Bombus vancouverensis nearcticus: 117160279
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Entry
117160279 CDS
T07628
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117160279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
117160279
NCBI-ProteinID:
XP_033196825
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MARAFSQAIFAILLLAIIIVSDIAEPQHGRERVIPARGSIQRGDMSPTEVSEDRHYWPRQ
IIHSPRGAQIKRKHPCEQSSCYPSTGNLLIGRKNRLSASSTCGLTKPERYCIVSHLKERK
KCFFCDASSPNKQHNIENVVTDKNWWQAENGVENVTIRFDLEAEFHFTHSIIRFKTFRPA
KMLIERSSDFGKTWQVYRYFAHNCEKYFPGVSTEQPQRLTDVICETRYSAVAPSSGGDVI
FRVLPQNLEIDNPYSKEVQNQLKITNLRINMTRLHTLGDDLLDDRAEIREKYYYAIQNIV
IRGSCSCYGHASRCLPLPGVPDEENMVHGRCECTHNTTGLNCEKCQDFYNDLPWKPAVGK
QTNACRPCICNNHTNSCHFDEAVYENSGRVSGGVCDDCQHNTMGKNCELCKPFFYHDVTK
DITHPEACLPCDCDLGGSLDDGICDSITNPLTGGESGRCNCKANVEGRRCDHCKNGFWNF
DPENPEGCQACTCNILGTIDNRGCNMVTGECTCKRYVTARDCNQCLPEYWGLSEDPDGCK
PCDCDPGGSYENSCDVVTGQCRCRPHVSGRTCNQPEQSYYTGSLDFLIYEGELSRASDNC
QVVIREPYRDGRNSTWTGTGFMKALEGSVLNFTIDDIRKSLWYDIIIRYEPIQAGSWENV
QIIIERESPVDPNGPCAEWRPEYDQLYAQLPLRSRSVVVQPSVCLEAGKRYNILLQFRKF
NNHMDTPSASILVDSIVLRPKIDSIPFFKTPVVGELRRQEYEIYHCSDFYNDFNAITNNI
PEVCKKYQNSIGYYVYDGAHSCECNPTGSHSLLCENYGGTCPCKQNVVGRRCDRCAPGTY
GFSPEGCIPCDCDGVGALDNFCDIETGRCKCRPNTYGRTCGQCEPGFWNFPHCQRCECNG
HAESCDSKTGACINCRDYTTGHNCDRCIETYYGDPRIGVDIPCRACPCPGTIDSGHSYAE
SCSLDPVTHDVICECFDGYTGPRCESCAENYFGNPEVPGGSCESCNCNNNTDLRRPGNCD
PETGRCLQCLYNTDGTNCQICKAGFYGNALEQDCEDCMCDVLGTDRNAGPCDHRTGQCSC
LPHVIGLLCDSCEENHWRIASGQGCDPCECDAVGSVSDRCNPYDGTCECRPGFGGRRCNE
CQTNYWGNPNVECYPCDCDLTGSASQQCDRETGMCVCHKGIGGEKCDQCDRGYYGNAPQC
NPCGECFDNWDLTLTGLRNKTNLVIEEASRIQKVGTTGVYSQEFDDMVESLDQVQALISN
ASIRSQDLDELNDLAIDLNNKKLESTKKLEEVNNLLENVSQRVNLGDAALKNLKNRTNNL
HQAAADLKENATRLQEENVLGALNVTQQMAEQSRQAEKMANDTSNVLADAERFRKHTESL
LAKNRAFVIEAQERNQESLNKINEELKNFDGIMPGLNLEMCGDNVTDCSSVCGGAGCGFC
GGLSCDAGAVTKANQALDVAKKQAAEIKNHKDEAEQLLRNMVQVKRDATTARSNAQDAFN
YALRARNLTDTLSKDLADINKRVRNILEEDQPTPAMVRDLANEVLAKNIKLKPDEIKILA
DRIKSIVGSLTDSEKILADTRDDLQLAEKLKNDADRAKEEAIAKQNLANKVVILLSDAQR
AQDRAQAAIDQAERDVRRFENDLEEIAEMTRGAQMQANSTTQTVDSLDARLKQLQTQSVR
NDFVLNEEIRVEARKVADEAQKVDAKTKELAMEYRKADEALNSRANKSKGNILRAKKLLQ
KASELTADTSTKLKDLDGMESVYRDNERMLSDLMAEVDSLNGEMEKYLAEIEQKAQRYKH
CTP
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagcattttctcaggcaatttttgcaatactattacttgcaataattattgtg
tcggatatcgcagagcctcaacatggcagggaaagggttattccagccagaggatcaatc
cagagaggagatatgtcacctacggaggtgagcgaagatcgccattattggccaaggcag
atcattcacagtccaagaggcgcacaaataaagaggaagcatccctgcgagcagagctca
tgttacccctctacaggaaatttattaatcggtcgaaaaaatcgattgtccgcatcatct
acttgcggtcttacaaaacctgaaaggtactgcatcgtttcgcatttaaaggagcggaag
