Bombus vancouverensis nearcticus: 117159759
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Entry
117159759 CDS
T07628
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like
KO
K11274
chromosome transmission fidelity protein 4
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bvan03036
]
117159759
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
117159759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Sugar_tr
MFS_1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
Ctf4_C
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_Vps41
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
HMG_WDHD1
Beta-prop_WDR75_1st
HMG_box
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
117159759
NCBI-ProteinID:
XP_033195789
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MPLIKKPMRYAHPEGHTDVCYFTGEKGGLVTCGSDGDVRSWLNLMDDDPSACCVSEQAIS
VVSKNGKIFVGNDNNTIQVLSYPDLEKEGIVTRFSAPVSALATTKNSNIIVSGGCDMRIQ
VTDINTSDNIELIGHEAPILGLSLDPKEEFVASSSADGTIRVWNIKEKRVANIWANVVPK
CNSFFTAKMYNVPSFHPKDGSYLAYPCAKDVVIVERSSWKELFRLKCINMKTEINICKFS
ECGTLLAASSVQGEIVVWDVKSKELIGYIGHQQNAKITALSWNIDKSDEIAFCDSLGQLG
CIDVIIPNRTTSNELPLETNGDVEDSNVDIPEDDDDDDDGENVISLNKIKASIELEDDQK
SHSDVVSEKSQHGANVFIPEIHLQPPFQPGSSPVHLLSRFMVWNDTGMVRCFTSEDGDES
SIEVEFHDAAVHRSMHINNYLRHTIAALSPEAFALNCPSSSDTRSKLVVIALQGWGSGNK
EWSLDLPEDEEGHCIAAGDNFVALATSRRHLRIFTVGGTQREIVALPGPVVAMNGLKNNL
VLAYHTGTGASGDQCMNLLSIQIRGVNLISRTLCLPLSSSSELMWLGITDFGSPVTMDAD
DVIRVYNKKSSLWKVASDMSEQSKGKADHYFIIGINEQQSIARCILCKGSHYPPTTPRPV
ITEISLRLPLCEPETEKTEKELKLWKLGTSPPEENEAVLSLIALACRSNLEYRAVELCEQ
IASEKVIELAIKYARRINRIALSNKLESIADIKVEEKKEDIENNDNNDENVNKSDDEESN
NDIEEPTPSLTITKKPDIEIKPLSMTESLSIRRSNPFLKSGNSPATKGLAGLEITPEKPQ
KLTALTPIPLKSKTKEAKDGPKKETFISWYARNKKSLQEEFPELSAADLTKTALARYKEE
STGSQNSNTSETSESKKRKLKHAPLDVIQNAMGVMGPWHIVIAVALSLVKFPVAWHQLSI
VFLAPPTNFTCAAPISATNVSTIMKCYIDVGNGTMEKCTSFKYDRRTFKESIITQWDLVC
DREQLANFVQSCIMFGVLIGNLVFSIMADRIGRKKPLMIAIGLQSLTGFISAFVPWFELF
VIFKFISAVATGGTMLVSFVLLMEIVGIEWRSIMSVLFHVPFLLGHLMNPLISYLTHTWD
GFQMAVSIPSLFLLSYYWIIPESPRWLLAVGKLSKAEQILVKAAGRNKIPIENVKIAIET
YESNIGLRHKQSKEKYNITHLFRTPNLRLKTICVCFNWFVCGTCFFGLAQYMGYIDGNIF
VNVAVSAAVELPGTIVVLFLISRVSRLRILISGNLLSAASLLLLAVISNSNFTVLLATLG
LAGMSLSFPTIYLYSSEVFPTVIRNVGVGLGSVCARVGSMIAPYIATMGKVAPWLPPLIF
GTGPLLGALLCFLLPETMNCELPETIEDGENFGNLLQISIVITENRLKKLRQNNIYLKLT
IRGKPTIK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgccattaataaaaaaacctatgcgttatgcacatccagagggacacacagatgtttgt
tattttactggtgaaaagggagggcttgttacttgtggatctgatggagatgttcgatcc
tggttaaatctaatggatgatgatccaagtgcatgttgtgtctcagaacaggctatatca
gttgtatcaaagaatggaaaaatatttgttggcaatgataataatacaattcaagttctt
agttatccagatcttgaaaaagaaggaatagttactagattttcagcacctgtttcagca
ttagcaacaacaaaaaatagtaatattatagtctcaggagggtgtgatatgagaatacaa
gttacggatattaatacatcagataacatagaactaataggtcatgaagctcctatacta
ggtttgtctttggatccaaaagaagagtttgtggcatcatcaagtgcagatggtacaata
cgagtatggaatattaaagaaaaacgtgttgcaaatatttgggccaatgttgtgcccaaa
tgtaattcattttttacagctaaaatgtataatgtgccttcatttcatcctaaggatgga
agttatcttgcatatccttgtgcaaaagatgtagttatagttgaaagatcttcttggaag
gaattgttccgtttaaaatgtattaatatgaaaactgaaattaatatatgtaagttttcc
gaatgtggcacattattagctgctagttcagtacaaggagaaatagttgtttgggatgta
aaaagtaaagaattaattggctatattgggcatcaacagaatgctaaaattactgcatta
tcttggaatattgataaatcagatgaaattgcattctgtgactctttaggccaattggga
tgtattgatgttataattcccaatagaacaacaagtaatgaattacctttagaaacaaat
ggagatgtcgaagatagtaatgttgatattccagaagatgatgatgacgatgatgacggt
gaaaatgttatatctttaaacaaaattaaggcatcaatagaacttgaagatgaccaaaaa
