Bombus vancouverensis nearcticus: 117158276 Help Entry 117158276         CDS       T07628                                  Name (RefSeq) protein trachealess isoform X1   KO K09098   neuronal PAS domain-containing protein 1/3 Organism bvan  Bombus vancouverensis nearcticus Brite KEGG Orthology (KO) [BR:bvan00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:bvan03000]     117158276 Transcription factors [BR:bvan03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     117158276 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PAS_3 PAS_11 bHLH_HIF1A PAS PAS_9 HLH PAS_4 Motif Other DBs NCBI-GeneID:  117158276 NCBI-ProteinID:  XP_033192881 LinkDB All DBs Position Unknown AA seq 1000 aa AA seqDB search MHRGGGVAGSGAGGAAGIAGGSAGSGALPSTSHRGLELEHPSAMPGAPGFHWGAMLAGHH AAAAASMMQPPLSAAGEYTPAPAHHGPTHPAMPMDLHVHQGFPYYRYRDDALCWTDRKPS MDDVGNPTSVNARFDERHYAFESILELRKEKSRDAARSRRGKENFEFYELAKMLPLPAAI TSQLDKASIIRLTISYLKLREFSGHGDPPWNRDGPPPNKSGKGANRVRSSASATMEHFDV HQGTHILQSLDGFAMAVAADGRFLYISETVSIYLGLSQVEMTGSSVFDYVHQQDHAEVAE QLGLGLTSSTSSGPHSSSSGLASPSSAASEEHGSSSTANPDVSSVMSLSANNLYKGYDRA FCVRMKSTLTKRGCHFKSSGYRVVLLLCRLRPQYTFGHSRKSAPPLIGMVGLAIALPPPS VHEIRLEADMFVTRISFDFRIAHCEPRVSELLDYTADELTGKNLYTLCHGEDANRLRKSH IDLIHKGQVLTHYYRLMNKSGGYTWLQTCATVVCNSKNAEEQNIICVNYVISGREFENLI MDCCQLEEGVMGVKREDAAGNDPENGSPDADRGEGRNHGGPPNQHQEHPHRSPPEDREDT RGSESEKRGSRHHDNIAQLQQEPQTAVGNINTLVVKLRGHKRKLHEDDSSSIEEEDEEDD STVKVTNNERSHALSPAPSNHSISGGEQVLCSASPKSRRVEDRTSNADSTGTSVKDLEQA MSKHLPVQNLNKSHSPTLHQPTDFSTDALLKQQQQRSTIQWIGAHHHLGHLSPQQSTTAP LPASALLRQLYANRESVIRANVHGITSSSTTRTSSSGGTYYAGDTTPSGPLPTPPGSEGS STYGEHQFVLATHNQKNSTGTSCADAFTSLVSSYSTASGYTVDYHSAMTPPSSVSPRDKQ QQQQQQQLHPVNVISSYEGSSAYSDPVLRHQYEPAQPLPLKPQVYSAAVHPSALDAAAAY ASAGLSEQAQFYHHPAAGAGFHIYHPTNKSTTNGWYSSTS NT seq 3003 nt NT seq  +upstreamnt  +downstreamnt atgcaccgcggcggcggtgtcgccggaagcggtgctggtggagccgccggtatcgccgga ggatctgccggaagtggtgcgttaccctcgacgagtcaccgcggcctcgaactggaacat ccgtcggcgatgcccggtgccccgggttttcattggggggcgatgctcgccggccaccat gcggctgccgcggcgagcatgatgcagccacccctgtccgcggccggtgagtacaccccc gcaccggcacaccatggccctactcatcctgccatgcctatggaccttcacgttcaccag ggattcccttactacaggtatcgagatgacgctctctgttggacagacaggaaaccgtcc atggacgacgttggaaatcctacctctgtcaacgcacgatttgacgagagacactacgct ttcgaaagcatcctcgagctgcgcaaggaaaaaagcagagacgctgccaggtctcgaagg gggaaggagaacttcgagttctacgagttagcgaaaatgctgccattaccggcggctatt acctcccagttggacaaagcctctataataaggctaaccatctcgtacctcaaacttcgg gagttctcgggtcacggagacccgccatggaatcgggatgggccaccgccaaataaatct