Bombus vancouverensis nearcticus: 117158830 Help Entry 117158830         CDS       T07628                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism bvan  Bombus vancouverensis nearcticus Pathway bvan04140   Autophagy - animal bvan04142   Lysosome biogenesis bvan04145   Phagocytosis bvan04148   Efferocytosis Brite KEGG Orthology (KO) [BR:bvan00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     117158830    04142 Lysosome biogenesis     117158830    04140 Autophagy - animal     117158830    04148 Efferocytosis     117158830  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bvan04131]     117158830 Membrane trafficking [BR:bvan04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     117158830 SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C VPS18_solenoid_2nd TPR_Vps41 Clathrin Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 Zn-C2H2_12 AP_endonuc_2 B129_C2H2-zf Beta-prop_WDR36-Utp21_1st Motif Other DBs NCBI-GeneID:  117158830 NCBI-ProteinID:  XP_033194055 LinkDB All DBs Position Unknown AA seq 882 aa AA seqDB search MHDAYEETLILNISVQIESMAAYDDNLLIGTREGHLLMYNVPSVLDDNHKLELLRHSKNF NKKRITQIDVVPEYNLLIILTDNIVCIHDLNSPNFQQLYQLQKTRGATLFALDIKPNQIV NGENQTVVHLCVAVKRKLQLYNSRGKKFETFNGFELTVPDIPRELCWCGETLILGFRGLS YTTLNLNGKTKELFPTGKSPEPSVTKLSDNSFVLGKDSQSFVMDTRGELIQHNPVKWSDT PSALAWDDPYLLGIVHDRLEVYTIEGCLHIQTIKDLNKARLIYRCKQGKVFVASISHVWC VRAVDVTHQIRTLLEQTQFQLAIKLTSLSDITEEEKHKQIYKIQTLYAHHLFRNKRFQEA MDQFLKIGTDPYEVIMLFPDLVTPSSSNPEVSDPTLPKLQDHDLEKGLRALIIFLTEVRY KLMGGNAKSKDKDNNEEKSVVNGKKNMTAVATEQLLKIIDTTLLKCYLQTTDALVAPLLR LNHCHLAEAEKTLLMHQKYPELIILYQTKGQHRKALELLEKHAKENDSSLKGTARTIQYL QQLGKDHMDLILKFAGWVLNEDPEQGLRIFMEDMQQVELLPRPKVLDYLLCHHKDLVITY LEYVVHVWEDTNPLFHNVLIHQYKEKCLACMSENATPAEKQTAQHIRQKLQQFLEKSTHY TPETILVHFPFDNLFEERAIILGRLGRHQQAISIYISLLNDIAKATEYCYNVYTRYQNQE IVDKQKQSDGADEVYVMLIQQLLKPDDKGVLITGCIPEMQRTAEPDLEMALELLEKHASK INPLKALELLPDTVPIGRIRYFLEVSLQEKLNTARRIQVLKGLLYAELLQVQEQRMHYES QSVLMTEFNICPVCKKRFGNQSAFARYPNGDIVHYSCQDRKA NT seq 2649 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgcttatgaagaaaccttaatattaaatatttctgttcaaatagaatctatg gctgcgtacgatgacaatttactgattggaacaagagagggtcatcttcttatgtataat gtaccatctgtattagatgacaatcacaaattagaattgttacgtcatagtaaaaacttc aataaaaagcgtatcactcagatagatgttgtaccagagtataacttgcttataatttta acagataatatagtatgtattcatgatttaaactctccaaactttcaacaactttatcaa ttacaaaagactcgtggtgccacattatttgctttagatataaaaccaaatcaaattgta aatggtgaaaatcaaacagttgtgcacttatgtgttgctgtgaaacgtaagctacaatta tataactcaagaggaaaaaaatttgagacatttaatggttttgaattaactgtgccagat attccacgtgaattatgttggtgtggtgaaacattaattttgggttttcgtggattatca tacacaactttgaatttaaatggaaaaaccaaagaattatttccaactggaaaatctcct gaaccaagtgttacaaaattgtctgataattcctttgtactaggaaaagactctcaatca tttgttatggataccagaggagaactgattcaacataatccagtaaaatggtctgataca ccaagtgcattagcttgggatgatccttatttacttggaattgttcatgacagattagaa gtatatactatagagggttgtctgcatattcaaacaataaaagatctaaacaaagctagg cttatatacagatgcaaacaagggaaagtttttgtagcatcaattagtcatgtttggtgt gtgagagcagttgatgtaacacatcaaattagaacattactagagcaaactcagtttcag ttagcaataaaattaactagcttatccgatataacagaagaagaaaaacataaacaaata tataaaattcaaacattgtatgctcatcatctgtttcgtaacaaaagatttcaagaagca atggatcagttcttaaaaataggaacagatccttatgaagtgataatgttatttcctgat ttagttacaccatctagcagtaatcctgaagtcagtgatccaactttgcctaagctccaa gaccatgatttagaaaaaggtctacgtgcattaataatttttcttactgaagttagatat aagttaatgggcggtaatgcaaaatccaaggataaggataacaatgaggaaaaatctgta gtgaatggaaaaaagaatatgacagcagtagctacagaacaattattaaagattatagac acaactctgttaaaatgttatctacagactactgatgcattggtagcaccattactcaga ttaaatcattgtcatttagcagaagctgaaaaaactttattaatgcatcaaaaatatcct gaacttattatattatatcaaaccaagggacaacatagaaaagcattggagcttctggaa aagcatgcaaaagagaatgattctagtctaaaaggcactgcaagaacgatacaatatttg cagcaacttggtaaagatcatatggatttaattttgaagtttgctggttgggttttgaat gaagatccagaacaaggacttcgaattttcatggaagatatgcagcaagttgaactatta ccaagaccaaaggtattggattatcttctatgtcatcacaaagatttagtgataacatat ttggaatatgtagtacatgtttgggaagatactaatcctttgttccataatgttttaata catcaatacaaagaaaaatgtttagcgtgtatgagtgaaaatgctacaccagccgaaaaa caaacagcccaacatataagacaaaaattgcaacaatttttagaaaaatctacgcattat actcctgaaacgatattagtacattttccatttgataatttgttcgaggagcgtgctatt attcttggaagacttggacgtcatcagcaagctatttcaatatatattagtcttcttaat gatatagcaaaagcaactgagtattgttataacgtatatactagatatcaaaatcaagaa attgtagataaacaaaaacaatccgatggagctgatgaagtctatgtaatgcttattcaa caattgttgaaacccgacgataagggagttttaatcacaggatgtatcccagaaatgcaa agaacagcagagcctgatttggaaatggcacttgagctgcttgagaagcatgcatcaaag ataaatccactaaaggcattagagcttctgcctgatacagttcctataggtagaatcagg tactttttagaagtcagtttgcaggaaaaattaaacactgcaagaaggatacaagtatta aaaggattactttacgctgaactcttgcaagtacaagagcagcgtatgcattatgaatca cagagcgttcttatgacggaattcaatatatgtccagtatgtaaaaagagattcggcaat cagagtgcgtttgcgaggtatccgaatggcgatattgtacattattcgtgtcaagatcgt aaggcataa

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