Bombus vancouverensis nearcticus: 117159453
Help
Entry
117159453 CDS
T07628
Name
(RefSeq) laminin subunit gamma-1 isoform X1
KO
K05635
laminin, gamma 1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117159453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
117159453
NCBI-ProteinID:
XP_033195187
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MTRGRHKKMLMLIPILLVAVFAEPDPSDDLYRGFPKYRDEDKCYDDSGKPQRCIPPFENA
AFNVLMEATNTCGQDRPTEFCKQTGVQKKSCEICQYGDHQALYLTDHDNNDNATWWQSET
MFEGIEYPNQVNLTLHLGKTFDITYVRALFESPRPESWGIYKRKNEKSPWEPFQFYSATC
RDTYDLPDLKETVRGDDTRVLCTSDYSDISPLTKGTVAFSTLEGRPSAYNFETNPALQEW
VQATDLRITLDRLNTFGDEVFGDDHVLKSYYYAIADVAVGARCACNGHAGECVNSTSVDG
KTRRVCRCEHNTAGPDCNECLPFYNDAPWGRATTKDAHECKPCNCNGYSERCFFDKELYK
ASGHGGHCLDCRANRDGANCEHCRENFYQRPEDSYCVACNCNEIGSRSLQCNSEGKCQCK
PGVTGDKCDRCAANYYNFGSYGCTSCECNAAGSLANAPTCDPTNGVCICKENVEGKRCRV
CKPGFFNLAMDNEFGCTPCFCYGHSSVCRPATGYSKVVIESMFVRGTERWKATVAGNPIP
LHYDPLTQTIYATALDRDNAYFIAPDRFLGDQRASYNQDLLFTLRIGEAGPAPTVRDIIL
EGGNGEQITQPIFGQNNYLPSVTPHEYRFKLHEHPSYGWEPRLSSRAFMSILSNLTAIKI
RGTYTHQGRGFLDDVKLETALRGAAGETADWVEHCQCPHGYVGQFCESCAPGFHHDPPNG
GPFALCVPCNCNNHADICEAETGQCICEHNTAGSNCELCKRGYYGHPLKGTPDDCKPCPC
PDNGPCILLGNNPDPICSECPLGRTGPRCETCSDGYFGNPEKGIACRPCDCNNNIDLNAV
RNCNHETGECLKCVNNTAGFHCEECLSGYYGDALSDRKEDGCKLCQCFPPGTVELSDGRV
APCEQLTGHCTCKPHVTGRNCDKCEEGYYHILSGEGCTPCNCDAEGSYNRTCNAVTGQCE
CRPGITGQHCDACVSYQYGFSREGCKPCDCDNIGSQDLQCDASGQCPCFPNVEGRRCDRC
KENKHNRQNGCVDCPDCYNLVQAAVNSHRERLAELGNTLKKINSSPTVIKDSDFEKELKN
VQNKVKNLLQIAKQGSGNENKTLVEQLDELRDQLNEIEEIAQTVNLTAFDAHRTTLEGLM
NIDEAEKVLDKIHAQLTDTEDYLATDGATALSKAKSRADQVGQQNIQMTSIAQDARLFAE
LNVNEAKKIHALAEQARNTTMEAYSLAKKTIAKYSNMTDDIRGLENKLELLEHRMSEVKN
LTSIAATKSSAVSQEAIDLLILDLALPPVDIEQLRNQVEDVNNEGLRLKEQAQLLLDQNE
NLINEMVEKIRKSEELIESVQDQQAATAELVAELDKANEKVDDAVKRGDQTLKEAQETLQ
KLGEFHAEVEKERVKAQDALKDIKNIESLIMDAKEKASQAEKILDGSEYKAESAREIAQD
AQMHAEEASEKANTIRTEANKTKIEALRVGNEAEKLHQRVDITDSMMKEYEKRSGQDTNI
TTEANHKVSLAKINVTLASQQLDKALTEVAEIIKELENLPEIDNTDLNPLEERLAAAEKE
IVAASLDQRIRNLTDAKNLQTQWVKNYEDEVSRLRMEVENIDDIRKVLPAICNNRVRLEP
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgactagaggaagacataagaagatgttaatgttaattccaatcctcttggtggcagta
tttgcagaacctgacccctcagacgacttataccgtggatttccaaaatatcgagacgaa
gataaatgctacgatgacagtggaaaaccacagaggtgtataccaccttttgagaatgcg
gcatttaacgtacttatggaagcaacgaacacgtgtggtcaagatcggccaacagaattt
tgtaaacagactggggtccaaaagaaatcttgcgagatatgtcagtacggagatcatcag
