Bombus vancouverensis nearcticus: 117160746
Help
Entry
117160746 CDS
T07628
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03022
Basal transcription factors
bvan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117160746
09124 Replication and repair
03420 Nucleotide excision repair
117160746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117160746
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117160746
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117160746
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117160746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
THF_DHG_CYH
Cys_box
Motif
Other DBs
NCBI-GeneID:
117160746
NCBI-ProteinID:
XP_033197608
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MSNEIETSLLIVVLDVNPVQRIIKQETRILTQCLDSTVVFANAHLMQSSNNQLAVIACHS
HGAKFLYPCEKPLEIRQIDGQYEKFTMIERTIRQQLQQVINEISMDKPLNGESLISGALT
MALCYVARLEREKVASEKIYSRILVITASNDSATQYMNYMNIFFTAQKMGIILDVCSLDQ
ELTLLQQGCDITGGNYLKVPQLNGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCH
QELIDIGYVCSICLSIFCKFSPICTTCHTVFKIPGPIPMKMKKKKKNVDIVH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaaatagaaacaagtttattaatagttgtattagacgtaaaccctgtgcaa
agaattataaaacaggaaacaaggatattgacgcaatgcttagactctactgttgttttt
gcgaatgctcatttaatgcaatcatctaataatcaacttgccgtgatagcatgtcatagt
catggagcaaaattcttatatccttgtgaaaaaccactagaaattagacaaattgacgga
caatatgaaaagtttaccatgattgaacgtaccatacggcaacaattgcaacaagttatc
aatgaaatttccatggataaaccattaaatggagaaagtcttatatccggagcattgact
atggcattgtgttatgttgcaaggttagaaagggagaaagttgctagtgaaaaaatatat
tccagaattcttgtgatcacagctagtaatgattcagcaacgcaatatatgaattacatg
aacatattcttcactgcccaaaaaatgggaataatattggatgtatgcagcttagatcaa
gaattgactttacttcaacaaggctgtgatattactggtgggaattatctaaaagtgccc
caacttaatggattattacagtatttattgtggatatttttaccagacccaaacgttaga
tcaaagttagtacttccaccacctgtgaaagtagattatagagcagcatgcttttgtcac
caagaactaattgatattggctatgtatgctccatatgtttatcaatattttgtaaattt
agtccaatatgcacaacgtgtcacacagtgttcaaaataccaggacctatacccatgaaa
atgaaaaaaaagaaaaagaatgtagatatagtacattaa
DBGET
integrated database retrieval system