aagtgctttttttgcgacgcatcgtcgcccaacaagcaacataacatcgaaaatgtagtt
accgataaaaattggtggcaagcggaaaatggcgtggagaacgtaacgatacgcttcgat
ctggaagcggagttccatttcacccacagcatcatccgtttcaaaacgtttagaccggcg
aagatgttgattgaacgatcgtccgattttggtaaaacgtggcaagtgtatcgatacttc
gcgcacaattgcgaaaagtacttccctggagtgtctacggaacaacctcagagactgacg
gatgttatctgcgagacgaggtattccgccgtggcgccatcgtctggaggtgatgttatc
tttagagtattgcctcagaatttggagatagacaacccctactccaaggaagtgcagaac
caactgaaaataacgaaccttcgcataaacatgactaggttgcacactctaggagacgat
cttctcgacgaccgcgcagaaattcgagagaaatattactatgccattcaaaacatagtg
attcgcggatcttgttcctgttacggtcatgcatctagatgccttccgcttcctggagtc
cctgatgaggaaaatatggtgcacggcagatgcgagtgtactcataatactacgggattg
aattgtgaaaaatgtcaagacttctacaatgatcttccgtggaaaccagctgttggaaag
cagacgaacgcttgtagaccttgtatttgtaacaatcacacgaactcttgtcatttcgac
gaagctgtttatgaaaattctggaagagtatctggcggtgtttgcgatgactgtcaacac
aatactatgggaaagaactgcgaactctgcaaaccattcttctatcacgacgtgaccaaa
gatattactcatcctgaagcatgtctgccttgtgactgcgacctaggtggttccttggac
gacggtatatgcgattcgataaccaatcctctcaccggaggcgaatctggccgctgtaac
tgtaaagcaaatgtcgaaggtcgtcgttgcgatcattgtaaaaatggtttctggaacttc
gatcctgaaaatcccgagggatgtcaagcttgcacctgcaacatcctgggtaccatcgac
aatcgtggatgtaacatggtgactggcgaatgtacttgcaagcgttacgttactgctcgc
gattgtaaccaatgtctcccagaatattggggactttcggaagatccagacggttgcaag
ccttgcgattgcgatcctggtggttcctatgagaattcttgcgacgtagtcactggccag
tgccgctgtagacctcacgtcagcggcagaacttgtaaccaacctgaacaaagctactac
actggatcgttagactttctcatttacgagggtgaattatccagagccagcgataattgc
caagtggtgataagagagccctatcgcgacggaaggaatagtacgtggaccggaactggc
tttatgaaagcgctcgaaggttcagtgttgaatttcacgatcgacgatatacgtaaaagt
ttatggtacgatatcatcatacgatatgaaccaattcaggctggatcttgggagaatgtt
caaataatcatcgagagagaaagtccagtggatccgaatggtccttgtgccgaatggaga
ccagagtacgatcaactatacgcgcaacttcctttaagatcgagaagcgtcgttgtgcaa
ccatccgtttgtttggaagcagggaaacgatacaatattctgttacaattccgtaaattc
aataatcacatggacacaccgtccgcgtctattttggtcgactctatcgttctgagacca
aaaatagactccattcctttcttcaaaacgccggtagttggcgaacttcgtcggcaggaa
tacgaaatatatcattgtagtgatttttataacgattttaacgccataacgaataatatc
ccggaagtttgcaagaagtaccaaaatagtatcggttactacgtttatgacggagcacat
tcttgcgagtgtaatccgactggatcgcacagtttgctgtgtgaaaattacggaggcacg
tgtccttgtaaacaaaacgttgttggcaggcgttgcgatcgttgcgcgcctggtacttac
ggatttagtccggagggttgcattccctgtgattgcgatggtgtaggggcgctggataat
ttttgcgacattgaaacaggtcgatgcaagtgccgaccaaatacttatggtagaacttgc
ggtcaatgcgagcctggcttctggaatttccctcattgtcaacggtgcgagtgtaatggt
catgctgaaagttgtgattctaagactggcgcctgtataaattgtcgggactacacgact
ggacacaattgcgatagatgtatcgagacgtattacggtgatcctaggattggtgtggat
attccatgtagagcgtgcccttgtccgggaaccatagactctggacattcgtacgccgag
agttgttccctagacccggtgactcacgacgtgatttgcgaatgtttcgatggatacacc
