Bombus vancouverensis nearcticus: 117159152
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Entry
117159152 CDS
T07628
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117159152
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117159152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
ResIII
DEAD
HEAT_ECM29
MMS19_C
Motif
Other DBs
NCBI-GeneID:
117159152
NCBI-ProteinID:
XP_033194624
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
MGSIRLDRLFILLETGTNAVTKRAAAQQLGEAQRLHPHDLHHLLARVSILLKSSQWDTRV
CAAQAVQAILAQVPTWDPQPIKKETCTEDEETKKPNNKLNLENFDMEKILARSSYLTGSE
GNEYDLTATDGEQMLLPNQKEKIAAKLGLHPQLMGVDTSELFTNEDLTPEVLPPTSNIQT
NVSVSETLKQPSGLSRREMNRARRKARQSVSKQRSREPDDHRNNEDYHNSNAQSPINNEG
EPLNKRIKLEELISLEIGVNNNSQTESVNGVPDSTGCWPDSVINWPLESFAESLCQDLFS
QKWEVRHGAATALRELVKLHGKGAGKSKNQTAEKMAESHYQWLIDAALRLLCVLGLDRFG
DFVSDQVVAPVRETCAQALGSLLLLVPNQKDDENKNRGITGILSVMLKLLENDEWEARHG
ALLALKYLLAIRDDLLDDILPRVFPATMQGLSDPVDDVGAAAASALIPVASALPRLLKSS
ELEAIVIRLWELLREQDDLAAACNSFMKLLAAILSLPWARSYITPQPLSQVLPRLWPFLS
HSSSSVRKATLQTLQTLTEDDGAHNENKKERWGEGGGLVLQEALRHVFQRALIEHVIAIQ
DVAERVWENLVVQSDLELLLHAACPLVSTWLCLAMQPEHVPFNPNLLMITTPNKGAKNNQ
VSGTCDGQSDASNNGGNNTVGGNVKSISELKVYIGGIETVAPNIRKSNLIHARCRAARML
GLLSHYVVQPAPGVTYTPDILSPSLCYAKVLLAHLNSRSALQRTIVGLTMSHWATVNNMK
PPTIPDILRKRLLECLNEYVYYDEIATSFTRLLHDSRGYVATLKHYNLPVLIKVEPSGVM
TLDQIAILAGKPISKLCAMGNTTNYGGPSGSFSNSSNPIKLKPKLIESLEERRSAVQLGA
ADIAAQQLSYNVMSTAALAGAATMLHCLPPSPQPLNPLIKPLMEAIKREENEELQKLAAK
HLSYLVDLCVDRKPTPNAKISTNLCTFLCSDTEFTPRVNCSTNADLFDGILTLSNRQKHA
ERIAYNRGTNSGLSGSRGPGRPPTTEIPLEELLAYEEPEAKADRTRRRGATLALTAIATL
FGAQLPTRLPHLWELILPNVLREKDKITNRENIQEEVNQLIFGLQVLEVMAPSLHKALLP
PVLECLSFLCELLAHPYKAVRHMASRCIAVLGTLDTEKIIIQITNHVIPLLESTGGEKIY
SGTVTAPSEVDSVKQGAAEALACLVESLGVNIVPYAVLFMVPLLGRMSDQNQAVRLACSA
TFATLVQLLPLDPGAITDPPDLIEKKTQEWRFLEQLLNPRSIPDTVLPIPVSAELRSYQQ
QGLNWLNFLNRYRLHGVLCDDMGLGKTLQTLCILALDHHRNPCAPPSLVVCPPTLTGHWV
YEAEKFFKTKDLSVLQYVGTPPEREKLRPMVTYHKLIVASYEIIRKDIDYFETCQWNYCV
LDEGHIIKNGKTKSAKATKRLHANHRLILSGTPIQNDVLELWSLFDFLMPGFLGTEKQFA
AKYSRPILACREPKAGPKEQEAGALAMEALHRQVLPFLLRRNKEDVLKDLPPKITQDYYC
DLSSLQRTLYEDFHTRRSATLLSAASCTSTGNNGCSVFEALRYLRNVCNHPKLVLNQRHP
LYATVCNTLKQRKSTLSEIEYAAKLPALKQLLLDCGIGQPQRQQNRNSVTTDTSDNQPPQ
EQQLVSQHRALIFCQLKAMLDIVEKDLLCAHLPTVTYLRLDGSVQTTQRHSIVTRFNADP
SIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITR
STVEEKIMGLQKFKLLTANTVISTENASLETMATDQLLDLFSLDSGKEKKSEIQDDATSK
ISEVPGISRSILEILPELWEQQQYDDEYDMQSFLSTLK
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgggttctattaggctagacaggctattcatactattggaaacagggacaaatgcagta
actaaaagagctgcagcacaacaattaggagaagcacagagattacatcctcatgattta
catcatttattggcaagagtttctatccttttaaagtcttcacaatgggataccagagtt
tgtgctgcacaagctgtacaagctatacttgctcaagttcctacttgggatccacaaccc
attaagaaagaaacatgtacagaagatgaagaaacaaaaaaaccaaacaataaattaaac
ttggaaaactttgatatggaaaagattttagcacgtagttcatatcttactggatcagaa
