Bombus vancouverensis nearcticus: 117157381
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Entry
117157381 CDS
T07628
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
117157381
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bvan04040
]
117157381
Ion channels [BR:
bvan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117157381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_5
Ank_3
Ank
Ank_4
FliG_N
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117157381
NCBI-ProteinID:
XP_033191287
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MSQEVNQGTLRRESSVTISYLQELEKHFFELVAHGNVPDVREFLENNPQFNINAIDFQGV
TALHIAVSDRNTPMVEYLLTHPDIDPSDAHLHAIRDNEIKIAMIILNKLNDLSPGLEYAG
ITRSADFPDEATPLAIAAQYGHFEMISMLRNRLHFLPKPHPPSCNCVECKRERERSDILA
IERMRLFSYKAVTNPAYICQIVDDPILEAFNLSYELRKAASFVREFYHEYIELSESVMQF
ATDLIDCARSVDEVEVILKQSTGFAHSYKFIYPRLLFALHNTQRTFVAHPNVQQLITSKW
IDGWYEWKIMNPWMKSLFILMRVFMLPVILVVVLVAPNSKRSKFWQSPVNKFISSTASYL
VFLLIVFLQSNADKTEQLRGPPNSVYVWVLIIYVMSYAWSLIRMCIIHGPKRFFAGPWYW
FEMIMISLFILTFLYWITAALDVRINGQLELERKYWNQYDPTLIAEGIYCLATIMAFLKL
LYICQLDYHLGPLQLSLGQMIKDVVKFIILFSIIIFAFTAGTCKLYQYYEDMVQIDDESK
IKTQQVSSFVNFSATLKTLFWALFCMSPIESADVIIENLPGESENETIINHHTFTEVIGY
IAFAGFTFIGVIVILNMLIACMSNTLTEVTENVIVEWTFGRTETYVDFMLTTTLPPPFNI
IPTYVGIQPIVEYLKIWLKPTSNKRARWDPHHCFYIETLTEENNDEFSIVMSQLVQRYFR
KKDKKMEENEVEKVTKEIAELRNLLRDALTTV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggaagtaaatcaaggtaccttacgaagggaatcttccgtgacgatttcatac
ttgcaagaactggagaaacactttttcgaattggtcgcccatgggaatgttccggacgtg
agggagtttcttgaaaataatccgcaattcaatatcaacgctattgactttcagggtgtc
actgcgcttcacatcgcggttagtgacaggaacacgccaatggtggagtatctcctgact
catccggacatcgatccgagtgacgcgcatctacacgccatcagggacaacgagataaaa
atcgccatgattattttgaacaaactgaacgatctgtcacctggattggagtacgccggt
ataacgcgaagcgccgatttcccggacgaagccacgccactggcgatcgctgctcaatac
ggacacttcgagatgatcagtatgcttcgaaacaggcttcacttccttccgaaacctcat
ccgcctagctgcaattgcgtagagtgcaaaagagaacgagagaggagcgacattcttgcg
atagagaggatgcgattattctcgtacaaggcagtaacaaatccagcgtacatatgtcaa
attgtcgacgatccgattttggaagcgttcaatttgtcttacgagctacggaaagccgcc
tccttcgtcagagaattttaccacgaatacatagaactctctgagagcgtgatgcagttc
gcgaccgatctgatcgattgcgccagaagcgtggacgaagtagaagtcatcttgaaacag
tctactggatttgcccattcgtataaatttatatacccgaggctactgttcgcgctgcac
aatacgcagagaacctttgtggctcatcctaatgtacaacagttaattacgagcaagtgg
atcgacggctggtacgaatggaagatcatgaacccgtggatgaagtctttattcatacta
atgcgagtcttcatgctaccggtgattctggtagtggttttggtcgctccgaattcaaag
aggtcgaaattttggcaatcaccggtcaacaagtttatttcctccaccgccagctacttg
gtgtttctgttgatcgtttttcttcaatcgaacgcagacaaaaccgaacagcttcgtgga
ccgcctaactctgtatacgtctgggttttgataatttacgtgatgtcgtacgcctggtcg
ttgattcgtatgtgcataatacacggaccgaagagattcttcgctggaccgtggtattgg
ttcgagatgatcatgatatccctctttattctgaccttcctgtattggataactgctgcg
ttggacgtgagaataaatggtcagctcgaattggagaggaaatattggaaccagtacgat
cccacattgatcgccgaaggaatttactgtctggcaacgataatggccttcctgaaatta
ttgtacatctgtcagctggactatcatctgggcccacttcaactttctctcgggcaaatg
atcaaggacgttgtcaaattcatcattctcttcagcataatcatttttgcatttaccgct
ggcacgtgtaaactttatcagtattacgaggatatggttcaaatcgacgatgaatcgaaa
atcaagacccaacaggtcagctcgttcgttaatttctcagccaccttgaagactcttttc
tgggcacttttttgcatgagccccatcgaaagcgctgatgtgataattgagaaccttccg
ggggaatcggagaacgagaccatcatcaatcatcacacgttcacggaggttatcggctat
atagccttcgccggattcaccttcatcggtgtgatcgtgatactgaacatgctaattgca
tgcatgtccaacacgttgacggaagtcacagagaacgtgatcgtggaatggacattcggg
cgaactgaaacttacgtcgatttcatgctcacgactacactcccaccgccatttaacatt
attccaacgtacgttggtattcaaccgattgtcgagtacctgaaaatatggctaaaacca
acgtcaaacaagcgtgcacgatgggatccacatcactgtttttatatcgaaactttaacg
gaggaaaacaacgatgagttctcgatagtgatgtcccagttggtacagcgttacttccgg
aagaaggataaaaaaatggaggagaacgaggtggagaaggtaacgaaagagatcgcggag
ctgagaaatcttctaagagacgctctcaccactgtttga
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