Bombus vancouverensis nearcticus: 117157991
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Entry
117157991 CDS
T07628
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvan03041
]
117157991
Enzymes [BR:
bvan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117157991
Spliceosome [BR:
bvan03041
]
Complex C
Other components
Complex C specific factors
117157991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117157991
NCBI-ProteinID:
XP_033192289
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MNTKPTFSKPGDSMWQEDKPDTEAHSSTQFVYNAHHSLALNMQRQRLPTFKYRSHIIYLL
EKYQTLVLIGETGCGKSTQLPQYLLEAGWCTDGKMIGITEPRRVAATSLSNRVADERNCI
LGTEVGYSIRFDNYTDETTKIKYMTEGILLRELMSDPLLTSYSVIVVDEVHERTLLTDII
MGLLKKIIRKRKSLRIVVCSATVDAEQLRDFFNTNTTKDSAKDTAIILTVEGRLYPVDVF
YIIEPVANYVTSVIDTALKIHENEEPGDILAFLTGLDEVDQAVSLLSEHAKLIKEGKQKL
LPLAMYGSLPNSEQLKVFWRAAKDTRKVIVATNIAETSITIPNIVYVIDCGFVKVPWYEA
ETQTNSLVIVPVSKASANQRAGRAGRVRTGKAYRLYTKEAYSELFEATPPEMQRSDLAPA
ILQLKALGIDNVLRFNFPSAPPSKNLLTGLELLYALGAIDSNGELTTPLGVTMAEMPLEP
VLAKSLIVSGEMGCSEELSTILAMLQVQNVFVRPAGGQAAIKARIAHRKFEVEEGDLLTL
LNVYTAYEKNRTLSWCQKQFLNNKALRRVTEIRTQMHSMMKKLDIPLVSANGNLQQILKC
ITAGLFPKAAYLHYTGVYKTVRGNKDLYIHPNSCLYTLQQPQWLLFYEVLQTNKTYIKDI
TVIQPEWLLELAPHFYEKTSLDPI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaaccgactttttctaaacctggtgatagtatgtggcaagaggataaacca
gatacagaagcccattcgtccacacaatttgtatacaatgctcatcattcgcttgcactt
aatatgcaacgtcaacgattgcctacatttaagtatagaagtcatattatatacttactg
gaaaaatatcaaacattagtcttaatcggtgaaactggatgtggaaagagtacgcagtta
cctcagtatcttcttgaagcaggatggtgtacagatgggaaaatgattggcatcacggaa
ccaagaagggttgcggctacatctttatctaatcgtgttgctgatgaacgcaattgtatt
ttaggcaccgaagttggttattctatacgtttcgataattatacggatgaaacgacaaag
atcaagtatatgacagagggaattctgcttcgtgaattaatgagcgatcctttgttgaca
agttattctgtaatcgtggtggatgaagtacatgaaaggacccttcttacggatattatt
atgggacttctgaaaaaaataatccggaaacgaaaaagtttacgaattgtcgtttgttcc
gctacggtcgatgcagaacagcttcgagattttttcaatacaaatacaacgaaggattcc
gcaaaagatactgcaattatacttaccgtcgaaggtagactttatccagtggatgtattc
tacattatagagccagtagctaattacgtgaccagtgtcatagatactgctttgaaaatt
cacgaaaatgaagaacctggtgatattctagcgtttcttacgggtttggacgaagtagac
caagcagtttctcttttatcagagcatgcaaagctcataaaggaaggcaagcagaaactt
ttacctctggctatgtacggatctcttccgaactcagaacaactgaaagtattttggagg
gctgccaaagacactcgtaaagttatcgtagccacgaacattgcagaaacatctatcact
attccaaatattgtttatgttattgattgtggctttgtaaaagttccatggtatgaggct
gaaactcagacaaattctctcgtaattgttcctgtgtccaaagcatccgcgaatcaacgt
gctggtcgagcgggtcgtgtccgaacaggaaaagcatatagattgtacacaaaggaagca
tactcagaactatttgaggcaacgccaccagaaatgcaacgctcggatttagcaccggcg
atcttacaattaaaagctttaggaattgataatgtattaagatttaactttccttctgct
ccaccaagtaaaaatcttcttactgggctggaattactttatgcactaggagcaattgac
agtaatggagaattaacgacaccattgggcgtaacaatggcagaaatgccattggagcct
gttttggcaaaatctcttatagtatcaggtgaaatgggatgttccgaagaattatcaacg
attttagctatgcttcaagtacaaaatgtttttgtaagacctgcaggaggccaagctgct
ataaaagcaagaatagcgcatagaaaattcgaagttgaggaaggagacttattaacgttg
ctgaatgtatatactgcttatgagaaaaatagaacacttagttggtgtcaaaaacagttt
cttaataacaaagctttacgcagagttacggaaattcgaacgcaaatgcattctatgatg
aagaaattagatataccgttggtttcggctaatggaaatttacaacaaattctaaaatgt
ataactgctggactttttccgaaagcagcgtacttgcattatactggagtatataaaaca
gtacgtggaaataaggatttgtacatacatccaaatagctgtttatatacacttcagcaa
cctcaatggttactattttatgaagttttacaaacaaacaaaacgtatataaaggacata
actgtgatacaaccagaatggttattagaattagcgcctcatttttatgaaaaaacatct
cttgatcctatttaa
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