Bombus vancouverensis nearcticus: 117160945
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Entry
117160945 CDS
T07628
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03018
RNA degradation
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117160945
09123 Folding, sorting and degradation
03018 RNA degradation
117160945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117160945
03041 Spliceosome [BR:
bvan03041
]
117160945
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117160945
mRNA degradation factors
5'-3' decay
Lsm complex
117160945
Spliceosome [BR:
bvan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117160945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
117160945
NCBI-ProteinID:
XP_033197960
LinkDB
All DBs
Position
Unknown
AA seq
113 aa
AA seq
DB search
MSAAKQQQNAHGEPKERKKKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLD
NTTEYLRDPDDPYKLNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggcgaaacagcaacaaaatgctcacggagaaccgaaagaaagaaaaaagaaa
gaaagtattcttgatctttcaaaatacttagagaaaaatattagagtgaagttcgccggc
ggaagagaagctgcagggattttgaaaggctatgatcctctcctcaatttggtactggat
aataccacagaatacctgagagatcccgatgatccatacaaattaaatcaggatactcgt
atgttaggtttagttgtatgtaggggtacatctgttgtacttatttgtccagtagatgga
atggaatctatccaaaatccttttatacaacaagaaggttaa
DBGET
integrated database retrieval system
