Bombus vancouverensis nearcticus: 117160540
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Entry
117160540 CDS
T07628
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03440
Homologous recombination
bvan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117160540
03460 Fanconi anemia pathway
117160540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvan04121
]
117160540
03036 Chromosome and associated proteins [BR:
bvan03036
]
117160540
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117160540
Ubiquitin system [BR:
bvan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117160540
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117160540
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
117160540
FA (Fanconi anemia) pathway
Downstream FA components
117160540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA2
BRCA-2_helical
BRCA-2_OB1
BRCA-2_OB3
BRCA2DBD_OB2
Tower
RTC_insert
Motif
Other DBs
NCBI-GeneID:
117160540
NCBI-ProteinID:
XP_033197246
LinkDB
All DBs
Position
Unknown
AA seq
1347 aa
AA seq
DB search
MHNKSDGFSFGFATASGNSIHVSERALSKARELFNNEFKESDNSEQKFKAENESNTFNAQ
IPDVGFQTTSGQRINVTSEALSKAKELFNNEFKENDNSGQKFKAENEINTFNAQIPDVGF
QTASGKCINVTNEALSKARELFNNELKESDNSEQKFKAENEINTFNAQIPDVGFQTASGQ
RINVTNEALSKAKELFNNEFKENDNSGQKFKAENEINTFNAQIPDVGFQTASGKCINVTN
EALSKARELFNNELKESDNSEQKFKAENGINTFNAQIPDVGFQTASGKCVNVTNEALSKA
KAMFQEEISKDFETILALPKPLQKRKIKDVDDSVSLINKAKSSQFKKLRFSNEFQVLKST
HRNSLNNEEKGNQNTSSVSMQVTLNCDVELKLKDNIMINITETSKKSDEIIDNYVISHEI
ASAVALLADEKDLDFTEQQISPKEIEENDETVSVPSSPVIGGQFIRKKRRSTGRRETTNT
SKNKVDKLACLCNKADKFIDNVEKLNDDYASLNQYINKNDNCLTEKQDLTDKQDQYDSAV
VNDFGDSQLMIDFINQSVTVLEKRLEAALEQEKQISMKQKSKPKPTISKLYFHRKSNTNN
RISWKEISKGEKPILCTDEELVNRKLPPEILDLRADNATMYKFHCADFYGQNIVQNNIDG
IKLEDGACLILDENGYVGITEIKRSFLASPGVDPNLLPIGWVENHYKWIVWKLASMDRIK
LGYIILPRALTPARVMMELKYRYDREIDRSQRSALRKILEKDDVATKRMVLCVSSINKCD
DSDIENKNQLKISSQKLILTDGWYSIQASIDQAMMKHIISGKIKEGTKLLTYGSELLNCD
QGCSPLEIAENVCLKLHTNSTRRARWDMKLGYTVPSGPMCTKLKTIYPNGGLIGKIKVIV
ARVYPMLYHEKTSTGESIFRNARCEEKASIIYEKECRSMIEAFYAKAEKYFHTGKCKSNL
NTDSIDLAAVEWNEDCDRLFKEEFRSEQELEQLKNDCLMKQEKFRQKLESRLQENLPLPR
QVTPLLKIRVIEEETNAILSVWSPSAEVIDILKEGNCISLCNVMPWAKRGNELLLTANRN
TSFIQVNISDNSFRLRTYTALCEISKPTFTPAYGEFDTVGIIASIGNEPYGMKNFQAVYL
AYPHADSVSSYLSILFWHGISSFGYAEILTVGSLVACGNLEWRRATSWNIPVAYCTERSI
FTHNPRDSHLQEPLENLKRLITDVSTYIDTCVVEISEKVQKKSMMRNNFNRDVSNENINA
NKQFNDHVYQEFQGRSLINNQLAKSVAIQKRLEKLQSYGEPSSLSPITLNNSSKRVSLEF
QSPIQSRSGKCTKVHTALHARLTQNPT
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgcataataaaagtgatggtttctcatttggttttgctactgccagtggtaattcaatc
catgtgtctgagagagctttatcaaaagcaagagaactttttaataatgagtttaaagaa
agtgacaactctgaacaaaaattcaaagctgaaaatgaaagtaatacatttaatgcgcaa
ataccagatgttggatttcaaactacaagtggtcaacgcattaatgtgaccagtgaagca
ctatcaaaagcaaaagaactttttaataatgagtttaaagaaaatgataattctggacaa
aaattcaaagctgaaaatgaaattaatacatttaatgcgcaaataccagatgttggattt
caaactgcaagtggtaaatgcattaatgtgaccaatgaagcactatcaaaagcaagagaa
ctttttaataatgagcttaaagaaagtgacaactctgaacaaaaattcaaagctgaaaat
gaaattaatacatttaatgcgcaaataccagatgttggatttcaaactgcaagtggtcaa
cgcattaatgtgaccaatgaagcactatcaaaagcaaaagaactttttaataatgaattt
aaagaaaatgacaattctggacaaaaattcaaagctgaaaatgaaattaatacatttaat
gcgcaaataccagatgtgggatttcaaactgcaagtggtaaatgcattaatgtgaccaat
gaagcactatcaaaagcaagagaactttttaataatgagcttaaagaaagtgacaactct
gaacaaaaattcaaagctgaaaatggaattaatacatttaatgcgcaaataccagatgtt
