Bombus vancouverensis nearcticus: 117157521
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Entry
117157521 CDS
T07628
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bvan04131
]
117157521
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bvan04812
]
117157521
Enzymes [BR:
bvan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
117157521
Membrane trafficking [BR:
bvan04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117157521
Cytoskeleton proteins [BR:
bvan04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
117157521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
MIT
RuvB_N
TIP49
AAA_22
AAA_5
AAA_16
NPHP3_N
Mg_chelatase
IstB_IS21
RNA_helicase
Phage_TTP_13
DUF815
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117157521
NCBI-ProteinID:
XP_033191475
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MSYSDGGRPIRKYGTKSPKKLCVTKNENSDKTTTTINCNNHHHNHYHHNHRFLDTPQPSV
HKRNLYIVSFPLILLFNVLRTLLYQLFVVFKYLYTSTSQLIQRRQACKQTCQLEIVVGQK
SSENLNNNLNNPGQTENEGMSQVPRRQVGPGPGDPLLAKQKHHHRRAFEFISKALKIDED
NEGQKEMAIELYKKGIGELEKGIAIECNGGRGEVWEHAQRLHDKMRTNLAMAKDRLDFLV
SVCELKKLDICNEYRAPGNKMDNEHPGKNLRVRRNIHTLQTTRSSLNTNHTKNTNSTQTV
NIGQNTCTQIPKLRPRSPKNYSAHSEASGRKLSVPGKRVGTVISKSQTLPRSMGRSTPVQ
SCHRVTPIKPSSTPPSVKRQLSVPGNGSPVRRPGTPTTSNSNRGTPTRKVPLLKGVDPKL
AQVILDEILEGGAAVHWEDIAGQETAKQALQEIVILPSLRPELFTGLRTPARGLLLFGPP
GNGKTLLARAVATQCNATFFSISAASLTSKYVGEGEKLVRALFAIARELQPSVIFVDEVD
SLLSERRDNEHEASRRLKTEFLVEFDGLPCNPEERVLVMAATNRPQELDEAALRRFTKRV
YVTLPDLRTRIMLLKRLLAKHNDPLTPEELNEMAVLTQGYSGSDLTGLAKDAALGPIREL
NPDQVKELDLNSVRNITMQDFRDSLKRIRRSVSPASLAAYEKWSFEYGDVSL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagtgatggcgggcgtccaattcggaagtatggcacaaagtcgccgaaaaag
ttatgcgtgacgaagaatgaaaatagtgataaaacaacaacaaccattaactgcaataat
catcaccataatcattaccatcataatcatcgctttctcgacacccctcagccgtcagta
cacaaacgtaatctctatattgtttcttttcctttgatactgctgttcaatgttctgagg
acacttctttatcagttatttgtggtatttaagtacttatatacatctacatctcagctg
attcaacgaagacaagcttgcaagcagacctgccagctagagatcgtagttggtcaaaag
tctagtgaaaatttaaataataatttaaataatcctgggcaaaccgagaacgagggaatg
tcgcaagtgcctagaaggcaggttggtcctggccctggagacccattacttgcaaaacaa
aaacatcatcatcgtagagcttttgaatttattagtaaagcacttaagattgacgaagat
aatgaaggccagaaagaaatggcaattgaactttataagaagggaattggagaattagaa
aaaggaatagctatagaatgtaatggtggtcgaggagaagtatgggaacatgcacaaaga
cttcatgataaaatgcgcactaatttggcaatggcaaaggatagacttgattttcttgtg
agtgtgtgtgagctgaaaaaactggatatctgcaatgaatatcgtgctcctggaaataaa
atggacaacgaacatccaggaaagaatctgagggtccgacgcaatatacacacattacaa
acaactcgatcttctttaaatacaaatcatactaaaaacacaaacagtacacaaacagtg
aacatagggcagaatacatgtacccaaattcccaagttaaggccacgttcaccaaaaaac
tattctgcccattctgaagcatctggaagaaaattatctgttcctggaaaaagagtgggg
acagttataagcaaaagtcaaacattaccacgcagcatgggacgctcaacaccagtacaa
tcttgtcatagagttacacctattaaaccatcatctacgccaccttctgtaaaaagacaa
ttatcagtacctggaaatggttcacctgttaggagaccaggaacaccaactacatcaaac
agtaatagaggaacacctacaagaaaagtacctcttttaaaaggtgtagatccgaaactt
gcacaagtaattttagatgagattttagaaggaggtgcagcagtacattgggaggacatt
gctggtcaagaaactgcaaagcaagcattacaagagatagtcatcttgccttcattaaga
ccagaattatttactggcttacgaacaccggcaagaggtttattattatttggtccacca
ggaaatggaaagacattgcttgcacgtgctgtggctacccagtgcaacgctacatttttt
tcaatatctgctgctagtcttacatcgaaatatgttggagaaggagaaaagctagtacga
gctctttttgctatagcacgagaattacagccatctgtgatctttgttgacgaagtggat
tcgttgttaagtgaacgtagagataatgaacatgaagcttcacggcgattgaagacggaa
tttttagttgaatttgatggtttgccatgtaatccagaagaaagggtattagttatggct
gctacaaatagacctcaagaattggatgaagctgcattaaggagattcacaaagcgagta
tatgttacgttgccagatttacgaacaagaattatgttactgaagcgacttttagctaaa
cataatgatcctttaacaccagaagaactaaatgagatggcagttttaacccagggctat
tctggaagcgatttaacgggtttagcaaaggatgcagcacttggccctattagagaactt
aatccagatcaagtaaaagaattggaccttaattccgtacgcaatattacaatgcaagat
tttcgtgattcgcttaaaagaattcgtagatcagtgtcacctgcaagtttagcagcttat
gaaaagtggagcttcgaatatggtgatgtaagtctatga
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