Bombus vancouverensis nearcticus: 117157647
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Entry
117157647 CDS
T07628
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117157647
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117157647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_19
TPR_8
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_10
TPR_Slam
TPR_7
TPR_9
ARM_TT21_4th
TPR_MalT
PknG_TPR
ANAPC3
TPR_21
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
117157647
NCBI-ProteinID:
XP_033191736
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MAGSIEIPLRDTDEVIELYLDQLPEGDEVLGILRQEHAQLNIWVNLALEYYKQHKIEDFI
KILESSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDSQCVGALVGLSVL
KLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTEN
ESMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPHFGLGQMYVYRGDAENAA
QCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIELAQI
LEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARNNLEESLARS
KADALHDSVYYNSIAVTTTYNLARLNEALCIFDKAEKLYKAILKKHPNYVDCYLRLGCMA
RDKGQIYEASDWFKDALSINNEHPDAWSLLGNLHLVKMQWGPGQKKFERILKNPATSTDA
YSLIALGNIWLQTLHQSGKDKDREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKG
CVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQ
YLGRAYFKAGKLREAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQ
AVHELGLSHKYFQYLSTHGDKMGQLAEAETRRCQDLLSQAQYHVARARRLDEEEKMLRRK
QEEERQAFKMRQTEEQRKLEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPSEKPGRKGK
RVRTDQYVSDSGGSGGEEGREEAPRERKRKKKTSGERKEKRGKGRGKRKREMRSGESGSE
SDRLKRGKRRRKGIIKKDRTFRKSTAETAKGKMPLSKETISTSESDSDSGGLKIASGGES
GNEGRGRGNRRIMSDSGGSRASSSRSHSTSKSKSRSRSSSRSRSRSQSGFRSRSQSRSQS
RSRSGSKSRSQSRSKSPSRSVSAKSGSRSRSRSGSRKSQSRSRSRSGSRKSGSQPRSRSG
SAASARSRSGSAASARSRSGSARSARSRSGSAASARSRSRSPSGSRKAASRSRSRSGSRS
GSQSEGRVSRSRSRSKSKSVSRSRSRSGSRSKSGSRSRSPSGSARSATPESRKSVSGSDV
GSRHSSTDRGGGSESE
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttccatagagattccactccgtgatacagatgaggtaattgagctgtaccta
gatcaattaccagaaggagacgaggttcttggtattttacgtcaagaacatgcccaactt
aatatttgggtcaatttggctcttgagtattacaaacaacataaaatcgaggatttcatt
aaaatacttgaatcttctcggattgatgctaatattgattaccgtgactatgaaaaagat
caaatgcgtgcgttggatatgttggctgcatattatgtgcaggaagccaacagagaaaag
aataaagacaaaaagagagatttatttacaaaagctaccctattatatacaactgcggat
aagattattatgtatgaccagaatcatttacttggcagagcttatttctgcctcctggaa
ggggataagatggatcaggctgatgcccaatttaattttgtactaaatcagtctccaaat
aatattccttccctactaggaaaggcatgcatagcatttaacaaaaaagattatagaggt
gcgcttgccttttataaaaaggcattgagaacgaatccaaattgtccagctgctgtgaga
ttggggatggggcattgttttatgaaattaaataaccaggaaaaagcacgtttagcattt
gaaagagctttacagttagatagccaatgtgttggagcattagttggactttcagtactg
aaactgaatcaacaacagcctgatagtatcagaactggtgttcaaatgttatctaaagct
tataccattgattcgactaatcccatggtgttgaatcatttggcaaatcattttttcttt
aaaaaggactataacaaagtacagcacttagccctccatgcatttcacaatacagagaac
gagtctatgcgtgcagagagttgctatcaattagccagagcatttcatgttcaaggtgac
tatgaccaagcgttccaatattactatcaggcaacacaatttgcacctccagtttttgta