gctttataccttaccgatcacgacaataacgacaatgcaacttggtggcagtcagaaaca
atgttcgagggtatcgaatatccaaatcaagttaatctcacactacatttaggcaaaacg
ttcgatataacttacgttagagcacttttcgagtcgccgcgtccagaaagttggggtatt
tataagaggaagaacgaaaagtcgccatgggaacctttccaattctattctgcgacctgc
agagatacatatgacttaccagatttaaaggaaactgtacggggagatgataccagagta
ttgtgtacttccgactattccgatatatcgcctttgaccaagggtactgttgcattttcc
actctagaaggtcgaccttcggcatataatttcgaaactaatccagcattgcaggaatgg
gtacaagcaacggatttgaggatcactctggatagattaaacacttttggagacgaagtt
tttggcgatgatcatgtattaaagtcctactactatgcgatcgctgacgtcgccgttgga
gcacgttgcgcttgcaacggccacgctggagaatgcgtaaacagtaccagcgtggatgga
aaaactcgcagagtatgtagatgcgagcataatactgctggcccagattgcaatgagtgt
ttgcccttttataatgatgcaccgtggggacgtgccactactaaagatgcgcacgaatgt
aaaccttgtaactgcaatggttattcagagagatgcttcttcgataaggaactatacaag
gcttctggtcacggtggtcactgcctggattgtcgagctaatcgtgatggcgcgaattgc
gaacattgtagggagaatttctatcagcgtccggaagacagttattgcgttgcttgtaac
tgcaacgaaattggttcgagaagtttacaatgtaacagcgaaggaaaatgtcagtgtaaa
cctggtgtaacaggtgacaaatgtgatcgttgcgcagcaaattattacaactttggatca
tacggttgcacctcttgcgaatgtaacgcagccggttcccttgcgaatgcaccaacttgt
gatcccactaatggtgtttgtatctgcaaagaaaatgttgaagggaagcgatgtcgagta
tgtaaaccgggatttttcaatcttgcaatggataatgaattcggttgtacaccatgcttc
tgttacggacattcctcagtgtgcagaccagcgactgggtattctaaagttgtaattgag
agtatgtttgtgagaggaactgaacgatggaaagctaccgtggctggtaacccgatacca
cttcattatgatcctcttactcaaacgatatatgccacggcattggaccgagacaatgca
tattttattgctcctgatagattcctcggggatcaacgtgcatcttataaccaagactta
ttatttacactaagaattggggaagctggtccagcacccactgtccgcgatataatcctc
gagggaggaaatggagaacaaattacacaaccaatttttggacaaaataattatttacct
tcagtaacaccacatgaatatcgtttcaaattgcacgaacatcctagttatggttgggaa
cctcgcctttcctctcgagctttcatgtctattttatcgaacttaacagctattaaaatt
cgtggcacctatacgcatcaaggtcgaggattcttagatgatgttaaattggagacggcc
ctccgtggagctgcaggcgaaaccgctgattgggtggagcattgtcaatgtccgcatggt
tacgtaggccaattttgtgaatcctgtgcacctggattccatcatgatccgcctaatggt
ggtcctttcgcactttgtgtcccttgcaattgcaataatcatgcagatatttgtgaagct
gaaactggacagtgtatctgtgaacataatacggctggtagcaattgtgaattatgtaaa
cgtggatattacggtcacccattaaagggtacacctgatgactgtaaaccatgtccttgt
cctgacaatgggccttgtatattacttggcaataatcctgatccaatttgttctgaatgt
ccactgggtagaacaggacctagatgtgaaacatgttcggatggatacttcggaaatcct
gaaaagggtatagcttgcaggccttgcgattgtaacaacaatatcgacttgaacgctgta
agaaattgcaatcacgaaactggtgaatgtttgaaatgtgtaaataatacagctggtttc
