Bombus vancouverensis nearcticus: 117158273
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Entry
117158273 CDS
T07628
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117158273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvan03041
]
117158273
Spliceosome [BR:
bvan03041
]
Complex B
Other components
Prp19-related factors
117158273
Complex C
117158273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
RRM_YTH1
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_10
RRM_3
zf-CCCH_12
RRM_PARP14_3
zf-CCCH_PARP12
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
117158273
NCBI-ProteinID:
XP_033192869
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MATSKTTNMYNRQNWEDAEFPILCQTCLGDNPYIRMTKERYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDSEIGKIDPTSPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYVGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTVSAAEATREILEPVPGLPGALPPPPESMGNNFFNLQTTPGMMPPMMIPPP
PVAPQFMFPPQMAAATATPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcaaagacaacgaatatgtataataggcaaaattgggaagatgccgaattc
ccaatattatgtcaaacttgtttaggtgacaatccgtacattcgtatgacaaaagaaaga
tatggaaaagaatgcaaaatatgcatgcgtccatttacagtatttaggtggtgtcctggt
gcaagaatgcggttcaaaaagacagaagtttgtcagacttgtagtcgcttgaaaaatgtg
tgtcagacatgtttacttgatttagaatatggtttaccaattcaagtacgcgatgcagca
cttaagatcaaagatgacttgcccagatcagatgtaaacaaggaatattatgtacaaaat
atagacagcgaaattggaaaaatagatcccacatcaccagcaggtgctgttggtaaatct
gcagctgctagtgatctgttgatgaagctggcaaggactagtccttattacaaaagaaac
aggccacatatttgttctttttgggttaaaggagagtgtaaaagaggagaagagtgtcca
tatcgtcatgagaaacctactgatcctgatgatccattagctgatcaaaatatcaaagat
cgttattacggagttaacgaccctgttgctgataaattaatgcgccgagctgcagctatg
cctaagttagacccaccagaggataaatccattacaactctctatgttggcaacttaggt
gatgttttaacagaaaaacaattacgcgatcatttctatcaatacggtgaaatacgctcc
gttactatggttcctcgtcaacagtgtgctttcattcagtacacacagagaagcgccgcc
gaagcagcagcagaaagaacatttaacaaactaatattaggagggcgaagattaacaatt
aaatggggacgttcacaaggaaggcaaactgtatccgcagcagaagcaactagagaaatc
ttggagcctgtgccaggtttaccaggtgctctaccacctccaccagaaagcatgggaaat
aattttttcaatctacaaactactcctggcatgatgccaccaatgatgattccacctcca
ccagttgctccccaatttatgttcccacctcaaatggcagctgccactgcaacacctatt
tttccacctggaacaactccaatacattatccaagtcaagatccatcaagaatgggtgcg
tctcaaggcataggaaaaccttggcccgaagaatag
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