KEGG   Bombus vancouverensis nearcticus: 117160697
Entry
117160697         CDS       T07628                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117160697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bvan03041]
    117160697
Spliceosome [BR:bvan03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117160697
 Complex B
    117160697
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C DUF8489 RRM_7 DUF8400 RRM_9
Other DBs
NCBI-GeneID: 117160697
NCBI-ProteinID: XP_033197520
LinkDB
Position
Unknown
AA seq 432 aa
MGEDYNGDRDRQDREKDRDRDRDRDRRHRSRSRDRRKRSRSRSKDRRDRKRSSSPKKSRS
SRRRKPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARR
LYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQ
AMAFDGINFKGQSLKIRRPHDYQPMPGMTDNPSMNVPGTVPDSPHKIFIGGLPNYLNEEQ
VKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQR
ASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEEYEDILEDI
KEECNKYGVVRSVEIPRPIEGVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTS
YFDPDKYHRREF
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgggcgaagattataatggagatcgagaccgtcaggaccgtgagaaagatagggatagg
gatagagatcgtgataggagacatagatctcgtagtagagatcgtagaaaacgatctcgt
tcacgttctaaagatagaagagataggaaaaggagtagctctcctaaaaaaagtcgcagt
tctagaaggaggaagccatctctttattgggatgtaccaccacctggatttgaacatatt
actcctttgcagtataaagctatgcaagctgcaggacaaataccggcaaacattgtggca
gatacaccacaagcagctgtgccagttgttggtagtacaataactcgccaagcaaggaga
ctgtatgtaggaaacattccatttggtgtaactgaagaagaaatgatggagttctttaat
caacaaatgcatctatctggtcttgctcaagctgctggaaatccagtattagcatgtcag
atcaatttagataaaaactttgctttcttagagttccgttcgatagatgaaacaacacaa
gctatggcatttgatggtatcaacttcaaaggacagagtttgaaaataagaagaccacat
gattatcaaccaatgccaggaatgactgataatccaagtatgaacgtgccaggtacggtt
cccgattctcctcacaagatcttcattggtggtttacccaattacttgaatgaggaacag
gtgaaggagttactgatgagttttggacaactgagagcattcaatttagtaaaggattca
gctacaggtctatccaagggttatgcattctgcgagtacgttgacgtgtcaatgactgat
caagcaattgctggattaaatggaatgcagctgggagacaagaaactgattgttcaacga
gctagcgtaggcgccaagaaccctatgattggtgcacaagctccagttcaaattcaggtc
cctgggttatcaatggtgggcacaagtgggccagctactgaggttctttgcttgctaaat
atggtaacacctgaagaattaatggaagaggaagaatatgaagatatcttagaagacatc
aaggaagagtgtaataaatatggtgtagtccgatctgtggaaatacctagacctatagaa
ggtgttgatgtacctggatgtgggaaagtatttgtcgaatttaatagtgtgattgattgt
cagaaagcacagcagactcttacaggacgaaaattcaataatcgcgttgttgtaacatca
tattttgatcctgataagtatcaccgcagagaattttaa

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