Bombus vancouverensis nearcticus: 117160899
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Entry
117160899 CDS
T07628
Name
(RefSeq) nuclear pore complex protein DDB_G0274915-like isoform X1
KO
K18716
nucleoporin NUP42
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117160899
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117160899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
117160899
NCBI-ProteinID:
XP_033197868
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MVVCKYYRQGNCRFGQYCQFEHINTFGGNNKVDSYNEDEYIAVLVAKEMLNAERGRQWLL
SCFAPFKDKPCIPGMEDLSPEEVRWEMYQAQNNGMVDQAKLHFQQLCTDMKAKREAFKNP
TRETLTKLKEILGTGHKNARNDNTSGKSSSFAFATPQLGLPSSTPSSNVFGNKTFGTQSN
PFSGGFPPTSNTSIFGRTPTTSNSVFGSTPTFGSNLGVFGGGTSTNTVFGGITNTSTFNA
GQNTQTFGSSGSIFGGGASQPVFGQPSIFGTSNPVNNVFARHETSQAPISVFNSGATSSP
SLFSGTSSQSNASVFAGAKTSTANPFGGSSNLQTTNSIFGSTPSTGTFSSGIFSQSETPA
FGGAPVFGASTFGNNPSSIFGEKPAFGNSGSIFGGSSTTTPAFSSAQPTTAFGVTTSTSS
VNLFGNAQGTTPSMATSSASPFSATPSTTTSPFATAASQFETTSTAAFSKPTFGMATETA
GKTFATTATSSSTPFGTTNTGVTFGTPSTTTSPFTSTIFSDITSSPFSPTGVTSTATTTN
SFTPQQQQITSPFGTFAQNQTSSTATSTDGPFGKSTFGVTLTAIVIDDNIYSLDNQLTDD
EKNMYMAEKFIFGKIPLKPPTKDIR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttgtaaatactatcgacaaggaaattgtcgatttggacaatattgtcaattc
gaacatataaatacttttggaggtaataacaaagttgactcttacaatgaggatgaatat
attgcggtgttggttgcaaaagaaatgctcaatgcagaaagaggaagacaatggttacta
tcatgttttgcaccatttaaggacaaaccgtgtattcctggcatggaagatttgtctccg
gaagaagttcgatgggagatgtaccaagctcaaaataatgggatggtagatcaggcaaaa
ttacatttccaacaactgtgtacagatatgaaggcaaaaagagaagctttcaagaatcct
acccgcgaaacactaactaagcttaaagagattctaggtacaggacacaagaatgccagg
aatgataatacatctgggaaatcctctagttttgcttttgcaactcctcaacttggactt
ccaagcagtactccatcctccaatgtatttggaaacaagacatttggaactcagagcaat
ccattcagcggtggtttcccgcctaccagcaatacatcaatctttgggagaacacctaca
acttcaaattctgtatttggtagtacaccaacttttggcagtaatttaggagtgtttggt
ggtggtaccagcactaatactgtatttggtgggattacaaacacttctacatttaatgca
ggacaaaacacgcagacttttggatcgtctggctcgatttttggcggtggagcttcccaa
cccgttttcgggcagcctagcatatttggaaccagcaatccagtgaacaatgttttcgcc
aggcatgaaacgtcccaggcgcccatatcagtattcaatagcggagcaacatcttctccc
tctttattcagtggaacttcttctcaatctaacgcttctgtatttgccggagctaaaact
tctactgctaatccgtttggcggctcttcaaatttacagacaactaactctatcttcgga
tcgactccgtccaccggaaccttcagttcaggcatattctcgcagtctgaaacacctgca
tttgggggagcaccagtatttggtgcttcaacttttggaaacaatcccagttcgatattt
ggcgagaaaccggcatttggaaattctggtagtattttcggcgggtccagtaccacaaca
cctgccttcagttcggcacagcctacaaccgcttttggcgttaccacttctacatcttcc
gtaaatctatttggaaatgctcagggtaccacaccctctatggccacttccagtgcttcg
ccatttagcgcaacaccttcaacgactacgagtcctttcgctaccgcagcctcgcaattt
gaaaccaccagtacggcagccttctcgaagcctacgtttgggatggctacggaaactgcg
ggtaaaacttttgctactacagctacttcctctagcacaccgtttggtactacaaatacc
ggagttacttttggtacacctagtaccaccacttctcctttcacatcgacgatatttagc
gatataacgagctcaccgtttagtcctacgggcgttacatctacagctacaaccacaaat
tcgtttacaccccagcaacaacaaattacttctccatttggtacttttgcacaaaatcaa
acttctagtactgctacgtctacggacggaccgtttggaaaatcgacattcggagtaacg
ctgacggcaatcgttattgacgacaatatttattcgttagacaatcaactaacagacgac
gagaagaacatgtacatggcggagaaatttatttttggaaagattccgctgaagccgcct
accaaagacattagataa
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