Bombus vancouverensis nearcticus: 117159934
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Entry
117159934 CDS
T07628
Name
(RefSeq) nucleoporin Gle1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
bvan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117159934
03015 mRNA surveillance pathway
117159934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117159934
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117159934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
117159934
NCBI-ProteinID:
XP_033196082
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MPHFVSTKDEIVQNMEDIASDFACLKISALQKASRISGEVDKITIGPDSIVNESESERSE
NIENERNSCNITVPQKSVCPQHKIYMQGGITFSVKKILLESEYQRKEEVQKKIACHWQHM
KENGKVIQKRMAMSRSHMAKERERKSKENYACILAEERMAEQEEIRKRHEQQKEVEEYRK
EMKEKEELTKEIMILRNIYNQKNNDFKKYAMEHCNCMEHCKDKNSFAIILSSYDTKLEEL
HLQLKFIDEKIKIGDITPADLNIMVKLVQQIDEMLSIFKSEIDKINVRCEVNSTGAENTV
HSHTTPLSDSQQAFSNSQTVHEPVISEQTSTDNEVQKYEDEEKRGNVQTENMISTNISQE
TSLIVNVERNVSTTESDKDHLYKYVDKELLEIYVNNKKFLENYVKIFDEFLQSPSMKKFR
FECQKAINIPVNAISGISKQHLTDKYERLHILLMGKSWPNVNEHPHGANFCKNILAKKLV
NQGETLVSSKPKMAFPIAAIIVALWSDHSDFGDLLLSHFYNVCPFTVPIFMPRMVGQSDD
DYYKLMGYKYAEDGTIEKHDKFLKRMSGLMRLYASITITTQRKGIDKTNPHGLQNAWRWL
AAILNFEPRKEISDLCATFLLDMLEVAGNTLWIAYPKQFHKLLILLSEEYYPRMKNVGSI
GSGPLVRLEEFLRNSLAKGSISPPDGQLPPNFW
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcctcattttgtaagcactaaagacgaaattgtgcaaaatatggaggatatcgcttct
gattttgcttgccttaaaatatctgctttgcaaaaagcttctcgtatatcaggtgaagtg
gataaaattacaattggtcccgattcaatagtgaatgaaagtgaaagtgaaagatcagaa
aatatagaaaatgaacggaattcttgtaatattacagttccacaaaaatctgtctgccca
cagcataaaatttatatgcaaggtggtattaccttctcagttaaaaagattctcttagaa
agcgaatatcaaaggaaagaagaagttcagaaaaaaattgcatgtcattggcaacatatg
aaagaaaatgggaaagttatacagaaacgtatggcaatgtcgcgttcacatatggctaaa
gaacgtgaacgcaaaagtaaggagaactatgcatgtatactagcagaagaaagaatggca
gaacaggaagaaatacgtaaaagacatgaacaacagaaagaagttgaagaatacagaaaa
gaaatgaaagagaaagaagaattgaccaaagaaataatgattttaagaaatatatacaac
caaaaaaataatgattttaagaaatatgcaatggaacattgcaattgtatggagcattgt
aaagacaaaaattcttttgccataatattatcttcttatgatacaaaattagaagagctg
cacctccaattgaagtttatagatgaaaaaattaagataggtgacataacacccgccgat
ttgaatattatggtaaaactggttcaacaaattgatgaaatgttaagtatatttaaatca
gaaatagataaaataaatgttcggtgtgaggtaaattcaactggagcagaaaatacagta
cattctcatacgacaccattgtcagattcacaacaggcgtttagcaacagtcaaacagtt
cacgagccagttatttcagaacaaacaagtactgataacgaagtacaaaaatatgaagac
gaagaaaaaaggggaaatgtgcaaacagagaacatgatttctacaaatatttcacaagaa
acatctctaattgttaatgtagaacgaaatgtatcaacgaccgaatcagataaagatcat
ttgtataaatatgtcgataaagaattgttagaaatatatgtgaataataaaaaattttta
gaaaattatgtaaaaatatttgatgagtttttacaatctccaagtatgaaaaaatttaga
tttgaatgtcaaaaagcaataaatatacctgtaaatgcaatatctggcattagtaaacaa
catctgacagataaatatgaaagattacatattctgcttatgggaaaatcttggccaaat
gttaatgaacatccacatggggcaaatttttgtaaaaatattctagctaaaaaattagtt
aatcaaggtgagacgcttgtttcaagtaaaccaaagatggcatttcccatcgcagctata
atcgtagctctttggagcgatcattccgatttcggagatttgcttttatcacatttttac
aatgtttgtccgtttacggttcctatctttatgccaaggatggtaggacaatcggatgat
gattattataaattaatgggttataaatatgctgaagatggtacaattgaaaagcatgat
aaatttttgaaaagaatgtccggtttaatgagactgtatgcttctattactatcacgact
caaaggaaaggaattgataaaactaatccacatggactccaaaatgcatggcgatggttg
gctgctattttaaattttgaaccgcgaaaggaaatatcagatctttgtgcaactttctta
ttggatatgcttgaagttgctggaaatacattatggattgcttatccaaaacaattccat
aagttgttaattttattgtcggaagaatattatccacgcatgaaaaatgtaggatctatc
ggcagtggtccattggtacgacttgaagaatttttgagaaatagcttagcaaaaggttct
atatcccctcctgatggtcaacttcctccaaatttttggtga
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