Bombus vancouverensis nearcticus: 117157812
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Entry
117157812 CDS
T07628
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117157812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvan03041
]
117157812
Spliceosome [BR:
bvan03041
]
Complex A
Other components
Complex A specific factors
117157812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
117157812
NCBI-ProteinID:
XP_033191974
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MNQSRNFTSLLNPSYLQNAQQNAATANAAAAAAAAAAAVSAAIANGTQLNSNSNSTTNNT
RKREAESDGKQEKETKEERRKRRKTRWSGSEHDKTFIPGMPTVLPTNLTPEQEKAYLFQL
QIEEISRKLRTGDLGIPLNPEERSPSPEPIYSSDGKRLNTREYRTRRKLEEERHNLIQKI
LKINPEFKPPPDYKPPIIRVHDKVMIPQEEHPDINFVGLLIGPRGNTLKSMEKETGAKII
IRGKGSVKEGKVGRKDGQPLPGEDEPLHAYITANNLDAVKKAVERIHEIIRQGVEVPEGQ
NDLRRNQLRELALLNGTLRENDGPRCTNCGASDHKSWLCPDKPNVTNNIVCSSCGGAGHI
ARDCRSKRPGQGGPAAAGMGGMGPGGDKAKIDEEYMSLMAELGEGPPPDRSKTGQPRQPN
PNPNYPGLFDRQQAPRALMAAPAHPPPQMMQGGPMMPPPGMAPPPWSQGEVNNMNGMNMQ
WQPPVSMPPPPGVMQPPPPPPGSTSQPNIPPLMPWMAGNNQPPPPGQMPPTQIPPPGMGI
PPWQQGQQGPMRPPPPGTAPPPGFPGWQPQQMGGWPPAAPVPPPPQQQTPAPPGIDLNTL
PTLLAQPPPPPPPTS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcacgaaatttcacatcgttattgaatccaagttatttgcaaaacgcccaa
caaaatgctgcgactgcgaacgcggctgctgctgcggctgcagcagctgccgcggtgagt
gccgcgattgctaatggaacgcagttgaactccaattccaattccacgacaaataacacg
agaaaacgtgaagcagaaagtgatggtaaacaggaaaaagagacgaaagaggaacgtagg
aagaggaggaaaactagatggagcggtagtgaacatgacaaaacttttataccaggcatg
cccacggttctaccaacaaacctgactcctgaacaggagaaggcttacctctttcagctg
cagattgaggaaatcagcaggaagctacgcactggagaccttggaattccacttaaccca
gaggaaagatctccttctccagaacccatatatagtagtgatggtaaacggttgaataca
agagaatatcgtactagacgtaaattggaggaggaacgtcacaatcttattcagaagatt
ctcaaaattaatccagaatttaaaccaccaccagattataaaccaccaataatacgagtg
catgataaagtaatgattcctcaagaggaacatccagatattaactttgttggccttttg
attggaccacgtggaaatacattgaaatcaatggagaaggaaactggagcaaagataata
attcgtggtaaaggttctgtaaaagaaggaaaagttggaaggaaagatggacagccttta
cctggtgaagatgaaccattgcatgcatatattactgctaataatttagatgctgtaaag
aaggctgttgaaagaattcatgaaattatacgtcaaggtgtggaagtacctgaggggcaa
aatgatttacgacgtaatcaacttagagaattggctttattgaatggaacattgcgtgaa
aatgatggaccacgttgtactaattgtggtgcatctgatcataaatcatggctgtgtcca
gataaacccaacgtaacaaataatatagtatgttcgagttgtggtggagcaggtcatatt
gcacgtgattgtagatctaagagacccggtcagggtggaccagctgctgcgggtatgggt
ggaatgggaccaggtggagataaagctaaaatagacgaggaatatatgtctcttatggca
gaattgggtgaaggtccaccacctgatcgatctaaaaccggacagcctcgtcaaccaaat
ccaaatcccaattatcctggtctctttgatagacaacaagcacctcgtgctttaatggct
gcaccagcacatccaccgccacaaatgatgcaaggtggtccaatgatgcctccaccagga
atggctccgccaccttggagtcaaggagaagtgaataatatgaatggtatgaacatgcaa
tggcaacctcctgttagtatgcctccgccacctggtgtgatgcaaccacctccaccaccg
cctggttctacatctcaaccaaatatcccaccattgatgccttggatggctggaaacaat
caaccaccgccaccagggcaaatgccaccgacacaaattccaccacctggaatgggtata
ccaccatggcagcaaggacaacaggggccaatgcgtccacctccacctggaactgctccc
cctccaggttttccaggatggcaaccgcaacagatgggtggatggccaccagcagctcca
gttcctcctccacctcaacaacaaacaccagctccccctggcattgatctcaacacttta
cctacgttattggcacaaccacctccgccacctccaccaactagttag
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