Bombus vancouverensis nearcticus: 117160751
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Entry
117160751 CDS
T07628
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvan03009
]
117160751
Enzymes [BR:
bvan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117160751
Ribosome biogenesis [BR:
bvan03009
]
Eukaryotic type
90S particles
Helicases
117160751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
HEM4
AAA_19
Motif
Other DBs
NCBI-GeneID:
117160751
NCBI-ProteinID:
XP_033197631
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MDAYELFRKLSTGVKFDKKRFQVDAERFQLVNKQSGNGVNDDKINIKAFDNINHSILCEK
RKYDEVEKETENINDLTLLDGMSIPQNKNKKCKVALTEEKRLKLEKEKINQFRNHHHISV
TGNCIPKPISEFIELSTTYNISQKLIYNITNCGYKCPTPIQMQAIPVMLQGRNVLACAPT
GSGKTAAFLLPIIHYLGGPEKKGFRAVILSPTRELAKQTYRECLRLSEGCNFRVHIISKV
NQALNKYGLKSSQKFDILITTPKRIIYLLNQDPPAISFSNVEWLIVDEVDKLFEDGTRCF
RDQLETISKSCTNENLHKAMFSATNTPIVTKWCRRNLKGLITVTVGHRNAATDLVEQELL
FVGAERGKLVALRNIIQKGVLPPVLVFVQSKERAQELFNELIYDGVNVDVIHADRTQTQR
DNVVRCFREGKIWVLICTELMARGIDFKGVNLVINYDFPPSAISYVHRIGRTGRAGHKGK
AITFFTVQDTTNLRSIATIMRESGCNVPDYMLAMKKHSKRERRKHECKAPIRESISTLPT
FKRVQTFKKRKVAVNDSKKKSELKSEENKDKKINTKHLKKEK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatatgaactatttcgaaaactttctactggtgtaaaatttgataagaagcgt
tttcaagttgatgcagaaagatttcagcttgtcaacaaacaatctggaaatggagttaat
gatgataaaataaacattaaagcctttgataacataaatcattcaatattatgtgagaaa
agaaaatatgatgaggtcgagaaagaaactgaaaatattaatgacttgacgttgcttgat
ggaatgtctattcctcaaaataaaaataaaaagtgtaaagtagccttaactgaagagaaa
cggttaaagttagaaaaagaaaagattaatcagtttcgcaatcatcatcacataagtgtc
acaggcaattgtatacctaaacctatctcagaatttattgaactatcaacaacttacaat
atatctcaaaaattaatatataatattacaaattgtggttataaatgtcctactccaatt
caaatgcaggctatacccgtcatgctgcaaggtagaaatgtactagcttgcgccccaact
ggatctggaaaaacagctgcatttctgttacctataattcattatttaggtggaccagag
aagaaaggatttagagctgttatattaagcccaacaagagaattagcaaaacaaacatat
agagaatgtttgcgtcttagcgaaggatgtaattttagagttcatattataagtaaagtg
aatcaagcattaaacaaatatggacttaaaagttcacagaaatttgatatattaatcact
acaccaaaaagaataatatacctgttgaatcaggatccaccagctatttcttttagcaat
gttgaatggttaattgtggatgaagtagataaactctttgaggatgggacaaggtgcttc
agagaccagttagaaacaatttcaaagtcatgtacaaatgaaaacttacataaagcaatg
tttagtgcaaccaatactcctatagtgaccaaatggtgtagacgtaatctgaaaggtctt
ataacagttactgttggacacaggaatgctgcaacagacttagtagaacaagaattgtta
tttgttggcgcagagagaggaaaacttgtggcacttagaaatattattcaaaagggagta
ttaccacctgtactagtatttgtgcaaagcaaggaaagagcacaagaattatttaacgaa
cttatatatgatggagtcaatgttgatgttattcacgctgatagaacacaaacgcagcga
gacaatgtcgttcgttgttttagagagggaaaaatatgggtattaatatgtacagaatta
atggcaagaggtattgatttcaaaggtgtaaatcttgttattaattacgatttcccacca
tctgctatttcttatgttcatagaattggtcgcactggtagagctggacataaaggaaaa
gcaattactttttttactgtacaagacactacaaatttgaggagtatagctactatcatg
cgtgaatctggttgtaatgttcctgattatatgttagccatgaaaaaacatagtaaaagg
gaaagacggaaacatgaatgcaaggctcctattagagaaagtatatcaactctacctaca
ttcaaacgcgtacaaacatttaaaaaaagaaaagttgctgtaaacgattccaaaaagaaa
tctgaactaaaaagtgaagagaataaagataaaaaaataaatacaaaacatttaaaaaaa
gagaaatag
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