ggtccacgttgtgaaagttgcgcggagaactatttcggtaatcctgaagttcccggtggt
agctgtgagtcgtgtaattgcaacaataacacggacttacgtcgacctggaaattgcgat
cctgaaactggacgctgtcttcaatgtctctacaacactgatggaaccaactgtcagatt
tgcaaggcaggattttacggaaatgctctagaacaggattgcgaggactgcatgtgcgac
gttttgggtacagatagaaacgctggtccttgtgaccaccgaactggacagtgttcctgc
ttgcctcacgttatcggtttactctgcgattcttgtgaagagaatcattggagaattgcc
agtggccaaggttgcgatccttgcgagtgtgacgcggttgggagcgtttccgacagatgt
aatccgtacgacggtacttgcgagtgcagaccaggtttcggaggaagacgttgtaacgag
tgtcaaaccaactactggggaaaccctaatgtcgaatgttatccgtgtgattgtgattta
accggttctgccagtcagcagtgcgacagagaaacaggaatgtgtgtctgtcacaaagga
atcggtggcgaaaaatgtgatcagtgcgatcgtggctactatggaaatgcgcctcaatgc
aatccttgcggagagtgtttcgacaattgggacttgacgctgactggtttgagaaacaag
acgaatcttgtgatcgaagaggcatcgagaattcaaaaggttggaacgaccggtgtctat
agccaagaattcgacgacatggtcgaatctctggatcaagtccaagcactgatcagtaac
gcttccattagaagtcaagatttagacgaattaaatgacttggctatagatttgaataat
aagaaattagaatccaccaagaaattagaagaagtgaacaatcttttggagaatgtcagt
caaagagtaaatctaggggatgctgctcttaaaaatttgaaaaatagaacgaacaacttg
caccaagctgctgctgatcttaaagaaaatgcgactagattgcaggaagagaatgtccta
ggcgctcttaacgttacccagcaaatggcggaacagtctagacaagcggaaaaaatggcc
aacgacactagcaacgttctggctgacgctgaaagattccgcaaacatactgagagcttg
ttagctaagaatcgtgctttcgtgatagaggcacaggagagaaaccaggagtcattgaat
aaaataaatgaggaattgaagaactttgatggaattatgccaggattaaatctcgaaatg
tgtggagataacgtgacggattgcagcagcgtctgtggtggcgctggttgtggtttctgt
ggtggactgtcttgcgacgcgggtgctgtgaccaaggctaatcaagctctggacgtagct
aagaagcaggctgctgagatcaagaaccacaaggacgaggcagaacagttacttcgtaat
atggttcaagtgaaacgcgatgcaacgacagccaggtcgaatgctcaagatgccttcaac
tacgccttaagagctcgtaatctaaccgataccttgagcaaagatctcgctgacataaac
aaacgagtccgtaacattttggaggaggaccaacccacaccagctatggtcagagacttg
gccaacgaagtattggctaagaacatcaaactaaagcccgacgagatcaaaatattagcc
gatcgtattaagagcatcgtcggttccttgaccgattccgagaaaattctcgcggatact
agggacgaccttcagttggccgaaaagttaaagaatgatgctgacagagcaaaagaggaa
gcgatcgcgaaacaaaatctagctaacaaagtggtaattttattgagtgatgctcagagg
gctcaagatcgagcacaagcagctatcgatcaagctgaacgcgatgtcaggagattcgaa
aatgacttggaagagatagccgagatgaccaggggagctcagatgcaggcaaacagcacc
actcagacggtcgactctttggacgctcgcttgaaacaattacaaacgcaatcggtcaga
aacgattttgttttgaatgaagaaatcagggtcgaggcgcggaaagtagctgatgaagcg
caaaaggtagatgctaagacgaaggaactcgctatggaatacagaaaagcggacgaagcg
ttgaattcgagggcaaacaagagcaaagggaatatattgagggcgaagaagctcttacaa
aaagcctccgagttgacagccgatacatcgacgaaattgaaggacttggacggtatggag
agtgtttacagagataacgaaagaatgctatccgatttgatggcggaggttgattcttta
aatggagagatggagaaatatttagcggaaatcgaacagaaagcccaacggtacaagcac
tgtactccttga
DBGET
integrated database retrieval system
