Bombus vancouverensis nearcticus: 117159224
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Entry
117159224 CDS
T07628
Name
(RefSeq) aladin-like isoform X1
KO
K14320
aladin
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117159224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117159224
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117159224
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
ANAPC4_WD40
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
Motif
Other DBs
NCBI-GeneID:
117159224
NCBI-ProteinID:
XP_033194754
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MIKIFSLREFDCPSADDLATVALIEDVLHYCDCDNLTNELRPFAKYLREYPEVSITSDIL
ATRETARTACAGDLFLPVHDSIFRRLASVCREKGLIDAVCLAASAEPQEITPILHLIATR
LKWMLDLVDKGIYQKETLPTSGSGSVADVVHTKDWETSLARCISWHPHCSRLAVVTWDDR
IRIFSHGAPIIPILRHGAQKSVCCIHWRPFTGKELAVACHTGVLVWTIELGAASNILSHA
VLLKQRNHAPVTSVRWHPQGDLLVSCSPADTRMIIWDTSKKEGVPLRRVGGDGLCFARWS
SCGSHLFSASCRNIFRIWNTGVATLWHADKWTVPNGRVAVACFGPNLSLLFASNEDPATI
FSLPLQENIFDVKKPSLDDVKLAVPLMDLTRVNFSLDDGDSYVTVGGRITAMEWDPTGRY
LAILFQDSPYIALIKTKLGNLSRVIDVKPSCLIKGFPGEVPNCMDFYQKCQKGSGNVICL
TIVWSSGRIQHFPIIEKKIAPVTNTSTSVSSHSLLRHDTYNFDLTAIY
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatattctctctgcgtgaatttgattgcccttctgccgatgacttggctact
gttgcacttatagaggacgttttacattactgtgattgtgataacctgaccaatgaatta
cgaccttttgccaaatatctgcgagaatatccagaagtttctattacttctgatattctt
gctacacgcgaaacggcacgcacagcttgtgccggtgatttgtttttaccagttcacgat
agcatctttagaaggctggctagcgtatgcagagagaaaggattaatcgatgctgtttgt
ctggctgcgtctgcagaaccgcaagaaattacaccaatcttgcatttgatagctacgagg
ctcaagtggatgttagatttagtagacaaaggaatatatcagaaagaaactttacctact
tctggatctggatcagttgcggacgttgttcacacaaaggactgggaaacatctttggcc
aggtgtatctcgtggcatccacactgctcgcgactagcagtagttacatgggacgatcgt
atacgtatattttctcatggagcaccgataataccgattttaagacacggcgctcaaaag
tctgtttgttgtatacattggagaccattcactggcaaagaactggcagtagcgtgtcac
acaggtgtcttagtttggacgatagaattaggggcagccagtaatattctcagtcacgcg
gtgttgctaaaacaaagaaatcatgctcctgtaacaagcgttagatggcatccgcagggt
gatctattggtgtcttgttctccagctgatacacgtatgattatctgggatacttctaaa
aaagaaggtgttccattgagacgagtcggaggtgacggcctatgtttcgctcgttggtcg
tcttgcggttctcatttgttttcagcctcgtgtagaaatatatttagaatttggaacaca
ggagtagcaacgttatggcacgcagataaatggacagtgcctaatggtcgtgtggctgtt
gcgtgtttcggtcctaatttgagtctgttgtttgcatcgaacgaagaccctgccacaatc
ttttctttacctctgcaagaaaatattttcgatgttaagaagccttctctcgacgacgtc
aaactggccgtgcctctgatggatttaacaagagttaacttttcgttggatgacggtgac
agttacgttactgtcggcggaagaataactgcaatggagtgggaccctacaggaagatat
cttgctatcctcttccaggacagcccatacatcgcattgattaaaaccaaactaggaaat
ctgtcacgtgtgattgacgttaaaccgagttgtcttataaagggatttccgggcgaagtt
cctaattgcatggacttttatcaaaagtgtcaaaaaggatcgggcaatgtaatttgttta
acaattgtatggagtagtggtcgtatccaacactttccaataattgagaagaaaattgct
cctgttacgaatacgagtacttcagtttcatcgcactcgttgttaaggcacgatacatac
aatttcgatttgactgccatttactga
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