ttaccacactttggcttaggtcaaatgtatgtttatcgtggtgatgcagaaaatgcagca
caatgtttcgaaaaagtgttgaaagctcagccaggtaattatgaaacaatgaaaattctt
ggatctctgtacgcaaactcaagttctcaatcgaaacgcgatattgctaaaaaccatctt
cgtaaagtaactgaacaatttccggatgatgttgaagcatggattgaattggctcaaata
ttggagcaaagtgaccttaatgcagccttaaatgcatatggtacagcaaccagaatttta
aaagagaaagtccaggcagatataccaccagaaattctaaataatgttggtgctctacat
tatagacttggaaacttggaagaagctaggaataatttggaggaatctttagcgcgttct
aaagctgatgccttacacgattctgtatactataactcaattgcagttacgacaacatat
aatttggctcgtttgaacgaagctttatgtatatttgataaagcggaaaaattatacaaa
gccattttaaagaaacatccaaactatgtagattgttatttacgacttggctgtatggct
cgagataaaggacaaatttatgaagcgtctgattggtttaaggatgctttaagcataaat
aacgagcacccagatgcatggtctcttttgggtaacttacatttggttaaaatgcaatgg
ggtcctggccagaagaaattcgaaagaattttaaaaaatccagccacaagtaccgatgcc
tattctttgattgctttgggtaacatttggttgcaaacattgcatcaaagtggaaaagat
aaagatcgagagaagcgacatcaagacagagcattggctatgtataaacaggttttgcga
aacgatcctaaaaatatttgggctgcaaatggaataggagctgtactagcgcataaaggt
tgtgtaaatgaagctagagatatttttgctcaagttcgagaagcaacagcagaattttgc
gatgtatggttgaatattgcgcacatttatgtagagcaaaaacaattcgttagcgctatc
caaatgtatgaaaactgccttcgaaagttctataaatatcatcatgtcgaagttttgcaa
tatcttggaagagcttactttaaagctggtaaattaagagaagcaaaattgacattatta
aaggcaagaagagtagctccacaggacactgttttgttatacaatattgcacttgtcctt
caacgtctagcgacacaaattttgaaggatgagaagtccaccttaacgacagtactccag
gcagttcacgaattgggactctcacataaatacttccaatatctatcaacgcatggagat
aaaatggggcaacttgcagaagcagaaacaaggaggtgtcaagatcttttatcgcaagcg
caatatcatgttgccagagctagacgattggacgaagaagaaaaaatgcttagaagaaaa
caagaagaagaaagacaagcatttaaaatgcgacaaacggaagaacaacggaaacttgag
gaaatgcgacgacaaaaagaagaggaaatgttacagaaacgtcaagagtacgttgaaaag
acaaagaacgctttggtattcggcgaaatgccttcagaaaaacctggaaggaaaggaaaa
agagtacgcactgatcaatacgttagtgacagtggtggttctggaggagaggaaggtcgg
gaggaagcacctagagaaaggaaacgcaaaaagaaaacaagtggtgaacgtaaagaaaaa
aggggcaagggtagaggaaagcgcaagagagaaatgcggagtggagaaagtggttcagaa
agtgatcgactcaagcgtggaaaacgtcgaagaaaagggattattaagaaagacagaaca
tttcgaaaaagtacagctgagactgcaaaaggaaagatgcctttatcaaaggaaactata
tcgacgagcgaatctgatagcgattcaggaggtcttaaaattgcaagcggtggtgaaagc
ggcaacgaaggtcgcggacgcggaaatagacgaattatgtctgactcaggaggatcccgt
gcatcgagttctaggtctcattccacatcgaaatctaaaagccgttctagaagtagttca
cgatcgcgatcacgatcacaatcaggatttcgatctcgatcccagtctcgttcacagtct
agatctcgttcaggttctaagtcgagaagtcaatcgcggtcgaaaagtccgtcgagatcc
gtttcagcaaaaagtggttcacgctcgagatcaagatcagggtcgcggaagagtcaatcg
cgatcaagatcgcgtagtggttcgaggaaaagtggatcgcagccaagatcaaggtcgggt
tctgcagctagtgcacgatcaagatcgggttctgcagctagcgcacgatcgagatcaggc
tctgcacgtagtgcacgttcgagatcgggatctgcagctagtgcacgatcgagatcaagg
tcccctagtggttccagaaaagcagcttcgcgatcaaggtcaagatcaggatcaaggagt
ggttcacagtcggagggacgtgtatcaagaagcagaagccgatcaaaatctaaatctgtg
tcaagatctagatcgcgttccggctcacggtcgaagagtggctctcgaagtcgcagccct
agtggatcggcaagatctgctactccagagtcgagaaaatcagtttcgggcagtgacgtt
ggttcccgccattcgagtacagatcgaggaggtggcagcgaaagcgaataa
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