Bombus vancouverensis nearcticus: 117157794
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Entry
117157794 CDS
T07628
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04519
Cadherin signaling
bvan04620
Toll-like receptor signaling pathway
bvan04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117157794
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117157794
04624 Toll and Imd signaling pathway
117157794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bvan03000
]
117157794
Transcription factors [BR:
bvan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117157794
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
RHD_DNA_bind
RHD_dimer
Ank_4
Ank_3
Ank_5
Ank_KRIT1
T4SS_AnkD
Phage_Bbp19
Motif
Other DBs
NCBI-GeneID:
117157794
NCBI-ProteinID:
XP_033191949
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MPEVYENYAVPVSENLDFYSYECDLQAMNNQGVYSPLSGSQATVSVNSPMSTTLSPLQGN
EFLTLNDTTVIGEPSITILEQPIEKFRFRYKSEMVGTHGSLAGSNSAINRHKNAPTVQLN
NFLESAIIRCTLVTSDEGSHRIPHAHRLIRRDGGHDYDDPHHITVSSEVGYTAIFHGMAI
IHTGKRHIRDELIKKMQAEALEKKKLENMKAILTTREEAQIKVDAENYQKCMNLNSVALC
FQAFILDDYGIMRPITEPVYSHAINNLKSALTGELKICRIDKHTSSVEGAEEVFILVEKV
GKKNIKIKFFELNEDDCEIWSAYGRFSELDVHHQYAIVFRTPPYKDQNITTTKEVFIQLE
RPSDGGCSEPKKFYYKPSDRIIGRKRQRISHSGSSEFSHILSSPNCIGNENTSELLSNSS
RELSKEIIKLLSEGPPTPVCKDFLKDMDVDNYLKLLVNGEENMLTTDGVSTVQCQDDVMF
AKNILIEIMHCMKMDVKNVKEHVQKLFRDRSTYGDSPLHAALRYGQRDVIKYLLMLLCTN
KDCKTLVNSQNSSGKTPLHYAVLQNQPETAKALLMLGADPNRTDEHGFSPLHAAVKIPDA
GLCVDVLLVEKGIDIEAHNDAGWTPLHLAAEAGSYDAVCSLIRAGANVNNTDMSYGRTAL
HIAVEGGHKNVVEYLLKKTNILVNKRNFSGNTALHTAVVHTGTRAKELCALLIQHGADPH
IQNHNRKSDDVDEKNESHINVKVEVDSEDENIEGTIGQSSFDLAMNKPDILQLFNDQPRE
TTSEMCSVATKLELKDENLQTSWLNDEHKKELSTLLDKTQGWQKLAKHLGVEYLLQSFQY
GSTSPSLILLNYIDVEASLSLTDIQTVLREIEEEEAADYINGISSTCS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagtttacgagaattacgcagttccagtttctgaaaatctggatttttattct
tatgaatgtgatttacaagcaatgaacaatcaaggtgtttatagtccacttagtggatct
caagcgacagtgagtgtcaattcacctatgtctactacattgtcaccattacagggcaat
gaatttttaacattaaatgatacgacagttattggagagccatctataacaatcttggaa
caacctatagaaaaatttagatttcgatacaaatcagaaatggtgggaacacatggaagt
ttagcgggatcaaatagtgctattaatcgtcacaagaatgcaccaacagtacaattaaat
aatttcctggagtctgcaataatacggtgtacacttgttacatctgacgaaggtagtcac
agaattcctcatgctcatagattaattcgtagagatggtggtcatgattatgatgatcca
catcatatcacagtatcttctgaagttggatatactgcaatattccatggaatggcaatt
atacacacaggaaaaaggcatattagagatgaacttataaaaaagatgcaagccgaagct
ttagagaaaaagaaacttgaaaatatgaaggcaattcttactactagagaggaagcacaa
attaaagttgatgctgaaaattatcaaaaatgtatgaatttgaatagtgttgcactgtgc
tttcaagcattcatcttagatgattatggaattatgaggccaataacagaacctgtatat
tcacatgctattaataatcttaagagtgcattaactggagaacttaaaatatgcagaatt
gataaacacactagtagtgttgagggagcagaagaagtattcatactggtagaaaaagta
ggaaaaaaaaatattaaaataaaattttttgaattaaatgaggatgattgtgaaatttgg
agtgcatatggacgtttctcagaattggatgtacatcatcaatatgctattgtatttcga
acaccaccatataaagatcaaaatatcacaacgacaaaagaagttttcatacagttagaa
cggccgtctgatggaggttgttctgaaccaaaaaaattttattacaaaccaagtgatagg
attataggtaggaaacgtcaacgaatatctcattctggaagttcggaattttcacatata
ctatcaagtcccaattgtattggaaatgaaaatacatcagaactcttaagtaatagcagt
cgagaattatctaaagaaataataaaattattatctgaaggtcctccaacaccagtgtgc
aaagattttctgaaagatatggatgttgacaattatttaaaattgctcgttaatggtgaa
gagaatatgctaaccactgatggcgtatcaactgtacaatgccaggatgatgtaatgttc
gctaaaaatatacttattgaaattatgcattgtatgaaaatggatgtaaaaaatgtaaaa
gaacatgtccaaaagctattcagagaccgatcaacatatggggattcgccgttacacgca
gcacttcgatacggacaacgtgatgttatcaaatacctgttaatgttattatgtactaat
aaggattgtaaaacgctggttaatagccaaaatagttctggaaaaaccccattgcattat
gctgttttgcaaaaccaacctgaaactgcaaaagcattacttatgcttggagctgatcca
aatcgaacagatgagcatggattctctccactacatgcagcagtaaaaatccccgatgct
gggttgtgtgttgatgtattactagtcgaaaaaggaatagacattgaagcacacaatgat
gctggatggacgccattacatcttgcagctgaagcaggatcatacgatgcagtatgttca
cttattcgtgccggagcaaatgtaaataatactgatatgtcttatggtcgaacagcatta
catatagctgttgaaggtggacataaaaatgtagttgaatatttactcaaaaagacaaat
atacttgtgaataaaagaaactttagtggaaatactgctttgcatactgcagttgtacat
acaggaacacgagcaaaagaactgtgtgcattactaatacaacatggtgcagatccgcat
attcaaaatcataatcggaagtcagatgatgtggacgaaaaaaacgaatcacatattaat
gtgaaagtcgaagtagattcagaagacgaaaatatagaaggaactattgggcagtcatca
tttgatttagctatgaataaaccagacattttacagctttttaatgatcaacctagggaa
accacaagtgaaatgtgctcagttgctacaaagttagaattaaaagatgaaaatttacaa
acaagttggttaaatgatgaacataaaaaagaattatctacccttttagacaaaacacaa
ggatggcaaaaacttgctaaacatttaggtgttgaatacttattacaatcatttcaatat
ggttcaacaagtccatcattgattcttttaaattacattgacgtagaggcatccctatct
ctcacagatatacaaacagtgttaagagaaattgaagaggaagaagcagcagattacata
aatggaatttcatctacatgttcataa
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