KEGG   Bombus vancouverensis nearcticus: 117157205
Entry
117157205         CDS       T07628                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117157205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bvan03019]
    117157205
Messenger RNA biogenesis [BR:bvan03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     117157205
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     117157205
SSDB
Motif
Pfam: ECR1_N EXOSC1 RRP4_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 117157205
NCBI-ProteinID: XP_033190956
LinkDB
Position
Unknown
AA seq 198 aa
MDKDKDIIVCVPGQRLCISDKFNIAGPGTYEQQGYIYSKLVGVVKLIQKENTRTIEVHGI
TEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDKDNIQM
YKCFRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEGVAMIPINWTQMQCPKTLR
KEFRKVAKVVPEHVVAEQ
NT seq 597 nt   +upstreamnt  +downstreamnt
atggataaagataaagacattatcgtatgcgtgccaggacagaggttatgtatctccgac
aaatttaatattgctggaccaggaacttatgagcaacaaggctatatctattcgaaatta
gttggtgtagtaaaattaatacaaaaagaaaatactcgtaccatagaagtccatggaata
acagagcaaagcattgttcctgcacctggtgatattgtaacagctatggttactattgtt
aatcaaagattttgtaaatgtagtataaaatgtataggtgacattgtattgacaagacct
tacagaggaattttaaggaaagaagatgttcgtgcaatagataaagataatattcaaatg
tataagtgctttagacctggagatattattcttgcaagagttatgccaatgacagaagca
catacttatcaactaagtacagcagaaaatgaattaggtgtagtgatagcacatagtgag
gaaggtgtagctatgatacccattaattggacacaaatgcaatgtcctaaaacattgcga
aaagaattcaggaaagtagcaaaagttgtgccagaacatgttgttgcagaacaataa

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