Bombus vancouverensis nearcticus: 117159057
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Entry
117159057 CDS
T07628
Name
(RefSeq) uncharacterized protein LOC117159057
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117159057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvan03041
]
117159057
Spliceosome [BR:
bvan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117159057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
An_peroxidase
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
117159057
NCBI-ProteinID:
XP_033194458
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MALTRKEIDEMKPQIEKAVHKFLGFGEPAIVTTAVNCMTSGYDKRKTADKLSALLEDKKA
LKLTEKIFTIYDDAKAAQKSKKRNHVEDKDKDKDAKKPRFKDDEVKNEKTTEAQLSADKI
KQMMANAQREIEERKRALKAIKQEEVAPVKPLLKARDSLPTVGSMYNQGLLSKTDSDKAR
KIAALQAQIRSKLSSGLLGNVSVPDKPTPLILDESGRTVDITGKEVQLTQVVPTLKANIR
AKKREEFKAQLQESKGPEEIQDTHFFDNRIGVKPAVRGKRTLKFHEPGKFQQLAERIRMK
AQLEKLQNEISQIARKTGISSATKLALIAPKTEALSEDVPNVEWWDSVILTGGYPNEDES
TTIKSSTITNLVEHPTQMRPPTDPLKPIYMPVFLTKKERKKLRRQNRREAWKEEQEKIRL
GLEPPPEPKLRISNLMRVLGTEAVQDPTKIEAHVRQQMAKRLKAHEDANAARRLTADQRR
EKKARKIKEDTTLGVHVAVYRIRDLLNNASKKFKVETNAKQLYLTGCVMLFRDCNVVVVE
GGAKQLSKYKRLMMNRIKWEEDIIKDNGNDVPNKCVLVWEGTSKQRHFGEIKFKVCPIEK
MAREHFKKHQVEHYWDLAYSGAVLENTDDISIRRFLATLVLIKGTTLPSNMLLDLGRRTN
ISMEKYDQAERAILNSRTHLNHGSPSWYLGVSHEMTEHAQNLSRKALRIETMAVMLVEAL
NMSSKEASSVLPSVTAISCPDSPTYLQVMASCKKIDPRYRTHSGKCNNGLHPTWGAALEA
YIRFLPTEYVDGVSLPRIDLPSARDVSLRVHSGGSDLKHPYLMALTALFGQFLIHDLAHT
PKMELPDGARLKCCDVDYEHFHPECFPIRANNVVGCMEYSRSAPHPGNSLQGCKLGPRQQ
INQASSYLDLSPVYGSSEDVAQALRSGKGGLLNTQRKNLPMPSPKYESCRSANKAFPCFL
SGDSRVNENPGLTLMHVLFLREHNRVATELGRLNPHWDDERLYQEARRIVIAEMEHITYN
EFLPVVLGETTLDKYQLRLTHRGYFRGYDTRTDATLSNAAASAGLFFIATLTPKTLDLVD
SRSALKSGERSLLSAFYAPQEFYEAGAIDRLIAGATAGHSRKPLPPGLNEILLERYFHDG
KSNDIPVDYAAQIIQQGRDHGLPSYVRWRSFCNLAHVSSFEHLRGAMSKDTIERLRNVYK
NVEDIDLVTGLLSEAPLPDSVLGPTFLCLLGRTFRNIRFGDRYWYENGNTPGSFTLYQLE
EIRKITMTQILCYNGERLNWVQPRAFLLRDRFLNEVINCTIHKSGSPNLSFWEERNNS
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaggaaagaaatagatgaaatgaaaccacaaatcgaaaaagcagtacat
aaatttctcggttttggagaacctgctattgttaccacggctgtcaattgtatgacttca
ggttatgataaacgcaaaacggcagataaattatctgctttattggaagacaagaaagct
ttaaaattgacggaaaaaatattcacaatatatgatgatgccaaagcagcgcagaaaagt
aaaaaacgaaatcatgtggaagataaggataaggacaaagatgcaaagaaacctagattt
aaggatgatgaagtcaaaaatgaaaaaacaacagaagcacaactatctgcagataagata
aaacaaatgatggcaaatgcccaaagagaaatcgaggaaaggaaaagagcattgaaagct
ataaaacaagaagaagttgccccggtaaaacctctacttaaagcacgagattctttacca
acagtaggaagcatgtataatcaaggtttattaagtaagacagactccgacaaagcaaga
aaaattgctgctttgcaagcacaaattagaagtaaactaagctccggattacttggaaat
gttagtgtcccagataaaccaactccgctaattttggatgaatctggcagaactgtagat
ataaccggcaaggaagtgcaactcacacaagtggtaccaacattaaaagctaatattcga
gcaaaaaaacgtgaagaatttaaagcccaattgcaagaatcaaaaggcccagaagaaatt
caagacacccacttttttgataataggataggtgtcaaaccggcagtgcgaggcaaacgg
acactcaaatttcacgaacctggaaaattccagcaattagcagaaagaattcgtatgaaa
gcccaattagaaaaattacaaaatgagattagtcaaattgccagaaagactggtataagt
tctgcaactaaattggcgctaatagcgccgaaaacagaagctcttagtgaagatgtgcct
