Bombus vancouverensis nearcticus: 117156887
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Entry
117156887 CDS
T07628
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117156887
03041 Spliceosome [BR:
bvan03041
]
117156887
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117156887
mRNA cycle factors
P-body specific factors
117156887
Spliceosome [BR:
bvan03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
117156887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
TPR_GEMI5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_RIG_1st
WD40_RFWD3
WD40_Gbeta
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
TAF1C_beta-prop
RAB3GAP2_N
Tricorn_2nd
CD_NTase_C
DDE_Tnp_IS240
Motif
Other DBs
NCBI-GeneID:
117156887
NCBI-ProteinID:
XP_033190234
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MNEVTLPPSPNWYLSNILACSFNGTIAWGARNIIVIGKLNENDKILQYSIIKHGHKSKVT
CLAFTPQFEEVNANLIASTGDDNTIKIWNSETLSVTYTYLLENDKQAIGVEWSYKNPYVI
YAATSDGYVLSWNAYFNTVSSISLGKVIPTYISSCPHDPHLVAVGSKSGLVYIVNFQDKG
KVVYKLRGHDTEIVSLSWCPSKNNVIRGNLNEDLLLASGGKDRSIFIWKAGGDGRYEMTI
SLPSAPLDSQQHRSKLNASVGNWVVVHWIEPRLLLTSSCWGELISWDLSTMIKGKPNVKV
IHAHHSRGLFCIAHVPNTQDISEENWRIRQSCRHTIWTVAQDRRIICCGIKENNVEIDYD
IFTQSGFVYCMAACPLDTSHIAFGVGDAMLRLWNLSAAHDTTFDITVLWQKIKGKIRAIA
WHPEKENLLAYATDEGRVGVFNINGNKLPTLYRQYHRSVIYTIGWGPCPKNKYVLYSCGE
GELVYYDSEKVTNEEPKSVLKKECTEFSWKPDFSCLAVGFENGTISFLNRKFETRGCAKF
ATEMVHCLVWHPESTATDLTFSQLKNYLAVAFESCTILIFDLTNFIDHFEKMEDSTNNEN
LKEKCDIYKVHEIVASLTGHVQNVVCLAWSPHVSGHLISSSYDGTAQIWNVGTQELIATY
TGHNGPVLCCMWSPLDPDFIITGSADSTVRIWRVAHNLPQKKEYKKLPKKAKKKQNETNK
IVDTIEDSLLELTNATSECSISESKTMMITETKNKKVRPYFSKCPNTTSQKTLLLHSLLN
VVKNMKSENFNMEDVQKDASYHMIPILFSSQENFISYLTTEKSAHIERNNYDVITEMDIW
YDNLKQNLEEAAKEKRLNDFLVSLSASLSMKMWKDMCELYAYQLVTEGNPCKAVSYLLCI
HKTYKAIEVFQAANLYKEAYVLAKCRLESDDPVLTEILKEWAKHSVNSGNFEQAAWIHTK
LGEFSDTVKYLARRKDAATLITAAEIAFLCNDEMSSKSLAEQAIIATLINSEYDFARNII
EKFPYLKYQEIYLLTYEELKKVIKGNVTLDLIQTWIDGKSNYGVLQTLETVCGDCNSYYT
DLCQNNFCNISDKEKMLWLTIGHEVALAIASIEKEQKLKHIVTALHTITQFELLHQKDLE
HLHSFLIEIIVKLDIKSPMDETSIYTKADYSVSISLRAYLCYALLNWFVYNINEESINNN
IQNYTNLIEHLLEDALNKQAIRHWTVTNEINKLENQLASAKCKMQEEIKTDQDIESFMEK
LNTLKTQKNQIFNDLVYVPNPVMVYGKANELCSKLYDETIKNKFLESISKMWLDATT
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagtaactttaccaccctcgccaaattggtatttaagtaatattcttgcttgt
tcttttaatggtactatagcatggggtgctagaaatataattgttattggtaaacttaat
gaaaatgataaaatattacaatactctattattaagcatggtcacaaatcgaaggtgaca
tgtcttgcatttactcctcagtttgaagaagtaaatgctaatttaatagcctccacagga
gatgataacacaattaaaatatggaattcagaaacattatctgtaacttatacttatctc
ttagaaaatgataaacaagcaataggcgtagaatggtcctataaaaatccttatgttata
tatgcagcaacttctgatggttatgtattatcatggaatgcttattttaatactgtttct
tcaatttcattaggaaaagtgatacctacttatatttcttcttgtcctcatgatccacat
cttgtagctgtaggctcaaagagtggattagtttatatcgttaattttcaagataaaggg
aaagtagtttacaaacttagaggacatgatactgaaatagttagcttatcatggtgcccc
tcaaaaaataatgtaataagaggaaatttaaatgaagatttactgttagcttcaggaggg
aaagatagatcaattttcatttggaaagctggtggagatggacgttatgaaatgacaatt
tcattgccttcagcacctcttgattctcagcagcatagaagtaaattaaatgcttctgta
ggtaattgggtagtagttcactggatagaacctagactattgcttacaagttcatgttgg
ggtgaattaatctcttgggatttatcaacaatgataaaagggaaacctaatgtcaaagta
