KEGG   Bombus vancouverensis nearcticus: 117157681
Entry
117157681         CDS       T07628                                 
Name
(RefSeq) lysine-specific demethylase lid isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
bvan  Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bvan01009]
    117157681
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bvan03036]
    117157681
Enzymes [BR:bvan01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117157681
Protein phosphatases and associated proteins [BR:bvan01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117157681
Chromosome and associated proteins [BR:bvan03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117157681
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_ash2p_like PHD-1st_NSD PHD_5 Cas_APE2256 zf-PHD-like
Other DBs
NCBI-GeneID: 117157681
NCBI-ProteinID: XP_033191779
LinkDB
Position
Unknown
AA seq 1644 aa
MVSRFDTNFGCEDFFGTYRCIQDMACDRGDSDFEFVIPPEAPVFEPSIEEFHDPLGYIAK
IRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFW
ELQGSSLKIPLVERKALDLYSLHKIVTDEGGIDTVTKERRWAKIANKLGYPSGRSVGSIL
KNHYERILYPFDVFKQGKTLADIKIEPDSNVNEKKDRDYKPHGIISRQQIKPPPEKFSRR
SKRFSGQEEKQEVSIKQEDCKEECDSDNDCKDGIRNKQYDDKDNSKELKKLQFYGPGPKM
AGFNTKEGKKSNKTRGVKLIYEVDPLAKYICHNCGRGDNEESMLLCDGCDDSYHTFCLMP
PLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMV
PTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLN
NLPILRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGV
PGSEAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTF
PRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDS
LDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLS
AVTCSCQSSQLVCLRHFTDLCDCPPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKV
KEAMDPDKKSDKIELSELKELLNEAESKKFPESELLTALTTAVQDAEKCASVAQQLLSNK
QRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQTEAEELESK
EDDCDIEQLEKCIEFGDSICIELPQLTHLRQKLTQMQWLEEVKSVQEDPKSVHRDDLAKL
IEKGMIMPPHLSIENTLSELQALMLAIDDWEEKAKLYFHTKNRQTITSLEEFIREADKVE
AYLPSLDVLQDTLNKAKNWTKIMEEIQARDNFPYYNTLDDLIKKGRNIPLHLDALPILES
TLSQAKTWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKAKKSKNEDSIGPVFVCDTK
LDDSNDSATVVAAFKLAEQREMEAMRNLRERNLMKTEIDDSRYCVCRRPRFGLMLQCELC
KDWFHSNCVPLPKTSYKGKFPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPE
GEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKK
AANNPELHQRVQAIAPLSGVHSDDSVVSIADDDDDIVTIDDDEPSCSTFNSNEHAYSYIS
KIQRKTQSNDATEIAVVLSQTARLRLEELMMEGDLLEVALDETQHIWRILCHTNSPSTVR
KYASYEEVQTNLNQDIKDVKKRGRKRKSDEFELLKKLGRQKMEEKNLAKRKALQKEKKSA
SSLVPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQ
CDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEQNSTSRAPDPLAESLGLDALLSLS
QSQGYQGTDSEADIQETTSFVKTY
NT seq 4935 nt   +upstreamnt  +downstreamnt
atggtatcgaggttcgacacgaacttcggttgtgaagactttttcgggacttatcgttgc
atccaagacatggcttgtgatcgtggtgattcggacttcgagttcgtcatacctccagag
gcgccggttttcgaaccgagtatcgaagagtttcacgaccctcttggctacattgcaaaa
atacgaccgatcgcagagaagtctggcatttgtaagatcaaaccgccgcctaattggcag
ccaccatttgctgttgatgtagataaattcaaatttgttccgagaatacaaaggctaaac
gaattggaggcaaaaaccaggataaaacttaatttcttggatcagattgcaaaattctgg
gaacttcaaggttcatctttaaaaatcccccttgttgaacgcaaggctcttgatttatat
tctttacataagatagttaccgatgaaggaggaattgacacagttacgaaggaaaggaga
tgggcaaaaattgcaaataaattaggttatccttctggtcgtagtgttggaagtattcta
aaaaatcactatgaacgtattttgtatccatttgatgtgtttaaacaaggaaagacattg
gcagatattaaaattgaaccagattctaatgtaaatgagaaaaaagatagagattataaa
ccacatggaattatatcacggcaacaaattaaacccccacctgagaaattttcccgtcgt
tctaagagatttagtggtcaagaagaaaagcaggaagtatctattaaacaagaggattgt
aaagaggaatgtgattctgacaatgattgtaaagatggaattagaaataaacaatatgat
gataaagataatagtaaagaacttaaaaaattacagttttatggacctggcccaaaaatg
gctggatttaataccaaagaaggaaagaaatcgaacaaaactagaggtgtaaaacttatt
tatgaagttgacccattggcaaagtatatttgtcacaattgcggaagaggtgataatgaa
gaaagcatgcttttatgtgatggatgtgatgatagttatcatactttttgtcttatgcca
cctttgacagaaataccaaaaggtgattggagatgtccaaagtgtgttgctgaagaagtt
tccaagccaatggaagcattcggttttgagcaagcacaaagggaatatacacttcaacaa
