Bombus vancouverensis nearcticus: 117159802
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Entry
117159802 CDS
T07628
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117159802
03036 Chromosome and associated proteins [BR:
bvan03036
]
117159802
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
117159802
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
117159802
SLIK complex
117159802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
117159802
NCBI-ProteinID:
XP_033195844
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MMQKTLESESGKESGSDSENESKSDSSSSGSNTGSGSGSESDSSSSSGSGSGSGSDSDKS
EKSDAPAQSDSFQSKSSNHSTETKVRLKNESSREWDENPDIYGIRRSSRSRKEPERLATQ
RESDSDSRKKFKKKGSHNSWNSDSSDSESDNVESRRPPPSKSLNRRAAQKAKEKGRIRKK
RISESSENSSFDSDDNRRQVTRRSGTAISYKEESEERTDSEDLVEIEEGNTANPEPDNTE
TIERILGQRVGKKGVTGNVTTIYAIEENGNPNPEDLSNEETELQYSIKWKGWSHIHNTWE
SEESLKAQKVKGLKKLDNFIKREREIKQWRDYAGPEDIDYFECQLELQQDLLKSYNNVER
IIAEYNKPDSDHPDYYCKWESLPYAEATWEDGALIVKKWPEKIKEFREREESKRTPSKHC
KVLKSRPKFHQLKGQPDYMGKGRDLTLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTI
QTICFLYYLFHTHQLYGPFLLVVPLSTMTSWQREMSQWAPDMNFVTYLGDVTSRNVIREY
EWCYSSKRLKFNAILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAEFHT
NHRLLITGTPLQNSLKELWALLHFIMPTKFSSWEEFEKEHDNAAQKGYSKLHKQLEPFIL
RRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIEL
KKCCNHAFLTKPTESERKDNNEDYLQQLIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVR
MLDILGEYLQKKHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLAT
ADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHL
VIQRMDTTGRTVLDKKSAGTNNNPFNKEDLNAILKFGAEDLFKDEEDGDEEPTCDIDEIL
RRAETRDEGPSTVGDELLSAFKVASFAAFEEESEPVNQPNDNDDESKDWAEIIPENFRKK
VEEEEKSKEMEDLYLPPRSRKTLQQINQSGEGRVRKRKKLSADDSEEGEDSGSEVDGSDD
ERPKKRGRPRVTPRENIKSFTDAEIRRFVKSYKKFPAPLKRLDDIAADAELQEKPMSELR
FLGDQLKSRCEACLSEFESTAKENKGEEEGKGPGRKRGRGPTFKIGGVMVNAKSFSAAVK
ELEPLEQALPSDSEQRSNWHIDIKLKPANFDCDWSSEDDSRLLRGIYQHGMGSWEIIKMD
NNLKLGDKLLPNGSKLQLKKINTRAEYLLKVLKKQIDSKLGVTKARKPRKPKETKTAITK
EIIEENDSSGEESNKSKSKVEKVSTKKEEEVVVKKETKEEVEEIVEEKKKEKKAKREKKE
NKKAKKAKQAAGPMHFTANNEPRALDVLGDLDPSIFNECKEKMRPVKKALKALDRPDQSL
SEAEQVAHTRQCLVQIGNQINTCLEEYRDPEQIKEWRSNLWYFVSKFTEFDAKKLYKLYK
HATKKGGESNTSATSSPEKKEESSNVKKHTEKHIEKQVESIKESRTQKRKIEDTEENSNS
SCTPSKKHLSIISAVNSISNTSTVTIGATTITPITSTPNSTSSTTNSVDTPRHKEKESKY
KDMKRDRERDRDRDRAHGDRSMDRMSGSKDERIRRDSGGYSISGHYSGSREDDHWLSRDG
RDMRDGRLSIPRFGDHKRDRFDSYGRMSSGYHRDRDRDRDRNIHMNDKRSDYYRYSSGPP
SYGYGPGGYGGGGGGGYPPSDIPPSHFRGRGYPGDNYPSEWRPNKDYRRDYDRRPPPPNA
NS
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaaaacgttagagtctgagtctggtaaagaatcgggatctgattctgaaaat
gaaagtaaaagtgatagttcttcttctggaagcaatacaggatctggttctggatcagaa
agtgactctagctcctcaagtggttccgggtctggatcaggttctgattctgataaatca
