Bombus vancouverensis nearcticus: 117158997
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Entry
117158997 CDS
T07628
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117158997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvan03009
]
117158997
Ribosome biogenesis [BR:
bvan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117158997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_NUP159_NUP214
WD40_Gbeta
Beta-prop_VPS8
Tricorn_2nd
SGL
RAB3GAP2_N
Beta-prop_SCAP
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
117158997
NCBI-ProteinID:
XP_033194340
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MSTCKIHNIRFYNLEPRSVTCLSYECKTKKLALARNDNSIEVWNVGNAPFVECTIPGHPE
NSIENILWIGPRLFSTGLHGMITEYDLTTLSIKSEVAVTGGAAWCMDVNHKKTCLAVGTE
DGYINTFSVTPHSLIYERIFDKQKGRILCIKWDNTGEMIYTGSVDTIRVWNAVSGHAIHK
MTTSRKEAKKETIIWCLAVTDDNIIISGDSRGYLSFWDPHMGTLIESHESHTADILAVTL
SHDMNIVYCAGVDPVVRSFCKITMKSSGRPQWVKGIERRLHAHDVRALVDADGKLYSAGV
DGYLAQSSYPPKILVKYPPLLQLPCATVCRKSRCILLQYTNFLELWRLGSPTKVSSESIR
PGMVHQLEEEPIKLLQLKTKRNEHILSCAINKDAKTIVYSTDDHVRVFNFDVIEGDAQLS
RNDTDISATRIQKMLFSPNGKLFVTINNDEKNSTITLYKVEKKHLRHLGFFYTNKESIIS
VGLVCFSPDSKFFVCADRQGRIAVYNVSDTTNNDGPVAWLLPKYSCPPTAMAIQKDTLNL
VIVYSDHKIIEYNILQRQYTKFSNNLQSRLPKQWLARPFPITNIIFDPRNENIIIMHDDS
TVYVIDKLNEFSEKETKILKRENGDTTEDNNSVINSQQVFQVLKKYKHLVYLDWLTDEEL
VAVEVNPISLTEKLPPTLKQKWFGM
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttgtaaaatacataatattaggttttacaaccttgaaccccgatctgttact
tgtttatcttacgaatgtaagacgaaaaaactagcacttgcgaggaatgataattcgatt
gaagtttggaatgttgggaatgcaccttttgtggaatgtacgatacctggtcatccagaa
aattccatagaaaatattctgtggataggtccaagattgttttcaaccggtcttcatggc
atgataacagaatatgatttaacgacattatctatcaaaagcgaagtagcagtgactgga
ggtgcagcctggtgcatggatgttaatcataaaaaaacatgtttagctgttggtacagag
gatggatatatcaatacattttctgttactccccattcattgatatacgaaaggatattt
gataaacagaaaggaagaatcctttgtattaaatgggataacactggagaaatgatctat
acagggtctgttgacacaattagagtttggaatgctgtatctggtcacgcgattcataaa
atgacaacttctagaaaggaagcaaagaaagaaactattatctggtgtttagcagttaca
gatgacaacatcataatttctggagactcacgtgggtatttatcattttgggatcctcac
atgggtaccctaatagaatcccatgaaagtcatacagctgatatattagctgttacttta
tcccatgacatgaatattgtatattgtgctggtgttgaccctgtagtgagaagcttttgt
aaaataactatgaaatcaagtggtaggccacaatgggtgaaaggaatcgaaagaagatta
cacgctcatgatgtaagagccttagtagatgctgatggaaaattatattcagctggtgta
gatggatatctagcccagtccagttatccaccaaaaattctggttaaatatccgccatta
ctacagcttccatgtgctacagtttgtagaaaatctagatgtattcttttacaatataca
aactttcttgagctatggaggcttggatcacctactaaagtatcttcagaatcaatacgt
cctggaatggtccaccagttagaagaggagcctataaaattgctgcaattaaaaacaaaa
agaaacgaacacatcctttcttgtgctatcaacaaggatgccaaaacaattgtttattca
accgatgatcatgttagagttttcaactttgacgtgatcgagggagatgcacaattatca
agaaatgatacggacatttctgcaaccagaatacaaaaaatgttatttagtccaaatgga
aaattatttgtaacaataaataacgacgaaaaaaatagcactataacattatataaagtg
gaaaagaagcatctgaggcatcttggctttttttacacaaataaggaatctattataagt
gttggactagtgtgtttttctcccgatagtaaatttttcgtttgtgctgatcgtcagggt
aggattgctgtatataatgttagtgacactacaaataacgacggacctgtcgcatggttg
ttacccaaatacagttgtccaccaacagccatggcgatccagaaagacacgttaaattta
gttatagtatattccgatcataagattatcgaatataacatattacaaagacaatacacc
aaattctcgaacaatttacaaagtcgacttcccaagcaatggttagcccggccattccct
ataacgaatattatttttgatccacgtaacgagaatatcataataatgcacgatgactcg
acagtttacgtaattgataaattgaacgagttctcggaaaaagaaacgaaaattttaaag
cgcgagaatggcgacaccaccgaggacaataattctgtgataaattctcagcaagttttt
caagttcttaaaaaatacaagcaccttgtatacttggattggttgaccgacgaagaatta
gtagcagtcgaagtaaaccccatatccttgacggaaaagttaccgccgactctcaaacaa
aaatggtttggaatgtaa
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