tttggtgaaatggctgaccaatttaagagcgactattttaacatgcctgtacatatggtg
ccaacatcactagtagaaaaagaattttggcgaattgtttcctcaattgacgaagatgta
acagtcgaatatggcgcagatttacatacaatggatcacgggtcgggatttccaacaaaa
acaagcgtcaatttgtttacatgtgatcaagaatatgctgaatcttcatggaatttgaac
aatttaccaattttacgaggaagtgtattaggtcatataaatgctgatattagtggtatg
aaagttccatggatgtatgttggaatgtgttttgcaacattttgttggcataatgaggat
cactggagttattcaatcaattatctacactggggagagccgaaaacatggtatggtgta
ccaggttctgaagcggaacgatttgaacactcaatgaaatcggctgcaccagaattgttt
catagtcaaccagatttacttcatcagttagttactattatgaatccaaacattttaaca
aatgaaggcgttccagtattcagaactgatcaacacgcgggagaatttgtagtgacattt
ccgagagcgtatcacgcaggttttaatcagggttacaattttgctgaagccgtgaatttt
gctcccgctgattggctcaaaattggacgagattgcataacgcattattcaaatttaaga
cgattttgtgtattttctcatgatgaattggtgtgtaaaatgtcattggacccagactca
ttagatataggaatcgcaactgcaacttaccatgatatgcttcaaatggtagatgatgag
aagaaactacggaagaatctgttggagtggggtgtaacagaagcagaacgagaagcattt
gaacttttaccagacgatgagagacagtgtgaagcttgcaagacaacctgttttttgagt
gcagttacatgttcatgccaaagttctcaattagtttgtttaaggcatttcacagatctt
tgtgattgtcctccagataagcatacattacgttatcgctatactctagacgaattacca
attatgttacaaaaattaaaattgaaagcagagtcatttgactcctgggtaacaaaagta
aaagaggcaatggatcctgataaaaagagtgataaaatcgaattaagtgaattaaaagaa
ctgttaaatgaagccgaaagtaaaaaatttccagaaagtgaattgctcacagctttaaca
actgctgtacaagatgctgaaaagtgtgcaagtgttgcgcaacaacttttgagtaataaa
caacgtaccagaaccagacaatctgttgaaactaagtacaagcttacagtagaagaatta
acacttttctataaagaaataacaaatctgtgctgtgaactcaaggagtctgatggtgta
aaatttatacttgatcaagtattgcaatttcaaacagaagcagaagaactagaatctaaa
gaggatgattgtgatattgaacagttggaaaaatgtattgaatttggagattctatttgt
attgaactacctcaacttacacatttgagacaaaaattaacacaaatgcaatggcttgag
gaagtaaagtctgttcaagaagatccaaagtcagtacatcgtgacgatttagcaaaatta
attgagaaaggtatgataatgcctcctcatttaagtatagaaaatactctctcagagtta
caagcattaatgcttgcaattgatgattgggaagaaaaagcaaaattatatttccataca
aaaaatagacaaactattacatctctcgaagaatttattcgtgaagctgataaagtagaa
gcttatctaccaagcttagatgtccttcaagatacattaaacaaggcaaaaaattggaca
aaaataatggaagagatacaagcaagagataactttccatactataatacgctagatgat
ttaattaaaaaaggtagaaatattccactgcacctagatgctcttccgatcttagaatct
actctttcacaagcaaaaacctggaaagaaaggacagcaagaacattcctaaggaaaaat
tcacattatactttaatggaagctttatcaccacgaattggcgttggtatacaagcgtta
aaagctaaaaagagtaagaatgaagattctataggacctgtatttgtctgtgatacaaaa
ttggatgattccaatgattcagctactgttgtagctgcgtttaaattagctgaacaacgc
gaaatggaagcgatgcgaaatttaagggaaagaaacttaatgaaaaccgaaattgacgat
tcaaggtattgtgtttgtcgtcgaccaagattcgggctcatgcttcagtgtgagctttgt
aaggattggtttcactcaaactgtgtacctttaccaaagacatcgtataaaggaaaattt
ccaatgtcaagagaaattaaatttttatgtccatgttgcttacgttcacgacggccacgg
ttagaaactattcttgcacttttagttagtcttcaaaaaattcctattcgtttaccagaa
ggtgaagcattacaatgtttaacggaacgtgcaatgaattggcaggatcgagctcgacaa
gcactagccacggatgaaatttcatctgcactggcaaaattgtctgtattatcacaaaaa
ttagtggaagcagctgcaagagaaaagacagaaaagattattagcagcgaactgaaaaag
gcagcaaataatcctgaattacatcagagagtacaagcaattgccccactcagtggtgtg
cattcagatgatagtgtagttagtattgcggatgatgatgacgacattgttactatagat
gatgatgaaccaagttgtagtacattcaatagtaacgaacatgcgtattcctatatatca
aaaattcaacgtaaaacacaatcaaatgatgcaacggaaattgcggttgtactttcacaa
acagcaaggttacgtcttgaagaactgatgatggaaggcgatttattagaagttgcactt
gatgaaacacaacacatctggcgtatactatgtcatacaaatagtcctagtacggttcga
aaatatgcatcatacgaggaagtccaaactaacttgaatcaggatataaaggatgtaaaa
aagcgtggaaggaaaagaaaatccgacgaatttgaattattgaaaaaacttggaagacaa
aaaatggaagaaaagaatttagctaagcgcaaagcattgcagaaagaaaaaaaatcagcc
agttctctagttccaataaagcgtggacctcgaaagatgaaacgtaaagaaggagaagaa
ggcccaaagaaaaggggtggtaacaggaaaaagaccaaacaggatacttcagacgaagaa
gatgattgtgcggctgttaactgcttacgacctagcggtagggaagttgattgggtacag
tgtgatggtggctgtgaaggttggttccacatgcattgtgttggtttagatcgtacagaa
attgcagaggaggatgattacatatgtagtaattgtaaagaagcagagcaaaactcaacg
tcaagagcgccagatcccctagctgaatcattaggcctggatgcacttctttccctttct
caatctcagggataccagggcacagatagtgaagcagacattcaagaaaccacatccttc
gtcaagacttactag

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