agtcattccgatgtagtgtctgaaaaatcacaacatggtgcaaatgtttttatacctgaa
attcatttacaaccaccatttcaacctggttcatcaccagtacatttgttatctcgattt
atggtgtggaatgatacgggtatggtaagatgctttacatctgaagatggagacgaatct
agtattgaagtagaatttcacgatgcggcagtacatcgtagtatgcatatcaataattac
ttaagacacacaatagctgctttatcaccagaagcatttgcattaaattgtccatcaagt
agtgatacacgaagcaaacttgttgtaatagcattacaaggttggggttctggaaataaa
gaatggtcattagatcttcctgaagatgaagaaggacattgtattgcagctggtgataat
tttgtagcacttgcaacgtccaggagacatttaagaatttttactgtaggaggcacccag
cgtgaaattgtagctctgccgggtcctgtagtagcaatgaatggactgaaaaataattta
gtacttgcttatcatactggaacaggggcgtcaggagatcagtgtatgaatttactgtca
attcaaattcggggagtaaatttaattagtcgaacactatgtctccctttgtcatcatca
tcagaattaatgtggttaggaattaccgattttggatcccccgtaacaatggatgctgat
gatgttataagagtatataataaaaagtcttctttatggaaagtggccagtgatatgagt
gaacaatctaagggtaaagcagatcattattttataattgggataaacgaacaacaaagt
atcgctcgttgcattttatgcaagggaagtcattatccgccaactacacctcgcccagta
ataacagaaatatcgttacgtctgccgctttgtgaacctgaaactgagaaaacggaaaaa
gaactaaaattatggaagttaggaaccagtcctccagaagagaacgaagcagtgctgtct
cttattgcgcttgcttgccgaagtaatttggagtatcgagcggtagaattatgcgaacaa
atcgcttcagaaaaagttatagaattggcaattaaatatgcacgaagaataaatcgaata
gctttatccaataaattggagtcgattgctgatataaaggtagaagaaaagaaggaggac
atagaaaataatgacaacaatgatgaaaatgtcaataaaagtgacgatgaagaatcgaat
aatgatattgaagagcccacaccttcattaactattacgaaaaagccagatatagaaatt
aaaccgttatctatgactgaatcattatcaataagaagaagtaatccttttttaaaaagt
ggaaattctccggcgacgaaaggattagctgggttagaaataactccagaaaaaccacag
aagttaacagcactaacacctatacctttaaagtcgaaaacaaaagaggcaaaagatgga
ccaaagaaagaaacgtttatcagttggtatgctagaaataaaaaaagtttgcaggaggaa
tttcccgagttgagtgctgcagatttaacaaaaactgccttggcaagatacaaagaagag
agtacaggttcacaaaacagtaatacttcggagacctcggaatcgaaaaaaagaaaatta
aaacatgcaccattagatgttatacaaaatgctatgggtgtgatgggcccatggcacatt
gttattgctgtggcattgtctcttgtaaaatttccggttgcttggcatcaactttccatt
gtatttcttgcacctccaactaattttacatgtgctgctccaatctcagccactaatgta
tctacaataatgaaatgttatatagatgtagggaatggtacaatggagaagtgtacaagt
tttaaatatgataggcgcacatttaaagagagtataataactcaatgggacctggtctgt
gatagagaacaattagcaaattttgtacaatcttgcataatgtttggagttcttattggt
aacttagtattcagtataatggccgatcgaattggtagaaaaaagcctttgatgattgcc
ataggattacaatcgttaactggatttataagtgcatttgttccatggtttgaattattt
gtgatatttaaatttatttctgctgtagctacaggtggtactatgcttgttagttttgtt
ttacttatggagattgtaggaatagaatggcgttcaattatgtcagtccttttccatgtg
ccattcttactgggtcacctaatgaatcctttaatttcatatttaacacatacgtgggat
ggttttcaaatggcagtttccataccatcccttttcttattatcatattattggattata
cctgaatcaccaaggtggttacttgctgttggcaagctatcgaaagcagaacaaattcta
gtcaaagcagctggcagaaataaaataccaatagaaaatgttaaaatagcaattgaaaca
tatgaaagcaatattggacttcgtcataagcaaagcaaagaaaaatataatataacacac
ttgtttagaactcccaatttaagattaaaaactatttgtgtatgttttaattggtttgtg
tgtggtacttgcttttttggattagcacagtatatgggttatattgatggtaacattttt
gtaaatgttgctgtatcagctgctgttgaactgcctggaactatagtagttttattttta
atatcacgtgtatcacgtttaagaattctaataagtggaaatcttctatctgctgcaagt
ttgctattactagctgtgatatcaaattcaaatttcacagtacttttggctacattaggt
cttgcaggaatgtcacttagttttccaacaatatatctgtatagcagtgaggtatttcca
actgtaattagaaatgttggtgttggtttaggaagtgtttgtgcaagggttgggagtatg
attgctccatatattgcaacaatgggaaaagttgcaccatggttaccaccattaatattt
ggaactggaccattacttggtgctttattatgttttctactaccagaaacaatgaactgt
gaattaccagaaactattgaagatggtgaaaattttgggaacttattacaaatttcgatc
gttattacagaaaacagactaaaaaagctgcgacaaaataatatttatttaaaattaaca
ataagagggaagcccacaataaaataa
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