atacatgcacatcacagcaggggtttattttgtattgcgcatgtaccaaatacccaagac
atttcagaagaaaattggagaataagacaaagttgtagacatacaatttggactgtggca
caagatcgaagaattatttgttgtggaataaaagaaaataatgttgaaatagattatgat
atatttacacaaagtgggtttgtttattgcatggctgcttgcccattagacacttcacat
attgcatttggtgttggagatgcaatgttacgattatggaatttatcagcagcacatgat
actacttttgatataactgttttatggcaaaagattaagggaaaaatccgcgcgatagca
tggcatcctgaaaaagaaaatttattggcttatgcaactgatgaaggtcgagttggtgta
tttaatataaatggaaataaattacctacattgtacagacaatatcatagaagtgtaata
tatactattggttggggcccatgtccaaaaaataaatatgttttatactcttgtggagag
ggagagcttgtgtattatgactcagaaaaagttacaaatgaagaaccaaaatctgtattg
aaaaaagaatgtacagaattttcttggaagccagatttttcttgcttggcagtaggattt
gaaaatggaacaatttcatttcttaatcgaaaatttgaaacacgtggatgtgctaagttt
gcaacagaaatggtgcattgcttggtctggcatcctgagagtacagcaacagacttgaca
ttttctcagctaaaaaattatttagctgttgcttttgaatcatgtactatacttattttc
gatttaactaattttatagatcattttgaaaaaatggaagattcaactaataatgaaaat
ttaaaggaaaaatgtgatatttataaagtgcatgaaattgtagcttctttaactggacat
gtacaaaatgttgtctgtttagcatggagtccacatgtaagtggacatctaatatctagt
agttatgatggaactgcacagatatggaatgttggaacacaagaattaatagctacatat
acaggacacaatggcccagtattgtgttgcatgtggagtccgttagaccctgattttatt
ataacaggctctgcagattctacagtacgaatatggagagttgctcataatttgccacaa
aaaaaagaatataaaaaattgccaaaaaaggctaaaaagaaacaaaatgaaacaaataaa
attgtggatactattgaagatagtttactagaattaactaatgctacatcagaatgttct
atttcagagtcaaagacaatgatgataacagagacaaaaaataaaaaagtacggccatat
ttctcaaaatgccctaatacaacatctcaaaaaacacttttacttcattctcttttaaat
gtcgtaaaaaatatgaaaagtgaaaattttaatatggaagatgttcagaaagatgcttcg
tatcatatgataccaatattattttcatcgcaagaaaattttatatcttatttaactact
gaaaaatctgctcatattgagagaaataactatgatgtaatcacagaaatggatatatgg
tatgataatctcaaacagaatttagaagaagctgctaaagagaaacgtctcaatgacttt
cttgtttcactttcagctagtctgtccatgaaaatgtggaaagatatgtgtgaactatat
gcatatcaattagtaactgaaggcaatccttgtaaagcagtatcatatttactttgtata
cataaaacctacaaagctatagaagtatttcaggctgcaaatttatacaaagaagcatat
gttcttgcaaaatgtagacttgaatctgatgatccagtactaacagaaatattaaaagaa
tgggcaaaacatagtgtaaattcaggcaatttcgagcaagcagcatggattcatactaaa
ttaggagaattttccgatacagtaaaataccttgcacgccgtaaagatgcagctacgtta
ataacggcagctgaaattgcttttttatgtaatgatgaaatgtcaagtaaatctttagct
gagcaagcaataattgcaactttgataaattcagagtatgattttgcacgaaatataata
gaaaaatttccatatctcaagtatcaagaaatatatttgttaacttatgaagaacttaaa
aaagttattaagggaaatgtaactcttgatttgattcaaacttggatagacggaaaatca
aattatggtgtattacaaactttagagacagtttgcggtgattgtaattcttattacact
gacttgtgtcaaaataatttttgcaatatttcagacaaggagaaaatgttatggttaaca
attggtcatgaggttgcattagcaatagcctctattgaaaaagaacagaaattaaagcat
attgttactgcattacatacgatcactcaatttgaactactacatcaaaaagatttagaa
catctacatagttttttaattgaaattatcgtaaaattagatattaaaagtccaatggat
gaaacaagtatttatacaaaagctgattattctgtatcaattagtttacgagcttattta
tgttatgctcttctaaattggtttgtatataatataaacgaagaatctattaataataat
atacaaaattacaccaatttgattgaacatttacttgaagatgcattaaataaacaagca
ataagacactggacagtaacaaatgaaattaacaaattagaaaatcaattagcttccgca
aaatgtaaaatgcaagaagaaattaaaactgatcaagatatagaatctttcatggaaaaa
ctaaatacattaaagacacagaagaatcagatcttcaatgatttagtttatgtcccaaat
cctgttatggtatatggcaaagcaaatgaactatgcagcaaattgtacgatgaaactata
aaaaataagtttttagaaagtatttccaaaatgtggttagatgctactacataa
DBGET
integrated database retrieval system
