Bombus vancouverensis nearcticus: 117160050
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Entry
117160050 CDS
T07628
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117160050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117160050
Enzymes [BR:
bvan01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
117160050
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117160050
mRNA degradation factors
5'-3' decay
Decapping complex
117160050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Orthopox_F6
Motif
Other DBs
NCBI-GeneID:
117160050
NCBI-ProteinID:
XP_033196341
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MVDHSIPSDILDDLSSRFIINVPEEERKDLVRICFQIELAHWFYLDFYCTDENPKLRPCS
MREFATHIFFHIPFLKPHVANIDSILEQWRDYKQNVPTFGAIVLNEDLTKVLLVQSYWAK
SSWSFPKGKVNEDEDPSRCAVREVLEETGFDISNLIDENEYIESVINEQLVRLYIICGVQ
KDTKFQPKTRKEIKNVEWFSLADLPNNKKDMTPKVKTGVGPNAFFMVIPFVRRMRRWIQE
KHLREKNANTIRRHRHKSLGDVDTVPKNKRQLLPHSVQNDIPSFKDVKNFRQCNTSPARN
RRSVHDCKNVKTAAIKRNLFGDQNEDETSAILAKQLTDSPQNQQSYSFLMDPAIQSVKCN
EFSYKAQAKVLTMESKDQISREFRNAEFPDGNLKSLLFGKAANKLQADLKTIPSPFVLMN
HDASRFFPIDHVKAQNHSMEYYSMTWANFKFDKQAILDCL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcattcaataccatccgacatactcgacgatttaagcagtcgatttattatc
aacgtacctgaagaagagaggaaagatttagttcgaatatgttttcaaatcgaattagct
cattggttttatttggatttttattgtacagatgaaaatccaaagttgagaccatgtagc
atgagagaatttgccacgcatattttttttcatataccgtttctaaaacctcatgtagct
aacatagatagtattcttgaacaatggcgtgattataaacaaaatgttccaacctttgga
gcgattgtattgaacgaagatttaactaaagtgttacttgttcaaagttattgggcaaaa
agtagttggagttttcctaaaggcaaagttaatgaggatgaagatccatctcgttgtgct
gttcgagaagttttggaagaaactggttttgatatttcaaatttaatagatgaaaatgaa
tacattgaatcggtaataaatgagcaattggtaagattgtacataatatgtggtgtacaa
aaagatacgaaatttcaaccaaaaacaaggaaagaaataaaaaatgtagaatggttctct
cttgctgatttacctaataacaagaaagatatgaccccaaaagtaaaaacaggagttggt
ccaaatgcatttttcatggttattccttttgtaaggagaatgagacgttggatacaagag
aaacatttacgtgagaaaaatgcaaacactatacgaagacacagacacaaatctctgggt
gacgttgacactgttccaaagaataaacggcaattacttcctcattctgttcagaacgat
attccgagcttcaaagacgttaaaaactttcgacaatgtaatacttcaccagcaaggaat
cgacgtagcgtacatgattgtaaaaatgtaaaaacagcagcgatcaaacgtaatctattc
ggggatcagaatgaagatgaaacgtcagccatactcgccaaacaattaaccgacagtcca
caaaatcaacaatcatattcatttttaatggatccagctatccagtctgtaaaatgcaat
gaatttagttataaagctcaagctaaagttctaactatggaatcgaaagatcaaatatcc
agagaatttcggaatgcagaattccccgatggaaatttaaaatctttattatttggcaaa
gcagcaaataaattgcaagcagatttaaaaactataccttctccgtttgtgctaatgaat
cacgacgcatcgcgtttcttcccaatagatcatgtaaaagcccaaaaccattctatggaa
tattattcaatgacttgggcaaactttaaatttgacaaacaagcaatacttgattgttta
taa
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