Bombus vancouverensis nearcticus: 117160655
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Entry
117160655 CDS
T07628
Name
(RefSeq) nuclear pore complex protein Nup154
KO
K14312
nuclear pore complex protein Nup155
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117160655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117160655
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117160655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
WD40_WDHD1_1st
Beta-prop_EIPR1
Vps39_1
Motif
Other DBs
NCBI-GeneID:
117160655
NCBI-ProteinID:
XP_033197437
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MTLTEMEPLKIHLDALEMAGKVVDIHITADSNFPSLINLMRYNVQGGPTVSGLDDHDYPN
LNGMSLCFPNINQMKAYSKISLPSEIMEHFHHMQCHCMMGLFTEISKAWLTIDSDIYVWS
YENESDVAYFDGLNETIISVGLVKPKAGVFQSYVKYLLILTTTVEITILGVTLTETSDGT
SPEMQLVPEPIFTVATDGIGITTIANTNSGRIFLGGRNGSLYEIYYQAESSWFGKRCKKI
NHSEGPLSFLVPSFVTIALSEEEAIIQISVDDSRNILYTLGDKGTITVWDIDNNGASKVA
SLSQASLVQNAVHVVKTLDSNNFRPLVSISAITESESVHLNLVVVAATGTRFYFSCTAVA
NPTIRPQGLQLIHVRLPPGYAANATVMRPRKVQMAHYRKGTLILVCGGDTETALCLSNDA
YPFTNYLAETQSPLSLDSPVWAMAEILVEPAICIEKQSITQEEPPLLVRQHMEAPRKFIF
LTSQGAIIYVQVRPMDILKQLLLEQRGPDTEAVRAYFQSQSLEQACATCLILATLESSQN
AELAEWATRAFFLYGSQRTTSIGPAIDVHGTNFTNINTGDMRTSTPRVPNYDLRLQGFRP
HAPVGLNTDISLQQFSAKHNGLYLYVGRILRPIWNMRCIKQEIINNKTQISSTISTRQVS
WILSLLQALRSFLNKNTHITKQHGTTRITDGFETTIPSHYQEPIVEERNSLAALKIFITH
ACEVLELWKILCENHLNNIVNCLSKDQINQFSTATFRDLILIGHEISSLLIIHLIDSYLG
DNASVDAVSQRLREVCPNLYRSEDAVCSKANEIILKAKSCTNPEEKECYLQSALKLCKEV
APRLNLSAVCQQFIACQFYSGVLELCLCCAERVDPNNAALHYYKNNEPIEDQEGRFAYIK
RLEIYKEFTTLLDHLYNQSISNPLTPTIPSKPGPPQQNGSTMPVTPAKEILHDIITDALH
SKCEILHASVYAWMIERRLHGELVALAVPSLEAYLTRVNAPDLLWQFYEKNKNHAAAAKI
LDALATKESNVTLSQRVEYLARAVVCMRSDQAGYAPYLGIFLRELEDKVEVARIQQQILD
TICNQHLSGRLSDEASRALKFSLLDITKLYQEYADPLQLWECKLSIIHCSGHQDAMLIQE
IWTNIINNELKDASTAEDKMTILMSKIISLGQEYSGSPHCFPVDFLVKQLEIKACKLNVS
NNGIISGFLQLGVSMEDLLDIYKMIGKDTRTWFNEGNDFHLIESTANLVNYFISHSNITN
TFVKRKIITKCQDVISKCLTTLYSKPHGQELITKLRSIQNVLIRM
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcactgaaatggaaccgcttaaaatacacttagatgccttagaaatggcaggg
aaagtggttgatatacacattacagctgatagcaactttccatccttaattaatcttatg
agatataacgtacaaggtggaccaactgttagtggtcttgatgatcatgattatccaaat
ttaaatgggatgtcattatgttttcctaatataaatcaaatgaaagcatatagtaaaatt
tctttaccatctgagataatggaacattttcatcatatgcaatgtcattgtatgatgggt
ctttttacagaaatttcaaaagcttggcttacaattgatagtgatatatatgtttggtca
tatgaaaatgagtctgatgttgcatattttgatggattaaatgaaactattataagtgta
ggtttagtaaaacccaaagcaggggtgttccaatcttatgtaaaatatttgttgattctt
acaactacagtggaaataactattcttggagttacattaacagaaaccagtgatggcact
tcaccagaaatgcaactagttcctgaaccaattttcacagttgctacggatgggattggc
attacaacaatagctaacactaatagtgggagaattttccttggtggtagaaatggatcc
ctttatgaaatatattatcaggcagaaagtagctggtttgggaaacgttgtaaaaaaata
aatcattctgaaggtccattatcatttttagttccatcatttgtcactatagctttatca
gaagaagaagcaataatacaaatttccgttgatgattcacgaaatattttatacacactc
ggtgataagggaacaattacagtttgggatatcgataataatggtgcgtccaaagtcgcg
tctttgtcacaagcttccttagtacaaaacgctgttcatgttgttaaaacactggatagt
aataattttcgaccattggtgagcatatcagctattacagagtcagaatcagtacattta
