KEGG   Bombus vancouverensis nearcticus: 117159770
Entry
117159770         CDS       T07628                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03013  Nucleocytoplasmic transport
bvan03015  mRNA surveillance pathway
bvan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117159770
  09122 Translation
   03013 Nucleocytoplasmic transport
    117159770
   03015 mRNA surveillance pathway
    117159770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bvan03019]
    117159770
   03041 Spliceosome [BR:bvan03041]
    117159770
Messenger RNA biogenesis [BR:bvan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117159770
    TREX complex
     117159770
Spliceosome [BR:bvan03041]
 Complex C
  Other components
   EJC/TREX
    117159770
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117159770
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 117159770
NCBI-ProteinID: XP_033195805
LinkDB
Position
Unknown
AA seq 249 aa
MKMVDKIDMSLDDIIKQNKGTRPRGGSSRRGRGAGNSPRRGARRTQRVGGGVMRGRNRGG
ITRNSLPYTRGDVNSAWKHDMFDGVKKVGRSSIGSAGTTKLLVSNLDFGVSDSDIQELFS
EFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVATSEIPV
TSIRGGPRLSGSNFTQRPQSRFRGSRGAGSVRGRGTGRRGGRGGSRQVTKTPTAEELDAE
LEAYVKEVK
NT seq 750 nt   +upstreamnt  +downstreamnt
atgaagatggttgataaaatagacatgagtctcgacgatattatcaagcaaaataaagga
acaagaccacgcggcggcagtagcagacgtggaagaggtgccggtaattcaccacgtaga
ggagcacggagaacccaaagagttggtggtggcgtcatgcggggacgcaatcgtggtggc
attacaagaaattctcttccatacacaaggggtgatgtaaacagtgcttggaaacacgac
atgtttgatggagtaaaaaaggttggccgaagttcaataggtagcgcagggacaaccaag
ctccttgtatcaaatctagactttggagtatccgattcagacattcaggaattatttagt
gaatttggccccttaaagtcagcagcagtacattacgatagatcgggtcgatcattaggg
tctgcagatgttatatttgaaagaagagcagatgctattaaagcaatgaaacaatataat
ggcgtacccttagatggtcgtgaaatgaacatacaagttgctacctctgaaataccagtc
acatctatccgaggaggaccgagacttagcggcagtaattttacacagagacctcagtcc
cgctttaggggtagccgtggagcaggatccgtcagaggtcgtggaactggtcgacgtggt
ggcagaggcggcagtcggcaagtaacgaaaactcctacggctgaagaattagatgcagaa
ctggaagcttatgtgaaagaagtaaagtaa

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