgggtttggcatatgtgcctgatccgtctcaa
gcagcctttacttgcataatttctccagaaggagaatgtactgattacctaaaattaccg
catttattgaaacgtaaaaatagttttagggaaaatgaaaagatattgaaagaggtagac
ttactaggaatcaaaaattttattgccacaaagaaaccacatgttgtggtagtaagtggt
gaatctagagaagcattaatgatagtatctgatataaaaggatgcatagctaatcttgca
gaagaagcacaatttcctacaatcccagtggaaatatgtgacaatgaacttactaaagtt
tatgcaaatagtaacagaggtatatctgagttcagagattatccagaagtattaagacaa
gctatatctttagcaagaaaaatacaagatcctctattagaattctctcagttgtgtacc
atagatgaagaaattctgtgccttaaatatcatcctttgcaagatcaacttcctaaagat
gatcttatagaaaatttatatttggaatttataaatcgtataaatgaagtaggagtagat
ttaaataaagcagttcagcagccttatacagcgaacctagtacaatttgtgtgtggctta
ggacctagaaaaggacaggctctcattaagattttgaaacaaactaatcagagactagaa
aatagaacacagcttataacagcatgtcatatgggacctaaagtatttgttaattgtgct
ggttttattaaaattgatacaaatagtttaggagatagcacagaggcatatgtagaagta
ctggatggctcacgtgtacatccagagacatatgaatgggcaagaaaaatggcagtagat
gctttagagtatgatgatgaagatgcaaatcctgctggtgccctagaagaaattcttgaa
tcaccagaaagattaaaagatttagatttggatgcatttgcagaggagcttgaaagacag
ggttttggaaacaagtgcattactctttacgatataagagctgaactgaactgtagatac
aaagacctccgtgtaccttaccaatctctaaatactgaaaaattatttgatattttgact
aaagaaactccggaaactttctatgtcggtaaattagttttggcaacagttgttggtata
agtcatagaagacctcaaggagatcaattagatcaagcgaatcctgttcgaaatgatgaa
accggattatggcaatgcccattttgcttgaaaaacgattttccagaattgtccgaggta
tggaatcattttgatgccggtgcatgtccgggaaaagcaactggaattcgtttaaggttg
gataatggaatatctggatatattcacgtaaaaaatctgtctgataaacatgtcgctaat
ccagaggaaagagtacgtgtcggacaagtaattcattgtcgcataattaagattgaagta
gaacgatttagtgtcgaatgtactagcaagacgagtgatcttattgataaaaatcacgaa
tggagacctcagcgagacgtttattatgaagcagaggcagaagaaaaagatacgaaaaca
gaggaggatgctaagaaattgcagcaacgacaaacttatgtaaaacgtgttataattcat
cctagtttccataatataagttttgcagaagctgaaaagttaatgttaactgtgaagcaa
ggggaagcaataatacgacctagcagtaagggattcgatcatttgaccgtaacatggaaa
gtcacagaaaatatttatcaacatattgatataagggaagaaggcaaagaaaatacattt
tctttgggtcgcagtttatggattggcaatgaagaattcgaagatttggatgaaattatc
gctagacatattaatccgatggctgcttatacttcggaacttttagattttaaatattac
aaaacaagtgtagaaggcattaaagataaagcagaagaaattttgaaggaacagaagaag
caaaatcctggagggataccatatattgtgtctgcagctaaaaattatcctggaaaattt
ttactttcgtatttaccacgaattcgttgccgtcatgaatatgttactgtaatacctgat
ggatttcgatttagaggtcaaatgtttaatagaataaatgacttgttccgctggttcaaa
gaacactttagagatcctataccaggacaagctacacctggtactccacatggaactatg
acttccagaacaccatacaatggtactccaggactgaatggagtgaatccagatacaata
cagagggtagcacagaatatgccacaccacttgttacattcactctcaaaagtagcaaat
caaactccacatcattatccaccatacactccaggagctgctagtgttaataactatgga
atgtatggaagtacgccttatacaccttccggccaaactccgtttatgaccccctaccat
acaccacaccacacgccccatcatccacaaacacctaatcactctcaaggaccattctta
caaccaattcctccagcaatgaattcaaattcacatagaactgcaagatcacatagatct
gtctctagtacttctgatgcaacgaattggacaaaagcggcggaagcatgggctcgatca
aagcaatcttcaaaagaatttaatactactccaagatacaatgaatctagaaaaacagca
cgaaatcaagaagctcaaaatgggagagcaactccacgcaatagaaccccatctgctcgt
actccgtcttataaatctcctaaagaaactccatttacaaattctagtccccggagtatg
tctttaagtggagatggtactcccctatatgatgaaagttggtaa
DBGET
integrated database retrieval system