aatgtagaatggtgggattctgttatattaacaggaggatatccgaacgaagatgaatct
actaccattaaaagttctactatcacaaatcttgtagaacatcccacgcaaatgcgacca
ccaactgaccctttgaaaccaatatatatgcctgtatttttaacgaaaaaggaacgcaag
aaattacgtaggcaaaatagacgagaagcatggaaagaagaacaagagaaaatacgatta
ggtcttgaacctccaccagaaccaaaattacgaatttcgaatcttatgcgagtattaggt
acagaagctgtacaagatcctacgaaaatagaagctcatgtccgacaacaaatggctaaa
agattaaaggcacatgaggatgctaatgcagctcgaagacttactgctgatcagcgacga
gaaaagaaggcaagaaaaattaaagaggataccacgcttggtgtacatgtagctgtttat
agaatacgtgatcttttaaataatgcttcgaaaaagtttaaagtggaaacaaacgcaaag
caactttatctaacaggctgtgtaatgctcttccgagattgcaatgttgttgttgttgaa
ggaggagccaaacaattaagtaaatacaaacgactaatgatgaaccggattaaatgggag
gaagatattataaaagataacggaaatgatgtgccgaacaaatgtgttcttgtatgggaa
ggtactagtaaacaacgtcattttggagaaatcaaattcaaagtttgcccgattgaaaaa
atggcgcgtgaacattttaagaaacatcaagtagaacattattgggacttagcatatagt
ggagcagtacttgaaaatacagacgatatttcgattcgcagattccttgccacgttggta
ctcatcaaaggtactacattaccttcaaatatgttactggatctgggtaggcgtacaaat
atttcgatggagaaatacgatcaggcggagcgagcaatcctgaactcgcggacacatttg
aatcacggttctccttcatggtacctcggtgtgtcacatgaaatgaccgaacacgctcag
aatctctcaaggaaagctctacggatagaaacgatggccgtaatgctggtagaagctttg
aacatgtcatcaaaagaagcatcttccgtattaccatcggtaactgcaatcagttgtcct
gactcgcctacatatttgcaagtgatggccagctgcaagaagatcgatcctcgctacaga
acgcacagcgggaaatgcaataacggtttgcatccgacttggggcgcagctctagaagct
tatatacggttcttgccaactgaatacgtcgatggtgtttctctaccgcgtatagattta
cctagcgccagggacgtctctttgagagttcattccggaggatccgatcttaaacatccg
tatctaatggcgctcaccgcgctctttggtcaattcctcattcacgatctcgcgcacacg
ccaaagatggaactacccgatggggcgagactaaaatgttgcgacgtggattacgaacac
tttcatccagaatgttttccaatccgagccaataatgttgtcggctgcatggaatattct
agatcggcgccgcacccaggaaattcgctacagggatgcaaattgggtcctcggcagcaa
atcaaccaagcgtcatcgtacttagacctttcccctgtttatgggagttccgaagatgta
gcgcaagctctgcgatccggcaagggtggtttgcttaatacacagaggaagaacttgccc
atgccttcgcctaagtatgaaagttgcagaagcgcgaacaaagctttcccatgttttctt
agcggggattcacgggtaaacgagaaccccggtcttactctaatgcatgtactttttcta
cgtgaacataaccgagtcgctacagagctaggacgactgaatcctcactgggatgacgag
agactctatcaggaagcaagaaggatcgttatcgcagaaatggagcatataacttacaac
gagtttctacccgttgttctcggagaaacaactctcgacaaatatcagttacgcttaacg
catcgaggatactttcgaggctacgatactcgaacggatgcgacactttcaaacgctgcc
gcctctgctggactcttcttcattgccacgctgaccccaaaaaccctcgacctagttgac
tcgcgatcggcgttaaagtctggagaaaggtccttactatcggccttctacgctccgcaa
gagttctatgaagctggtgctattgatcgcctgattgctggcgctacagcgggacattct
aggaagccattgccaccaggactgaatgaaatacttttggaacgatatttccatgatgga
aaaagcaacgacattcccgtggattacgctgcgcagatcatacaacagggaagggatcat
ggtttgccatcttatgtcagatggcgatcattttgtaatttagcacatgtcagtagtttt
gaacatcttagaggagcaatgtccaaagatactatagaaagacttcgaaatgtttataaa
aatgtagaggatatagatttagtaacaggattactttcggaagcaccattacctgactca
gtcttaggaccaacgtttctttgtttattgggccgtacttttcggaatattcgttttggt
gacagatattggtatgagaatggaaataccccaggatcgtttaccttatatcaattagaa
gagatccgaaaaatcacaatgacgcaaatattatgttacaatggtgaaagattgaattgg
gtgcaacctagagcgtttcttctaagagatcgttttttaaacgaagtgataaactgtacg
atacacaaaagcggatcgccgaatctttcattttgggaagaaaggaataattcataa
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