ggcaaaggtgcgaatcgtgtgaggtcatcagcatccgctacgatggagcacttcgatgta catcagggtacccacatacttcaatcgttggacgggttcgcgatggcggtcgccgctgat ggacggttcctgtacatatccgagaccgtctcaatttaccttggactctcacaggtagag atgacgggatcaagcgttttcgattacgttcatcagcaagaccacgcggaagtcgcggaa caattaggcctgggactgacatcgagcacctcttccggtccacactcgtcgagctccggt ttagcgtcgccgagtagcgcggcgtccgaagaacacggttcatcttccaccgcgaatccc gacgtgtcgtcggtgatgtcgttatcggcaaataatctttacaagggatacgatcgtgcg ttctgcgtgaggatgaaatccactttgacgaaaagggggtgccattttaagtcgtctggt tatagggtcgtgttattactgtgccgtttgagaccgcagtatacgtttggccattcaaga aagtctgcaccaccattgataggcatggttggcctggcgatcgcacttcctccgccaagt gtgcacgaaattcgcctggaagccgacatgttcgtcacgcggatcagtttcgactttcgg atagcgcattgtgaaccaagggtgtccgaattattagattatacagccgacgaattaacg gggaagaatctttatacgttgtgccatggggaagatgcgaatcgtcttcgaaaatctcac atcgacttgattcacaaggggcaagtgctaacacattattatagattaatgaataaaagc ggaggatacacatggttacagacgtgcgccacggtagtgtgcaattcaaaaaacgcggaa gagcaaaatatcatctgtgtcaattatgttataagtggtcgagagttcgaaaatttaatc atggactgttgtcaactggaagaaggcgtgatgggcgttaaacgcgaggacgcagctgga aacgatccagaaaatggatcaccggatgccgatagaggagaaggaagaaatcacggtgga ccaccgaaccagcatcaagaacatcctcacaggtcgccgcctgaagatcgcgaagatact cgcgggtcggagagcgagaaacgaggcagccggcatcacgacaacatagctcagttacag caagagccgcagacagcggtaggaaacattaacacgctcgtagtgaaattacgtggacac aagcgaaagctgcacgaggacgatagcagctcgatcgaggaggaggacgaggaggacgac tcaacggtgaaagtcacgaataacgagagaagccacgctctaagtccagctccatcaaac cattccatttcaggaggtgagcaagtactgtgctcggccagtcctaaatcgagacgcgtg gaagatagaacgagcaacgccgacagtaccggcacctccgtgaaagatctagagcaggcg atgtccaagcatctgccagttcagaatctcaataaatctcattcaccgacgctgcatcag cctacggatttcagcacggacgcgttgctcaagcagcaacagcaaaggagtacgatacaa tggatcggagctcatcatcatctgggacacctaagtccgcaacagtcgactaccgcgcca ttgccagcgtccgctcttctacgacaattatacgccaacagagagagcgtgatacgagct aacgttcacggaatcacgtccagtagtactacaagaacctcttcttccggtggaacctat tacgccggggacacgacacccagtggtcctctacccactccacctggctccgaaggatcc agcacctacggcgaacatcaatttgtgttggcaacacacaatcagaaaaattccaccgga acaagttgcgccgatgcgtttaccagcctggtttcctcgtattctaccgccagcggttac acggtcgattatcactcggcgatgactccgccgtcatccgtttcaccgagagacaagcaa caacaacaacaacagcaacagctgcatccggtaaacgtgataagcagctacgaaggctcg tcggcttatagcgatcccgtgttacgacaccaatacgagccagcgcaaccattgccttta aaaccacaagtgtattcggctgctgttcatccgagcgcgttggacgctgctgcagcgtat gcctcggccggtttaagcgagcaagcgcaattttatcatcacccggctgccggagctggt ttccacatttaccatccgacgaacaagtcgacgacgaacggttggtacagttcgacatcc tag

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