gagaagtcggatgcacctgcacaaagtgatagcttccagagcaaaagttcaaatcacagt
acagaaacaaaagttaggcttaagaatgagtctagtcgcgagtgggatgagaatcctgac
atttatggaatcagaagatctagccgttctaggaaagagcctgaaaggcttgctacacaa
cgtgaaagcgatagcgatagtcgcaagaaatttaaaaaaaagggttcacataattcatgg
aactcagacagttcagattctgaatctgataatgttgaaagcaggagaccaccacctagt
aagtcgttgaatagacgcgcggcacaaaaagccaaagaaaaaggaaggataaggaaaaaa
cgaatttcagaatcatctgaaaattcttcttttgatagtgatgataacaggaggcaagtt
acaagaagaagtggaactgctattagttacaaagaggaaagtgaagagagaactgacagt
gaagatcttgtagaaattgaagaaggtaacactgcaaatccagaaccagataatacagaa
acaattgaacgaattttgggacaaagagttggtaaaaagggagttacaggcaatgtcaca
acaatttatgctatagaagaaaatggcaatccaaatccagaggatttgtctaatgaagaa
accgaactgcaatattcaataaaatggaagggatggtctcatatacataatacatgggaa
tcagaagagtcattgaaagcacaaaaagtaaagggattaaaaaaattagataattttatt
aaacgagaacgggaaatcaaacagtggcgggattatgctggacccgaagatatagattac
tttgaatgccaattagaacttcaacaagatctcctgaaaagttacaataatgttgaaaga
attattgctgaatataacaaacctgattcagatcatccagattattattgtaaatgggaa
agtttaccctatgctgaggctacatgggaagatggagcattgattgttaaaaaatggcca
gagaaaataaaagaatttcgcgaaagagaagagtcaaaaagaacaccaagcaaacattgc
aaagttcttaagtctaggcccaaattccatcagttaaaaggacaaccagactatatggga
aaaggtcgggatttgactcttagagactatcaaatggatggattgaactggatgatccat
tcttggtgcaaagagaatagtgttattttagcagatgaaatgggtcttggcaaaactata
caaacaatatgcttcctttattatttattccacacacatcagctttatgggccattttta
ttagtggtgcccctttcgacaatgacttcctggcaaagagaaatgtcacaatgggcacca
gatatgaattttgttacatatctgggtgacgttacttcccgtaatgttattagagagtat
gagtggtgttatagctcaaagagattaaaatttaacgccatactcacgacatatgaaata
gtacttaaggataaagcgtttctgggtgccttaaattgggccgtactgttagtagacgaa
gctcatcgattaaagaacgatgattcgctcttgtataaagctctcgctgaatttcatacg
aatcaccggctcctaataactggtacaccattgcaaaacagtttaaaggaattatgggcc
ttattacactttataatgcctaccaaatttagttcatgggaggaatttgaaaaagagcat
gataatgcagctcaaaagggatattccaaattacataaacaattagaaccatttattttg
cgacgtgttaagaaagatgtagaaaaatctttgcccgctaaagttgaacaaatattacga
gtagaaatgacatctttgcaaaaacaatattataaatggatattaaccaagaattataat
gcattacggaaaggtgttaaaggttctactatgacgttcttgaatattgttattgaatta
aaaaaatgctgtaaccatgctttccttacaaaacctactgaaagtgaaaggaaggacaat
aacgaagattatttacagcaactaattcgcggttctggaaaattagttcttcttgataaa
ttattggtgagattacgagaaacaggtcatagggtcttaatatttagtcaaatggtcagg
atgttagatattcttggagaatatctacaaaagaaacattttccattccaaagattagat
ggaagtataaaaggagaattacgaaaacaagcattagatcattttaatgctgaaggatcg
caagatttttgctttttattatcaacaagagcaggtggtcttggtatcaaccttgctact
gctgataccgttattatttttgattcagattggaatccacaaaatgatttacaagcacaa
gctagagcacatcgtattggacaaaagaatcaggtaaatatttaccgcttagtaacaaaa
aattctgtagaggaggaaatagtagaaagagcaaagcaaaaaatggttctggatcatctt
gtaattcaacggatggatacaactggtcgaacagtattagataaaaaaagtgcagggacc
aataacaatccatttaataaagaagatttaaatgctattttaaaatttggagctgaagat