ggcaatgaatatgatttaacagctactgatggggagcaaatgctacttcctaatcaaaag
gaaaaaattgctgctaaattgggccttcatccacaattaatgggagttgatacatcagaa
ttgtttaccaacgaagatcttacaccagaagtattaccacctacgtcaaatatacaaact
aatgtatctgtgagtgaaacgctaaaacaacctagtggtcttagtagacgcgaaatgaat
agagctagacgtaaggcacgacagtcggtttcaaaacaacgttcacgagaacctgatgac
catcgtaacaacgaagattatcacaattcaaatgctcaatctcccatcaataatgaaggg
gaaccactaaataaaagaataaaattagaggaactgatttcgttagagattggcgttaat
aataattcacagactgaatcagtcaatggagtaccagacagcactggctgctggccagat
tctgtaataaattggcctctagaatcatttgcagaaagtctctgtcaagatctatttagt
caaaaatgggaagtaaggcacggagcagcgactgctttacgtgaactcgtaaaacttcat
gggaaaggtgcaggtaaatcgaagaatcaaactgcagagaaaatggcagaaagtcattat
cagtggcttattgatgccgccctacgactactatgtgttttaggattagatagatttgga
gattttgtttctgatcaagtcgttgcgcccgtacgagaaacatgtgctcaagcactaggt
tctcttttattactagtgccaaatcaaaaagatgatgaaaataaaaataggggaattaca
ggaatactttcagtcatgctaaaactgttggagaatgatgaatgggaagcaagacatggt
gcgctacttgcactcaaatatttgcttgctatacgagatgatctgttagacgacatacta
ccgagagtatttccagctactatgcaaggtctttccgatccagtcgatgatgtaggtgct
gcagcagcaagtgcgcttataccagtagcatctgctctaccacgtttgttaaaatcatca
gaactagaagcaattgtaattcgtctttgggaacttttacgtgaacaagatgatctagca
gcagcatgtaatagttttatgaaattacttgctgctatactttcattaccttgggcgcgc
tcttatattactcctcagccattatcgcaggtcttaccacgattatggccatttcttagt
cattctagttccagtgtacgtaaagccaccttacaaacattacaaacattaactgaagat
gatggtgctcataatgagaataaaaaagaacgatggggcgaaggaggtggacttgtattg
caagaggccctccgtcatgtttttcaacgagcgttaatagagcacgtaattgccatacaa
gatgtagctgaacgtgtttgggaaaatctagtcgtacaaagcgatctcgaacttttattg
catgcagcgtgtcctcttgtcagcacatggctttgccttgcaatgcaaccggaacacgtg
ccatttaatccgaacttactcatgataaccactcctaataaaggagctaagaataatcaa
gtttctggtacttgcgacggacaatcagatgctagtaataacggaggaaataatactgtt
ggtggaaatgtaaaatccatatccgaattaaaagtttatattggtggaatcgaaactgta
gctccaaacataaggaaatcaaacttaattcatgctcgttgtagagctgcacgaatgttg
ggattgttatcgcattacgtagtacaaccagcaccaggtgttacttacacaccagatata
cttagtccttcactttgttatgctaaagtattactagcacatctgaattcgcgttcagca
ttacaacgcaccattgtaggtttgacgatgtctcattgggcgactgtaaataacatgaaa
ccacctacaataccagatattttaaggaagagactattggagtgtttgaacgagtacgta
tactacgatgagatcgccacatcttttactcgtctgttacacgacagtcgcggttacgtt
gccactctcaaacattataacctgcctgttcttatcaaggtagaaccatcgggagtgatg
acgctcgaccaaattgcaatccttgctgggaaaccaatttcaaaactttgtgccatgggt
aatacgacaaactatggaggacctagtggaagttttagcaacagctctaatccgattaaa
ttaaagccaaagttgattgaaagtttagaagaaaggcggagtgcagtgcaactaggtgct
gccgatatagcagcacagcaactttcatataatgttatgtcaacggcagcactcgctggt
gctgcaacaatgttacattgtcttcctccatccccacaacctcttaacccattgataaaa
ccattgatggaagctattaaacgtgaagaaaatgaagaactacaaaaactggctgcaaag
catttgtcgtatttagttgatctctgtgtagatagaaaacctactcctaatgcaaagata
tcgaccaatttatgtacattcctatgctcggatactgaatttacacctcgtgtaaattgt
agtacaaacgcagatctatttgacggaattcttactttaagcaatagacagaaacatgct
