Bombus vancouverensis nearcticus: 117157205
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Entry
117157205 CDS
T07628
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117157205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117157205
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117157205
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117157205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
117157205
NCBI-ProteinID:
XP_033190956
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MDKDKDIIVCVPGQRLCISDKFNIAGPGTYEQQGYIYSKLVGVVKLIQKENTRTIEVHGI
TEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDKDNIQM
YKCFRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEGVAMIPINWTQMQCPKTLR
KEFRKVAKVVPEHVVAEQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggataaagataaagacattatcgtatgcgtgccaggacagaggttatgtatctccgac
aaatttaatattgctggaccaggaacttatgagcaacaaggctatatctattcgaaatta
gttggtgtagtaaaattaatacaaaaagaaaatactcgtaccatagaagtccatggaata
acagagcaaagcattgttcctgcacctggtgatattgtaacagctatggttactattgtt
aatcaaagattttgtaaatgtagtataaaatgtataggtgacattgtattgacaagacct
tacagaggaattttaaggaaagaagatgttcgtgcaatagataaagataatattcaaatg
tataagtgctttagacctggagatattattcttgcaagagttatgccaatgacagaagca
catacttatcaactaagtacagcagaaaatgaattaggtgtagtgatagcacatagtgag
gaaggtgtagctatgatacccattaattggacacaaatgcaatgtcctaaaacattgcga
aaagaattcaggaaagtagcaaaagttgtgccagaacatgttgttgcagaacaataa
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