ttatttaaagatgaagaggacggagatgaagaacccacttgtgatattgatgaaattctg
aggagagcagaaacaagagatgaagggccttcaacagttggagatgaactgttatcagca
ttcaaagttgctagttttgcagcattcgaagaagaatccgaaccagttaatcaacccaat
gataatgatgatgagagtaaagattgggccgaaattattcctgaaaatttcagaaaaaaa
gttgaagaagaagagaagtcaaaagaaatggaggatttatatttacctccaagaagtcga
aaaacattgcagcaaattaatcaaagtggagaaggaagagtaagaaagcggaaaaagcta
tctgccgatgatagtgaagaaggagaggattccggaagtgaggttgatggtagcgatgat
gagcgtcctaagaaaagaggtagaccaagggttacgccgcgagaaaatattaaaagtttc
actgatgcagagatacgaaggtttgttaaaagctataaaaaattccctgcaccattgaaa
cgattagatgatattgcggcggatgcagaattgcaagaaaagccaatgtcagaattacgc
ttcttaggagatcaactaaaatctagatgtgaagcttgtttatccgagtttgaaagtacc
gcgaaagagaataaaggtgaagaagagggtaaaggtcctggtcgtaagagaggtagaggt
cctacatttaaaattgggggagttatggtcaacgcaaaatctttctctgccgcggtaaag
gaattagagcctctagaacaagctttaccatcggattcggaacaacgatctaattggcat
attgatattaaattgaaaccggcaaattttgattgtgattggagctccgaagatgattct
aggcttttaagaggtatataccaacatggcatgggttcatgggaaatcataaaaatggat
aataatttgaaactgggtgataaacttctcccaaatggtagcaaacttcaattaaaaaaa
ataaacactcgagccgaatatctactaaaagtactcaaaaaacaaattgactccaaatta
ggagtgactaaagcaagaaaaccaagaaaaccaaaagaaacaaaaactgcaattacaaaa
gaaattatagaggaaaatgatagttcaggtgaagaaagtaataaatctaaatccaaagtt
gaaaaggtatctacaaagaaagaagaagaggttgtcgtaaagaaagaaactaaagaagaa
gtagaagagatagtagaagaaaaaaagaaggaaaagaaagctaaaagggagaaaaaagaa
aataagaaggctaaaaaagcaaaacaagcagcgggtccgatgcattttactgctaataat
gaaccaagagctcttgatgttcttggtgatttggatccttctatatttaatgagtgcaaa
gaaaagatgagaccagtaaagaaggcacttaaggctttggatagaccagaccagtctttg
agcgaagcggaacaagtcgctcacacaagacagtgtcttgtacaaattggaaaccaaatt
aacacttgtctagaagaatatagagatcctgaacaaatcaaagaatggagaagtaattta
tggtattttgtatctaaatttacagaattcgatgcgaagaaactttataaattgtataaa
catgcgacgaaaaaaggaggtgaaagtaatacaagtgctacgtctagcccagaaaagaaa
gaagaatcaagtaatgtaaagaagcataccgaaaaacatatcgaaaagcaagtagaaagt
attaaagagagtagaacacaaaaacgaaagattgaagatacagaagaaaattcaaatagt
agctgcacaccgagtaagaaacatctctcgattatatctgctgtaaacagtatcagcaat
acatctacagttactattggtgctaccaccattactcccattacgtcgacgccaaattct
acttcaagtaccactaatagtgtggacacgccacgacacaaggagaaagaatcaaaatac
aaagacatgaagagagatcgagaacgtgatagggacagagatagagcgcatggtgataga
agtatggacaggatgagtggaagtaaagatgagcgaattaggagagatagcggcggttac
agtataagtggacactacagtggaagcagagaggatgaccattggttatcccgtgatgga
agagatatgcgagatggaagattatcaatacctagatttggagatcataaacgtgaccgg
tttgattcttatggacgaatgtctagtggatatcatcgtgacagagatcgagatcgcgac
cgtaatatccatatgaatgacaaacggagtgattattatagatattcatcaggaccaccc
agttatggatacggtccaggaggatatggaggtggaggtggcggtggttatcctccatct
gatattcctccgagccactttagaggtcgaggttaccctggagataattatcctagcgaa
tggcgaccaaacaaagattatagacgagactatgatagaagaccacctccgccaaatgct
aactcctag
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