gaaagaatagcttataatcggggaaccaacagcggacttagtggaagcagagggcctggc
cggccaccaacaactgaaattcctttagaagaactacttgcttatgaagaacctgaagct
aaagctgatagaacacgtcgtcgcggagctactttagcacttaccgctatagctactcta
tttggtgcacaattacctacacgtttgccgcatctttgggaactaatattaccaaacgta
ttacgagaaaaagacaaaatcactaatcgtgaaaatattcaagaagaagtaaatcagtta
atttttggtttacaagttttagaagttatggctcccagtcttcataaagccttactacct
cctgtcctagaatgcctttcattcttatgtgaattattggctcatccttacaaagctgtc
agacacatggcatccagatgtatagctgtattaggtacattagatacagagaagataata
atacagattacaaaccatgtaataccacttctagaatcaactggtggagagaaaatatac
tcaggaactgtaacagcaccaagcgaagtagattcagtaaaacaaggcgcagccgaagcg
ttagcgtgtcttgtcgaaagtttaggtgttaatatcgttccatatgctgtgctttttatg
gttccattgcttgggcgtatgagtgatcaaaatcaggctgtaagattagcttgtagtgct
acgttcgcaacactcgtgcaacttttgccccttgatcctggtgcgattacggatccacca
gatttaatagaaaagaaaacacaagagtggcggttcttagaacaacttttgaatccacgc
agtatcccagataccgtattaccgattccagtatctgcagagttacgttcctatcaacaa
caaggcttaaattggttaaatttcttgaatcgttatcgacttcatggtgttttatgcgat
gacatgggccttggaaaaactttacaaactctttgtatactagctttagatcatcatcgt
aatccttgtgctccaccaagcttggtggtgtgtccaccaactctaactggtcattgggtg
tatgaggcagaaaagttcttcaaaaccaaagatctctcagtgttacaatatgttggcacc
ccacctgagcgtgaaaaattacgtccaatggttacttatcacaaactcatcgttgcaagt
tatgaaataatccgtaaggatatcgattatttcgaaacttgtcaatggaactactgtgtg
ctcgacgaaggtcacattattaaaaatggaaagacaaaaagtgctaaggcaactaaacga
ttgcatgcgaatcacagacttatactttcgggaacaccaatacaaaacgatgtacttgaa
ttatggtccttgtttgactttttaatgccaggtttcctgggtactgagaaacaatttgcg
gcaaagtactcacgtcctatactagcctgtagggaaccaaaagctggcccaaaagaacaa
gaggcgggagctttagcaatggaagcacttcatagacaagttttgccattcttacttaga
cgaaataaagaagatgtcctcaaagatttaccaccaaaaattacacaagactattattgc
gacttatcgtcattacaacgtacgctatacgaagatttccatactcgacgttctgccact
ttattatccgctgcgtcgtgcacttcaactggaaataatggttgtagtgtctttgaagca
ttacgatatcttcgtaatgtttgtaatcatcccaaattagtattaaatcaacgacatccg
ttatacgcaactgtgtgtaatacattgaagcaacgaaagagcacattatctgagatagaa
tatgcagccaagttacctgcattaaaacaattattattagattgtggcataggacagcca
caacgacaacaaaaccgcaattctgtaactactgatacatcagataatcaaccaccgcag
gagcaacagttagtgagccaacatcgagctttaattttttgtcaattgaaagcaatgcta
gatattgtggaaaaagatcttctttgtgcccatttacctactgttacatatcttcgtctc
gatggaagtgtacaaaccacgcaaaggcattccatagtaacacgttttaacgcagacccg
tcgatagacgtgcttctgttaacgactcaagtcggtggccttggattgaatctaactggt
gctgacactgttatattcgtggaacatgactggaatcctatgaaagatcttcaagcgatg
gatcgagcacatcgtattggtcaaaagaaagtagtgaacgtatacaggttaatcacaaga
tcgacggtagaggaaaagatcatgggactgcagaaattcaaacttctcacagcaaatacc
gtaatttcaacggaaaatgcatctctggaaacaatggcaactgatcagctacttgacttg
ttttcattggacagtggcaaagagaaaaaatcagaaatacaggatgatgccacttctaaa
attagtgaggttccaggcattagccgttccattttagaaattctccctgaactatgggaa
caacaacagtatgacgatgaatatgacatgcagtcatttctatctactttaaagtga
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integrated database retrieval system
