KEGG   Bombus vancouverensis nearcticus: 117158603
Entry
117158603         CDS       T07628                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117158603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bvan04131]
    117158603
Membrane trafficking [BR:bvan04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    117158603
SSDB
Motif
Pfam: Vps35 ApoLp-III
Other DBs
NCBI-GeneID: 117158603
NCBI-ProteinID: XP_033193618
LinkDB
Position
Unknown
AA seq 852 aa
MSMIITYTSIYIQFIWSVSLSAVGVSSAGNKCRVFFKKKKMVSLFFSQPMTPAITGVEEQ
EKLLEDAIGVVKVQAFQMKHCLDKSKLMDALKHAATMLGELRTSLLSPKSYYELYMAITD
ELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLITVGLVYIKTTPGLKRDLLRD
LVEMCRGVQHPLRGLFLRNYLLQCTRNILPDVAEEDDEDGSVRDSIDFVLMNFAEMNKLW
VRMQHQGHTRDRERREREREELRILVGTNLVRLSQLESVTLEKYKKRVLPGILEQVVSCR
DAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVNVKNIIISLIDRLAAFSQRSD
GVGGPGSPNQVPGIPQDVKLFDVFSDQIAIIIQTRQDMPPEDIVSLQVALINLAHKCYPD
RVNYVDKVLLTTVQIFQKQNVDKLEYNSAVSRELVRLMKIPIDNYKNILTVLKLEHFAPL
LDYFDYEGRKLLAIYIITNILENETLIPTQEQVDAVLSMVSPLVQDQPDQPNIEEDPEDF
AEEQGLLGRLIHHFKSETADQQYMILSAARKHFSAGGNKRIKYTLPPIVFQAYQLAFTYK
GLKDQDEMWQKKCQKIFQFCHATITALMKAELAELPLRLFLQGAIAIGEIRFDNFEMVAY
EFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFCEENAEPIRNQCVLYASKLLRKP
DQCRGIAICSHIFWSGKSLATGGKEMQNKSRVLECLRKGIKIANQCMDTSVQVQLYVELL
NHYIYFYEKDNTTFTVDIVNQVIAKIKEELPNLEVSEETEQIQKHLANTLEHLRNRMESP
ETDGLSYQGLVL
NT seq 2559 nt   +upstreamnt  +downstreamnt
atgtccatgataattacatatactagtatatacatacagttcatatggagcgtgtcactt
tcagcggtgggtgtttcaagtgcgggaaataagtgtagagttttttttaagaaaaagaaa
atggtatctttatttttctcgcagccaatgacacctgctataacgggagtagaagagcaa
gaaaaactacttgaagatgcaattggtgtggttaaagtacaagcttttcaaatgaaacac
tgtttggacaaatccaaattgatggatgcattaaaacatgcagctacaatgttaggagaa
cttcgaacatctcttttaagtccaaaaagttactatgaattatacatggctattactgat
gaactaagacatttagaactttatttgttagatgaatttcagaaagggagaaaagttacg
gatttatatgaattagtgcaatatgttggaaatattgtacccagactgtatctacttatc
actgttggattagtatatatcaaaacaacacctggattaaaaagagacttattaagagat
ttggtagaaatgtgtagaggagttcagcatcctttaaggggtctctttttaaggaattat
ctactacagtgcactcgtaacattttaccagatgttgctgaagaagatgatgaagatgga
agtgtccgtgacagtatagactttgtcttgatgaattttgctgaaatgaataaattatgg
gtacgcatgcaacatcaaggtcatactagagatagagaaagaagggaaagagaaagagaa
gaacttagaatattagtgggaactaatcttgtacgacttagccagttggagtcagttact
ttagagaaatacaaaaagcgtgttttaccaggcattctagaacaagtagtcagttgcaga
gatgcaattgctcaagaatatcttatggagtgcataatacaagtttttcctgatgaattt
catctacaaactttaaatgcatttttaaaatcttgtgctgagttgcagaatggtgtaaat
gtaaaaaatataattatttcgttaatagaccgtcttgcagcatttagtcaaagatcagat
ggtgtgggaggaccaggaagtcctaatcaagtgccaggaattccacaggatgtaaaactt
tttgatgttttcagtgatcagatagctataattatacagactagacaagatatgccccca
gaggacatagtttctcttcaagtagccctcattaatttagcacataagtgttatcctgat
agagtaaactatgtggataaagttttgttaacaactgttcaaatattccaaaagcagaat
gtagataagcttgagtataatagtgctgtatcaagagaattagtgagactaatgaaaatt
ccaatagataactataaaaacatcttaactgttttgaagcttgagcattttgctccatta
ctagattactttgactacgaaggcagaaagttattagctatttatataataacaaacatt
ttagaaaatgagactttaataccaactcaagaacaagtagatgcagttctttctatggta
tctccattggtacaagaccaaccagatcaacccaatatagaagaagatcctgaagacttt
gcagaagaacagggtcttcttggtagattaatacatcattttaagtctgagacagctgat
caacaatatatgatattaagtgcagccagaaaacattttagtgctggtggaaataagaga
ataaaatatactctaccaccaattgtatttcaagcttaccaacttgctttcacatataag
ggattaaaggatcaagatgaaatgtggcagaaaaaatgtcaaaaaatctttcaattctgt
catgcaactattacagctttaatgaaggcagaactggccgaactgccattgagattattt
cttcagggtgcaatagcaataggagaaattcgttttgataattttgagatggttgcttat
gaatttatgagtcaagcattttcaatatatgaagatgaaataagtgattctaaggcgcag
ttagcagctattacattgatcattgctacatttgagcaaatgagttgtttttgtgaagaa
aatgcagaaccaatacgcaatcaatgtgttttatatgctagcaaattattaagaaaacca
gatcaatgtagaggaattgctatttgctctcatatattctggtctggaaaatcattagca
actggtggaaaagagatgcaaaataaatctagggtattagaatgtttaagaaaaggtatc
aaaattgcaaatcagtgcatggatacttcagttcaagtacaattgtatgtagaactatta
aatcattacatttatttctatgagaaagacaatactacgttcactgttgatattgtaaat
caagtgatcgcaaagattaaagaagaactccccaacctagaagttagtgaagaaacagaa
caaattcaaaaacatttagctaatacattagaacatttaaggaatagaatggaatctcca
gaaacggatggtctatcgtatcaaggacttgttctttaa

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