Bombus vancouverensis nearcticus: 117159770
Help
Entry
117159770 CDS
T07628
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
bvan03015
mRNA surveillance pathway
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117159770
09122 Translation
03013 Nucleocytoplasmic transport
117159770
03015 mRNA surveillance pathway
117159770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117159770
03041 Spliceosome [BR:
bvan03041
]
117159770
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117159770
TREX complex
117159770
Spliceosome [BR:
bvan03041
]
Complex C
Other components
EJC/TREX
117159770
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117159770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117159770
NCBI-ProteinID:
XP_033195805
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MKMVDKIDMSLDDIIKQNKGTRPRGGSSRRGRGAGNSPRRGARRTQRVGGGVMRGRNRGG
ITRNSLPYTRGDVNSAWKHDMFDGVKKVGRSSIGSAGTTKLLVSNLDFGVSDSDIQELFS
EFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVATSEIPV
TSIRGGPRLSGSNFTQRPQSRFRGSRGAGSVRGRGTGRRGGRGGSRQVTKTPTAEELDAE
LEAYVKEVK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggttgataaaatagacatgagtctcgacgatattatcaagcaaaataaagga
acaagaccacgcggcggcagtagcagacgtggaagaggtgccggtaattcaccacgtaga
ggagcacggagaacccaaagagttggtggtggcgtcatgcggggacgcaatcgtggtggc
attacaagaaattctcttccatacacaaggggtgatgtaaacagtgcttggaaacacgac
atgtttgatggagtaaaaaaggttggccgaagttcaataggtagcgcagggacaaccaag
ctccttgtatcaaatctagactttggagtatccgattcagacattcaggaattatttagt
gaatttggccccttaaagtcagcagcagtacattacgatagatcgggtcgatcattaggg
tctgcagatgttatatttgaaagaagagcagatgctattaaagcaatgaaacaatataat
ggcgtacccttagatggtcgtgaaatgaacatacaagttgctacctctgaaataccagtc
acatctatccgaggaggaccgagacttagcggcagtaattttacacagagacctcagtcc
cgctttaggggtagccgtggagcaggatccgtcagaggtcgtggaactggtcgacgtggt
ggcagaggcggcagtcggcaagtaacgaaaactcctacggctgaagaattagatgcagaa
ctggaagcttatgtgaaagaagtaaagtaa
DBGET
integrated database retrieval system