cattgtgaagaatgtctttcaggatattacggagacgcattgtctgatcgtaaagaagat
ggatgtaagctatgccaatgtttcccgccaggcacagtcgaactcagcgatggtagagta
gcaccttgtgaacaattaacaggtcattgtacttgcaagcctcatgtaaccggccgaaat
tgtgataaatgtgaagaaggatattatcatattctaagtggagagggatgtacgccttgc
aattgcgatgctgaaggatcttacaatcgtacctgcaatgccgttactggtcaatgtgaa
tgtagacctggtattactggacaacattgtgatgcatgtgtttcttatcaatatggattc
agtagagaaggatgcaagccttgtgattgtgataatatcggttctcaagacctgcaatgt
gacgctagtggacagtgtccatgcttccccaatgtagaaggaagacgctgtgatcgttgt
aaagagaacaaacataacagacaaaatggatgcgtcgattgtcctgattgttacaatctt
gttcaagctgcggtgaatagccatagagaacgcttagctgaattaggaaatacactcaaa
aagattaacagcagtccgacagttataaaagattcggactttgaaaaagaattgaaaaat
gttcagaataaagtaaagaatcttctacaaattgccaaacaaggatctggtaatgaaaat
aaaacgttggtggaacaacttgatgaattacgtgatcagctgaatgaaattgaagaaatc
gcacaaactgtgaacctgactgcttttgatgcacatagaactactttggaaggtttaatg
aacattgatgaagcagaaaaagtgcttgataaaatacatgctcaattaaccgatacagaa
gattatttagccacagatggagcaactgcattatcaaaagcgaaatcacgtgcggatcaa
gttggtcaacagaatatacaaatgacttcaatcgcgcaagacgcgcgtctctttgccgaa
ttaaatgttaatgaagcgaaaaagattcatgcactggcagaacaggcacgaaatacaaca
atggaagcttatagtctcgcaaaaaaaactatagcaaaatattctaacatgactgatgat
attagaggattagaaaataaattagagttactagagcatcgtatgagcgaggtgaaaaat
cttaccagcatagcagccactaaatcatccgcagtttcgcaagaagcaatagatttactg
attctcgacttagcacttccacctgttgacatcgagcaattgagaaatcaagttgaagac
gtaaataatgagggactacgattgaaagaacaagcacaattgttgttagatcaaaacgaa
aatcttataaatgaaatggtagagaaaataagaaagagtgaggagttaatagagtcagta
caagatcagcaagcggctactgccgaacttgtagccgaattagataaagcaaatgaaaaa
gtagatgatgctgtcaaacgaggagatcagactttaaaagaagctcaggaaacattacag
aaattgggtgaatttcatgctgaagtagaaaaagagcgtgttaaagcccaagatgcttta
aaagatataaaaaatattgaatcattaatcatggatgccaaggagaaagcttcacaagct
gaaaaaatattagatggttctgaatataaagccgaaagtgcacgtgagatagcacaagat
gctcagatgcatgcagaggaagctagtgaaaaagcgaacactattagaacagaagcaaat
aaaactaaaatagaagcacttcgtgtaggaaacgaagctgaaaaattacatcaaagagtt
gatattacagattccatgatgaaggaatacgagaaacgaagtgggcaagatacaaatatt
acaaccgaagcaaatcataaagttagtctagctaagattaatgtaacgttagcatcgcaa
caactcgataaagctctaaccgaagtagctgaaataataaaagaacttgaaaatttaccg
gaaattgataatactgatttaaatccgttagaagaacgtttagctgcagctgaaaaggaa
attgtagctgcaagtctagatcaaagaattcgtaatttaacggatgcaaaaaatttgcaa
acacagtgggtaaagaattatgaagatgaggtcagtagactaagaatggaagttgagaac
attgatgatataagaaaagttttgcctgccatctgtaacaatcgtgtacgactcgaaccc
taa
DBGET
integrated database retrieval system
