Bombus vancouverensis nearcticus: 117158598
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Entry
117158598 CDS
T07628
Name
(RefSeq) protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117158598
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117158598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
117158598
NCBI-ProteinID:
XP_033193566
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MKWSPGALFCEQVGELTRVFSQWNECEQTVVLYALLRRIPAVQARFLAQAVQHSLHSVSE
LDSQELNANNPAFINSLLSESTEIAINQLLTHLPLLRPGNIECKQCYLVAIPELVSHCVT
TGQFTEQTQQLLSYCLIHPAITSQDRRSLTQWLRHLEERISGTPPIHSLEEYTSTTIRWD
NAWQRNSKQQSEQTSLFGTQSGTAFNLQFPPPVTRQRRSNSLTPPVAPSHHLEVVDRSNN
INCTTKHKPRSFSVSGDHTSNLIGLGPLSPQSSCASSGSEGRLDETSTRSLASGMRDVPS
WLKTLRLHKYSYLFVTLSYEEMLQLTEEQLAEQGVTKGARHKLALSIAKLQQRYTTLLNL
EKDLLQPTRDNTQSASFLQGPTVLINTIDELKIILATPMKPSQENDLQDIPAQFTKVLGK
LCSRLALDSVDDGILCACINILEKVLQHDCFTPNQKEKVQQWRSRLGNPRPTPKWQHNYG
YNNRRYCNPQQHNRKPSLNLGHVHNTHPQNNSFVVSTHRNSISTPYLQNNQNQSVNQNTL
RPVHATKKRPSLQESSLQQLQRTLQRTYSAPRDHFLSPSSNNASETTEPEINSRLESLCL
RMTEQAIGGFGEA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtcacccggtgctctattctgcgaacaagttggtgaattgactcgagttttc
tcacaatggaatgaatgcgagcaaactgtagttttatatgcactacttcgtcgcattcct
gcagttcaagcaaggtttcttgcacaagcagtgcagcattccttgcactctgtttctgaa
ttagactcacaggaactaaatgctaataatccagcatttattaactcattgctatcagaa
tcaacagaaattgctataaatcaacttttaacacatttgccattattaaggcctgggaat
atagagtgcaaacaatgttacttagtagcaataccagaattagtaagccattgtgtaact
acagggcaatttaccgaacaaactcaacaactgttaagttattgtttgattcatccagct
ataactagtcaagatagacgttctttgactcagtggcttcgacatcttgaagaacgtatt
agtggtacaccaccaatacacagtctcgaggagtacactagtactactattagatgggat
aatgcatggcagcgaaattctaaacagcaaagtgaacagacaagtttatttggcacacaa
tcaggcactgccttcaatttgcaatttcctccacctgtaactcgtcaacgacgatcgaac
agtttaacaccacccgttgctccatctcatcatctagaagttgttgatcgcagtaacaat
ataaattgcacaactaaacataagccacgaagcttcagcgtatctggggatcatacaagc
aatcttattggattaggcccactgagtcctcaaagttcttgcgcaagtagcggcagcgaa
gggcgtttagatgaaacatctactcgatcgcttgctagtggtatgagagatgtcccatca
tggcttaaaactttacgccttcataaatatagttatctgtttgttactctcagttacgaa
gaaatgcttcagttaactgaggaacaattagcagaacaaggcgtgacgaaaggggcccga
cataaattagccctttctatcgcaaaattgcaacaacgctatacaacacttctaaattta
gagaaagacttattacaaccaactcgcgataatacacaatcggcttcgtttttacaaggt
ccgacagtattgattaatacgatcgatgaattaaaaattatcttagctactcccatgaaa
cccagccaagaaaatgatcttcaggatatacctgcacaattcaccaaggttcttggaaaa
ctgtgtagccggttggcactggatagcgtggatgacggtattttatgcgcttgtattaac
atattagagaaagtattgcagcatgattgctttactccaaatcaaaaggagaaggtacaa
caatggcgcagtagacttggaaatccacgaccgactccaaaatggcaacataattatggc
tacaataatagaaggtactgtaacccccagcagcacaatagaaaaccaagtttaaactta
ggacacgtccataatacacatccgcaaaacaattcttttgtggttagcactcacagaaac
agtatatctacaccatatttacaaaataatcagaaccaaagcgtaaatcagaatacttta
cgtccagtccacgcgaccaaaaagcgacctagtttacaagaatctagtttacagcagtta
caaagaacgttacaacgcacatacagtgcaccgagggatcattttcttagcccgagtagc
aacaacgcatccgaaacaacggagccagaaatcaactctcgtctcgaatctctttgttta
agaatgacggaacaagcaatcggtggtttcggtgaggcctaa
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