Bombus vancouverensis nearcticus: 117160391
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Entry
117160391 CDS
T07628
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117160391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117160391
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117160391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
CSTF1_dimer
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_WDR75_2nd
Beta-prop_IFT140_2nd
PROPPIN
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_WDR19_2nd
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
117160391
NCBI-ProteinID:
XP_033197015
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MKEPEVDPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLI
GLAHEPDRSKKDTSNLSSFTSTFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGN
CRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEE
VTCLEFHPREPILVSGSRDFSIKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVG
TNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNR
CINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEH
KAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTC
SDDFRARFWFRRMPTH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccagaagtggacccgaaaaatattataaaaagcagagaactcctttacagg
cttatgatcagccaactgttctatgatggacaccagacattggcggtacagctgtcaaat
ataattcaagcagaacctccatgccctccatccgatcgtttacttcatttaatgttgatt
ggtctagctcatgaacctgatcgttctaaaaaggacacgagtaacttatcttctttcaca
tcgacttttgataacactttgggacctggtctagatttagaatttgaaacagaagctcaa
actcaagcaccagaacctgcacaatatgagactgcctatgtaacttcccacaaaggaaac
tgcagagctggagcattttctgcagatggtcagttgatagcaactggatcagtcgatgca
tcaattaaaattttagatgtggatagaatgctagctaaatctgcaccagatgaaatggca
cctggtgatcaaacaggtggtcatccagttataaggacattgtatgatcatttagaagaa
gtgacatgtctggaatttcacccaagagagcctattcttgtatctgggagcagagacttt
tctattaagctgtttgatttcagcaaagccagtgttaaaaaggcattcagaactattaca
gatgcagatcagatacgatgtttatcttttcatcctactggcgattttttagttgttgga
accaatcatccagtagtcaggttatacgatgttaatacagcacagtgctttgtctgtagc
ataccaagtcatcaacatactgctggaataactagtattaagtattctcccgatgcaaaa
acttatgcatcagctggtaaagatggaagtatcaaattatgggatggtgtatcaaaccga
tgtataaatacttttgtgaaagcacatgatggctatgaagtatgttcagtgacttttacg
agaaatggaaagtatttactgtcatcagggaaagattctttgataaaattatgggaactg
tctactagcagatgtctaatagcatatacaggtgctggaactacaggcaaacaagaacat
aaagctcaagctatttttaatcacactgaagactatgtaatgtttcccgatgaagcgaca
acatcattatgtgcatggaattctcgaaatgcatctaggaaacagttactatcattagga
cataatggtccagtaagactgattgtccattctccaaccgctccagcattcttaacatgc
agtgatgattttagagcaagattttggtttagaagaatgcccactcattag
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