ggatttcaaactgcaagtggtaaatgcgttaatgtgaccaatgaagcactatcaaaagca
aaagcaatgtttcaagaagaaatctccaaagattttgaaactattcttgcattacctaaa
ccattgcagaagcgaaaaattaaagatgtagatgacagtgtatctttgatcaacaaagca
aaatctagtcagtttaaaaagttacgatttagtaatgagtttcaagtcttaaaatctact
catagaaactcattgaataatgaagaaaaaggaaatcaaaacacatcttcagtatctatg
caagtaactttaaattgtgatgttgaacttaaattaaaagataatattatgattaatatt
actgaaacaagcaagaaaagtgatgaaataatagataactatgtaatttcacatgaaata
gctagtgcagttgcacttttagctgatgaaaaggatttagatttcacggagcaacaaata
tctcctaaggaaattgaagaaaatgatgaaactgtaagtgttccatctagcccagtaata
ggaggacaatttattcgtaaaaagcgaaggagtacaggtagaagagaaactacaaatacc
tcaaaaaataaagtagataagttggcatgtttatgtaataaagcagataaatttatagat
aatgtagaaaagttaaatgatgattatgcaagtctgaaccaatatataaataaaaatgat
aattgtttaacagagaagcaagatttaacagataaacaggatcagtatgactctgcagtc
gttaatgattttggtgactctcaattaatgatagactttataaatcaatctgtaactgta
ttagagaaacgtttagaagctgctttagaacaagaaaaacaaattagtatgaagcaaaaa
agtaagcctaaaccaacaatcagtaaattatattttcacagaaagagtaataccaataat
cgtatatcatggaaagaaattagtaagggagaaaaacctattctatgtacagatgaagag
cttgttaacagaaaattaccacctgaaattttggatctaagagctgataatgcgacaatg
tataaatttcattgtgcagatttttatgggcaaaatattgtgcaaaataatattgatggt
ataaaattggaagatggagcttgtttaattttggatgaaaatggttatgtaggaataaca
gaaattaaaagatcttttttagcaagtccaggtgtagatcctaacttacttcccattggt
tgggtagaaaatcattacaaatggattgtatggaaattagcatcaatggatagaataaaa
ctaggttatatcattctaccaagagctctaactcctgccagggtaatgatggaattgaaa
tatcgttatgacagggaaattgatagatctcaaagatcagctttaagaaaaatattagag
aaagatgatgttgcaaccaagagaatggttttatgtgtatcttctattaataaatgtgat
gattctgatatcgaaaacaaaaatcaattaaaaatatcatcccaaaaattgatattaaca
gatggatggtatagtattcaagcttcaattgatcaggcaatgatgaaacatataatatct
ggcaaaataaaagagggaacaaaattattaacatatggatctgaattattaaattgtgat
caaggatgctcacctttggaaattgcagagaatgtatgtttaaaattacatacaaattca
acaagaagagcaagatgggatatgaagttagggtatacagtaccatcaggaccaatgtgc
actaaattaaagaccatttatccaaatggtggcttaattgggaaaattaaagttatagtt
gcgagggtatatccaatgttatatcatgagaaaacttcaacaggagaatctatttttcga
aatgctagatgcgaagaaaaagctagcattatctatgaaaaggaatgtcggtcaatgata
gaagcattttatgctaaagcagagaaatattttcatactggaaaatgcaaaagtaattta
aatacagacagtatcgatttagcagcagttgaatggaatgaagattgcgacagattattt
aaagaggaatttcgttcggaacaagagctagagcaattaaagaatgattgtctcatgaaa
caggagaaatttagacaaaaattagagtctcgattacaagaaaacttacctctaccgcga
caggttacacctcttttaaaaattcgcgtaattgaggaagaaacaaatgctattctttca
gtttggtctcccagcgcagaagttatagatattttaaaagaaggaaattgtatatcactt
tgtaatgttatgccctgggcaaaaagaggtaatgagttgctattaactgcaaatcgaaat
acatcgtttatccaagtaaacatttctgataatagttttcgtctgagaacatatacagca
ttatgtgaaataagtaagccaaccttcactccagcttatggagaatttgatacagtagga
attattgcttctattggaaatgaaccctatggtatgaaaaattttcaagctgtgtattta
gcatatccacatgcggattctgtgtcttcatatttatcaatactcttttggcatgggata
tcttcttttgggtatgcagaaattttgactgtaggatctcttgttgcctgtgggaattta
gaatggcgtcgagctacatcatggaatataccagtggcatattgcacagaacgaagtatt
tttacgcataatcctcgagacagtcaccttcaggaacctttagaaaatttaaaacgtttg
ataacggatgttagtacgtatatagatacctgtgtggtagaaatttcggagaaagtacaa
aagaaatcaatgatgagaaataatttcaacagagatgtatcaaatgaaaatattaatgct
aacaagcaatttaatgatcatgtatatcaggaattccaaggaaggagtttaataaataat
caactagcaaaatctgttgccatacaaaaacggcttgaaaaattacaatcttatggtgag
ccatctagtctatccccaattacacttaataacagctccaagcgagtatcattggagttt
caatctcccatacaatcaagaagtggaaaatgtacaaaagttcacacagcattacatgca
agacttacacaaaaccctacatga
DBGET
integrated database retrieval system
