KEGG   Bombus vancouverensis nearcticus: 117159039
Entry
117159039         CDS       T07628                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117159039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bvan03021]
    117159039
   03036 Chromosome and associated proteins [BR:bvan03036]
    117159039
Transcription machinery [BR:bvan03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117159039
   Coactivators
    SAGA/TFTC/STAGA complex
     117159039
Chromosome and associated proteins [BR:bvan03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     117159039
    STAGA complex
     117159039
    TFTC complex
     117159039
    SAGA complex
     117159039
    SLIK complex
     117159039
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 EIF3I TFIID_NTD2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 CFAP251_N ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th NBCH_WD40 DSE1_N Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_WDR41 Tricorn_2nd Beta-prop_VPS8 Beta-prop_DCAF12 ASA1 Beta-prop_DCAF4 Cytochrom_D1 WD40_like RMC1_N TRM82_WD Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Beta-prop_ELP1_1st CTLH WDR54 Cas_TM1802_C DUF7145 TP_0598_N DUF7165
Other DBs
NCBI-GeneID: 117159039
NCBI-ProteinID: XP_033194415
LinkDB
Position
Unknown
AA seq 589 aa
MKRLKSELINATIESYLKRRHYQTSDIFCKGNQIHCRTSDEMTLSATAASATSQDNSIIF
SAISIDVTAADQAYQRLKMWVNIVLDDKLKMELKGLLYPVFCHLYLEMLHTGNRQAAIQF
LKSHQNEFNSETEKDFLEELSSVFSVQDIELRPLVNSFRTRKYKVDMSDVAHLCLQQFLS
KHGHIILMQIINTHVTIIKKMDVPETDTEGCEDASIRSEVGINGYVEQPSGTGADREMRE
LQEAIRLIRNNAHQPLRIFAVNNAVENASSGAIPPNMDKLAVGFSTTEIRLWGINETVLI
KPKYEEPSFTFASDIPFLHKFYDTSDEMIEGGAVILRGHTDIVHDLRFIPESDILLSVSS
DKDMRAWRLNDYTCAAIYSGHNYPIWCMDLSVFNLYVATGSHDRTAKLWSLDRIFPLRIF
AGHFLDINCVKFHPNARYLATGSADKTVRLWDKDDGNLLRVYIGAQSTIYSLAFSPDGKY
LAAAGDDKSISIWDLSTNALLTELKGHEDTIMNLDWSCDGQYIASGSLDGTIRLWPTHDH
VKIVNSNSSSLVPETESPQIFSTYCSSILSLRYYNKNNSLVCIGTVDNL
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgtttaaagagtgaattaattaatgctacaattgaatcatatttaaaacgacgt
cattatcagactagcgacattttttgtaaaggcaatcaaatacattgccgaacaagtgat
gaaatgactctgagtgcaactgctgcttctgccacttcccaagataattcaatcattttt
agtgccattagcattgatgttactgctgcagatcaagcgtatcaacggttgaagatgtgg
gtaaatattgtactcgatgataaattaaaaatggaattaaaagggcttctataccctgta
ttttgtcacttgtatttagagatgctacatactggtaacaggcaagcagcaattcaattt
ctaaaatcacatcaaaatgaattcaacagtgaaacagagaaagattttttagaagaacta
tccagtgtattttcagtacaagatattgaattaagacctttagttaattcatttagaact
agaaaatataaagtggatatgtcagatgttgctcacttatgtcttcaacaatttctctca
aaacatggtcatataatattaatgcagataataaacactcatgtaacaataattaagaaa
atggatgtgcctgaaacagacacagaaggatgtgaagatgcaagtatacgttctgaggtg
gggattaatggatatgtagaacaaccatcaggtactggagctgaccgtgaaatgagagaa
ttacaagaggctataagattaattcgaaataatgctcatcaacctctacgaatatttgca
gtaaataatgctgttgaaaatgcaagtagtggtgccattccacccaatatggataaatta
gcagtagggtttagtactacagagattaggctgtggggtataaatgaaacagtattaatt
aagccaaagtatgaagaaccttccttcacatttgcctctgatattccatttttacataaa
ttttacgatacgtcagatgaaatgattgaaggaggggcagtgatacttagaggacatacc
gatattgtacatgatttaaggtttattccagaatcggatatattactttctgtatctagt
gataaagatatgagggcatggagacttaatgattacacatgtgccgcaatttatagtggt
cataattatcctatatggtgtatggatcttagtgtatttaatctatatgtagcaactggt
tctcatgacagaactgccaaattatggtctttagataggatatttccattacgtatattt
gccggtcactttttagatataaattgtgtcaaatttcacccaaacgctcgatatttagcg
actgggtctgctgataagactgtgagattatgggataaggacgacggaaatttattaagg
gtatatataggcgcgcagtcaacgatttatagtttagcctttagtccagatgggaaatat
ttggcagctgcaggcgatgacaaatctatttctatttgggatttatcaactaacgcattg
ttaactgaacttaaaggccacgaagacacgattatgaatttagactggagttgtgatggt
caatacattgccagtggaagtttggatggcactattcgtttatggcctacacatgatcat
gttaaaattgttaatagcaattcatcaagtctagtacctgaaacagaatcaccacaaata
ttctcaacttattgctcgagcatcctttctttacgttattacaataaaaataattcgctc
gtgtgcattggaacagtggacaatttgtaa

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