aacttagttgtagttgcagctactggaacacgcttttacttcagttgcactgcagttgct
aatccaacaataagacctcaaggtctgcagttaatacatgttagattgccaccaggttat
gctgctaatgctacagtaatgaggccaaggaaagtacaaatggcacattataggaaagga
acattaattcttgtttgcggtggagatacagaaactgctttatgtttaagtaatgatgct
tatccattcacaaattatttagctgaaactcaaagtcctttatccctcgatagtcccgta
tgggcaatggcagaaattcttgtggaaccagctatatgtattgaaaaacaaagtattaca
caagaagaacctcctcttcttgtaaggcagcacatggaagcgccacgaaaatttatcttt
ttgacttctcagggtgccattatttatgttcaagttcgtccaatggatatcttaaaacag
cttctattagaacaacgtggtcctgatacagaagccgttcgcgcatattttcagtcgcaa
tcattggaacaagcatgtgcgacttgtcttattttagccacgcttgaaagttctcaaaat
gctgagttggcagaatgggcaacaagagcattctttttatatggtagtcaacgaacgaca
agcattggacctgcaattgatgtacatggtactaactttactaatataaatacaggagat
atgcgcacatcgacaccaagagttccaaactatgatttaaggcttcaaggatttcgacct
catgcaccagttggacttaatacagacatttctctacaacaattttctgcaaaacataat
ggtttatatctgtatgtaggaagaatacttcgaccaatatggaacatgcgttgtattaaa
caagaaattataaacaacaaaactcagatctctagtacaatttcaacaagacaagttagc
tggattctaagtcttctgcaagcattaagatcgtttctcaataaaaatacccacattact
aagcaacatggtactactagaataactgatggatttgaaacaactatacctagtcattac
caagaaccaatagtcgaagaaaggaattctttagctgcattaaaaattttcattactcat
gcttgtgaagtgttagaactttggaaaattttatgtgaaaaccatttaaataatattgta
aattgtttatcaaaggaccaaattaatcaattttctacagctacatttcgagatttaatt
ttaattggacatgaaatttcttcattattgatcattcatcttatagatagttatcttgga
gataatgcatctgttgatgctgttagtcaaagattacgagaagtttgtccaaatttatat
agaagtgaggatgctgtttgttctaaggctaatgaaataattttgaaagcaaaaagttgt
acaaatccagaagagaaggaatgctatttgcaatctgctttaaagctttgcaaagaagtt
gctcccagactaaatttaagtgcagtatgccaacaatttatcgcttgtcaattttattcg
ggtgtactcgagttatgtctctgttgtgcagaaagagtagaccctaataatgctgcctta
cattattataaaaataatgaaccaatcgaagatcaagaaggaagatttgcttacataaaa
agattagagatttataaagaattcaccacgttattggatcatctttataatcaaagcatt
tctaatccattgacacctaccatacccagtaaacctggtcctccacaacaaaatggctca
actatgcctgttacaccagcaaaagaaatattgcatgacatcataactgacgcattacat
tccaagtgtgaaattctccacgcttcagtgtatgcttggatgatagaaagaaggcttcat
ggagaactcgttgctctagcagtaccttctttagaagcttatcttacccgagtcaatgcg
ccagacttgctgtggcaattttatgaaaaaaataaaaatcatgctgctgcagctaaaata
ttggatgctttagcaactaaagaatcaaatgtaacattatcacagagagttgaatattta
gctcgagcagtggtttgtatgagaagtgaccaggctggatacgctccataccttggcatt
tttttacgtgaattagaagacaaagtagaagttgctagaatacaacaacagatattagat
acaatttgtaaccaacatttaagcggtagactcagcgatgaagcatctagagcattaaag
ttttcgttacttgatataacaaagttgtaccaagaatatgcggaccctttacaattgtgg
gagtgcaaattatctataattcattgttctggtcatcaagatgcaatgttaatccaggaa
atttggactaatattataaataatgaattaaaagatgcgtcaacagcagaagataaaatg
actattttaatgagcaaaattatatctttgggacaggagtattcaggatcaccacactgt
tttccagttgacttcctagtaaaacagttagaaataaaagcatgtaagttaaatgtatca
aataatggaattatatctgggtttttacagttaggagtatcaatggaggatctcttagat
atttacaaaatgattggcaaagatactcgaacttggttcaacgagggaaatgattttcac
cttatcgaatcgactgcaaatttagttaattactttatatctcattcaaacattaccaat
actttcgttaaacgaaaaataataacgaagtgccaagacgtaatttcaaagtgtttaact
acattgtatagcaagcctcatggacaagaattaataacgaaacttagatcgattcaaaac
gttttaattcgtatgtaa
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