Bombus vancouverensis nearcticus: 117160172
Help
Entry
117160172 CDS
T07628
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvan03009
]
117160172
Enzymes [BR:
bvan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
117160172
Ribosome biogenesis [BR:
bvan03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117160172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
BMT5-like
FtsJ
Cwf_Cwc_15
GCD14
Motif
Other DBs
NCBI-GeneID:
117160172
NCBI-ProteinID:
XP_033196610
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MGRKAKFNDTTVSSGHGRKAKKQGDPTFPKGVLVKEGKELSHRQKQRARKRLLKKQKLSE
KVRKLQQNNGEKVDDAVTEDNIKDISKLLKIKKTKKSLKEGPRNDSFGRKNDQMQFDNDI
NISDNEGVIQDKQQKIKRKKLLDNDTEDETDKGSSDNEEYGQNGEMDYEEVDQSEEDGDS
SNNDDVDLLPIEKANKKLKKKQEEEQKLAEEEMHDMTLQQCVFTFPTKEELADVTNLKDV
QQRIKDVIMILSDFKRLRDINRSRTEYMDLLRSDLCTYYSYNNFLMEKLIQIFPLDELLE
FLEASEVQRPMTIRTNILKTRRRDLAEALINRGVNLDPIGKWTKVGLVIYSSQVPMGATP
EYLAGHYILQGASSFLPVMALDPKENERVLDMCAAPGGKSSHIAALMKNTGVLFSNDANE
ERIKAVVGNFHRLGITNSIVCTYDGRKLPTVIKSFDRVLLDAPCTGTGVVSKDPSVKTNK
DEVDIQRCCTLQKELLLAAIDCANARSESGGIIVYSTCSILPEENEWVIDFALKKRDVKL
IPTGLEFGAEGFTSYRQYRFHPSLKLTKRFYPHVHNMDGFFVAKLKKFSNIVHKNKDAEE
ETFD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggacgaaaagctaagtttaatgatacaactgtgtcgagtggtcatggaagaaaagca
aagaagcaaggagatccaacatttccaaagggagtactagtaaaagaaggaaaagagtta
agtcatagacagaagcaacgagcaaggaaaagattattaaagaaacaaaagttaagtgaa
aaagtaaggaaattacagcaaaataatggcgagaaggtggatgacgctgtaactgaagac
aatataaaagatatctcaaaactattaaaaataaagaaaacgaagaaatctcttaaagaa
ggaccaagaaatgacagtttcggtcgtaaaaatgatcaaatgcagtttgacaatgatatt
aatatatctgataatgaaggagtaatacaagacaagcaacaaaagattaaaagaaagaaa
ttacttgacaatgacacagaggacgaaactgataaaggatccagtgacaatgaagaatat
ggccaaaatggagaaatggattatgaggaagtagatcaaagtgaggaagatggtgatagt
tctaataacgatgatgttgatctacttcctattgaaaaagcaaataagaagttgaaaaag
aagcaagaagaagaacaaaagctagcagaggaggaaatgcatgatatgaccctacagcaa
tgtgtctttacttttcccactaaagaagagcttgcagatgttactaatctgaaagatgta
caacaacgtataaaagacgttattatgatattatcagattttaaaaggttgcgcgatata
aacagatcgcgtactgaatatatggaccttcttagaagtgatttatgtacatactatagt
tataataatttcttgatggaaaaattgatacaaatatttccactggacgagttattagaa
tttttggaagcaagtgaagtccagaggcctatgacgatacgaacgaatatattgaaaaca
cgtcgtcgcgacttagctgaagctttgatcaacagaggggtcaatttagatcctattggc
aaatggacaaaagttggattagtgatttattcgtcgcaagttcctatgggtgcgacacca
gagtatttagcaggacattacattcttcagggtgcatctagcttcttacctgttatggct
ttggatcctaaagaaaacgagagggttcttgatatgtgtgccgcgcccggaggaaaatca
tcacacatagcagcgcttatgaaaaacacaggtgtactcttctcgaacgatgcaaacgaa
gaaaggataaaagcagttgtcggcaattttcacagacttggcatcacgaattcaatcgtt
tgtacttacgatgggcgaaagttaccaacagtgattaaaagtttcgatagagtattatta
gatgcaccatgcactggtactggtgttgtttcaaaagatccaagtgttaaaacaaacaaa
gatgaagtagatatacagcgttgttgtacattacaaaaggaattacttttggcggctata
gattgtgctaatgcacgttcggaatccggtgggattatcgtttattctacgtgttcgatt
cttccggaagaaaatgaatgggttattgattttgctcttaagaaacgtgatgttaaatta
ataccaactggactagaatttggcgccgaaggttttaccagttatagacaatacagattt
catccttcgttgaaattaaccaaacgattttatccccatgtgcataatatggacggattt
ttcgtagcgaaattaaagaagttctccaatattgttcacaaaaacaaagatgcagaggaa
gaaacttttgattaa
DBGET
integrated database retrieval system
