Bombus vancouverensis nearcticus: 117159586
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Entry
117159586 CDS
T07628
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
bvan03015
mRNA surveillance pathway
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117159586
09122 Translation
03013 Nucleocytoplasmic transport
117159586
03015 mRNA surveillance pathway
117159586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117159586
03041 Spliceosome [BR:
bvan03041
]
117159586
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117159586
Spliceosome [BR:
bvan03041
]
Complex C
Other components
EJC/TREX
117159586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
117159586
NCBI-ProteinID:
XP_033195445
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MRRKSERNKAKAGSPEKEVERVTRKSTRKCVKQASSTSLEQENVEETTKSLSNKITEKKS
AHIQKKEVEQLEEQNEKVLSVEADVKTKSQEDEEDNNSGSIWKVSKSDASPGEIQRLKLS
RQYNTTEGLSDTSLNRKKSNKWQESGEGVAEEVDSADKQLVSSTRVPSSTEQPNDPSSSY
PGQDSNEEVSDSKEILPETTSANLSDDKPNIDQQGESNEANYSNENADSKSIKSTSTTIL
APSSNGNHSSEETNIIPKEEKSVEDTSEKTVEAFNKETSVENTQRDSSSDEEEDKKEKVR
ELNSSSESNDEIHTKSNRTGGRIQSASRRKHRTKYRDSSNSDTPDSEDEPSIKREIDVCM
QEEKISTEDSHEQKDHTESPKARNNFLLNNMEMEIEHCEANKQKLDNLVDKSEYTASVTT
QLVTYKPVKVNLKRSFSSRMLTEKNDVKKEDTDANANSEASAPNKENHDNTEPDSKCVPR
KRRWGTALSTDTAPSFSISTDSLKALVPGARPLSINEVRLSKDDDEDRDRYRVSEKWHNS
NEGINDNKSGDENIMQKNGATKKGDPKIDNHIAARRKISIVKEVPHVKSPSPPATKPTNI
LLIKNLVRPFTLNQIKELLSRTGTIVENGFWMDRIKSKCFVEYANEDQAFETRQALHGIS
WPVSNPKRLHVEYATKDDMELARELSKDQSIPRKTEPLVPSDSWQQDWNREERTNTKVMV
VREWDLGKEDGQQHIKEKEREKKEHDKKRRQRSRSPAVEAHLPAPARKFKKKEDEPPPAK
LLDDLFRKTKATPCIYWLPLTNEQIVVKEEMRRQHMAEHARRLEEMRRAERNNRDGRRRR
SPRK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcaaaagtgaaagaaacaaagcaaaagcagggtctccagagaaagaggttgaa
cgagtaacacgaaaatcaactcgaaaatgtgtgaaacaagcatcttcaacatccttagag
caagagaatgttgaggaaacaacaaaaagtttgagcaataaaatcacggaaaagaagtca
gcacatatacagaaaaaggaagtggaacaattagaagaacaaaatgaaaaagttttgtct
gttgaagcagatgttaagaccaaatcgcaagaagatgaagaagacaacaattctggatca
atctggaaagtgtcaaaatccgatgcatcacctggcgagatacagagattaaaattatct
agacagtataacacaacagaagggttatctgatacttctttaaataggaaaaaatcgaac
aagtggcaggaaagtggtgagggagttgcagaggaggttgactcggcagacaagcaactg
gtttcttctacaagagtacccagtagcactgaacagccgaacgatccctcctcttcatac
ccaggtcaggactccaacgaagaggtaagtgatagcaaggagatcctgcctgaaaccact
tcagccaacttgtctgacgataaaccaaacatagatcagcaaggtgaatcaaatgaggca
aattactccaacgaaaacgctgatagtaaatccattaagtcgactagtacaactatattg
gctcctagttcaaatggtaatcattcatccgaggagacaaacattatacccaaggaagaa
aaatctgtggaagatactagtgaaaagacagtggaagcatttaataaagaaactagtgtt
gaaaatactcaaagagattcaagcagtgacgaggaagaagataaaaaggaaaaagttcgt
gagctaaattcatcatccgaatcaaatgatgaaattcatactaaaagtaatagaactggt
ggcaggatacaaagtgccagtcgcagaaaacatcgaactaaatatcgagattcatctaat
tctgatacaccagattctgaggatgaaccttctattaaaagagaaattgatgtatgtatg
caagaagagaaaataagtacagaggattcccacgaacagaaagatcatactgagtcacca
aaagcaaggaataattttttattaaataacatggaaatggaaatagaacattgtgaagca
aataaacaaaagttagacaatctagttgataaatcagaatatactgcatcagtaacaact
cagttggtgacttacaaacccgtgaaagtaaatttaaaaagatcattttcttcgagaatg
ttaacagaaaagaatgatgttaaaaaagaagatactgatgcaaatgcaaatagtgaagca
agtgctccaaataaggaaaatcacgacaacaccgaaccagattccaaatgtgttccaaga
aagcgtcgatggggtactgcattatctactgacaccgcaccttcgttttcaatttctacg
gattcacttaaagcgttggtgccaggagcaagaccattgtcgataaatgaggttcgtctt
tcaaaagatgacgatgaagacagagatcgttatcgagttagcgaaaagtggcacaattct
aatgaaggaataaacgataataagtccggtgacgaaaacatcatgcaaaagaatggtgca
acaaaaaagggagacccaaagatagataatcatatagcagcaaggcgtaagatatcgatc
gttaaagaagtgccacatgtcaaatctccaagtccacctgctacgaagcccacaaatatc
cttctgatcaaaaacttggttcgtccgtttactttgaatcaaattaaagaacttctgtcg
cgtactggcacaattgtcgaaaatggattttggatggatcgaattaaatccaagtgtttt
gtagagtatgctaacgaagaccaggcatttgagacgaggcaagcgttacatggtatatcc
tggccagtttcaaacccaaagaggcttcatgttgaatatgcaaccaaagatgacatggaa
ttagcacgcgaattgtcaaaggatcagtccatcccaagaaaaactgaacctctcgtaccg
tctgattcatggcagcaggattggaatcgcgaagaaagaacgaatacaaaggtgatggta
gttcgagaatgggatcttggtaaagaagatggacaacagcatataaaagaaaaagaacgt
gaaaagaaagaacatgataaaaaaagacgacagaggagtcggagtccagcagtggaagca
caccttccagctccagctcgtaaatttaaaaagaaagaggatgagccaccaccggctaag
cttctagatgatctctttagaaaaacgaaagcaacgccatgcatatactggttaccactc
acaaatgaacagatagtcgtaaaagaagaaatgagaaggcaacacatggcagaacatgca
cgcagattagaagagatgagacgcgctgaaagaaacaacagggacggtcgtcgccgtcgc
agcccaagaaaatag
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