Entry |
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Name |
(RefSeq) probable ATP-dependent RNA helicase kurz isoform X1
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KO |
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Organism |
bvan Bombus vancouverensis nearcticus
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Brite |
KEGG Orthology (KO) [BR:bvan00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:bvan03009]
117161119
Enzymes [BR:bvan01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117161119
Ribosome biogenesis [BR:bvan03009]
Eukaryotic type
90S particles
Helicases
117161119
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1195 aa
MGRKKHNWKARNIAEVEIDNSATKKIPIDIKYREDNYDNCNALVLPNEKRRTKSKVKKVT
TTRLLSKKRRKQLEKVVEKKKKKLRRTELLEELGKVQAPQEELKQYVSLTSVQTKGLKRH
FREMELPVKEHMIKSNNENEDNMSEVPVNAIKGSKKRRMAILKEQKVQDAVSDPNVIGFD
EPSNSESESNSEDNEDREEKDAAETSEDNENIPSKEDNILENNITKSTVGEQEKSIENQT
TISKELLKPQQPIERTPATFVVLERKPEIQAARLKLPVVAEEQAIIEAINENPVVIITGE
TGSGKTTQVPQFLYEAGYAQEKVIGITEPRRVAAISMSKRVAEEMNLTEEEVSYLIRFEG
NVTSETKVKFMTDGVLLKEIQSDFLLTKYSIIILDEAHERSVYTDILIGLLSRIVPLRNK
RKNPLKLVIMSATLRVEEFVENSKLFKTKPPVLTVESRQFPVTIHFNKRTSINYVSDALK
KAIKIHTRLPDGGILIFLTGQREVNYVVCKLRRAFSMKNKKEIANKMKEPQKTNDSSKKE
DDIKNNSDNEDKSDNSDHDTDDDFRCKEAIRYNKLRQKKKVQLPNINLDDYSVIPTDDTH
EDLIGAEDDEEIQLDEDEDEDDDVIDLKACADAQPLWVLPLYSLLQSDKQARVFEPPPEG
HRLCVVSTNVAETSLTIPNIKYVVDCGRCKTRMYDKVTGVSTYRICYTSKASANQRAGRA
GRTGPGHCYRLYSSAVFNDQFEQFSQSEIQRKPVDDLLLQMKVMNIDKVVNFPFPTPPDT
VQLQIAEKRLMILGALQQQTSGKEGSYSAKVTPLGRSIAAFPVAPRYGKMLSLSHQYDLL
QYTVCMVAALSVQEVLMEAFNMDNDSRNKWLQMRRFWAGTGNSLLLGDPMVLIRAVGSAE
YAGTKGRLLPFCDEHGLRHKAIVEIRKLRQQLTNEINLNIEDLNLTINPQMKPPADIEAK
LLRQIVLAGMADQVARKVMPDEVNEDQDKAKWKYAYKTTDMEDPVFIHSSCVLRKICPEW
VVYQEIYETNKMYMRGVTSIEPEWLPKFAPSLCQLGEPLTDPPPRYDPETGKVMCSMAGT
FGRAGWKLPVMDVEYPLSVDGVKWFACFLLEGKVCPKLKQFVPSLLSTPQSINKTWAKLI
PRTQEMTQLLLSRGIMSRGQLLEAWKVDKNFLLSAYQKWLPESAHGHVMLIWPPV |
NT seq |
3588 nt +upstreamnt +downstreamnt
atgggaaggaaaaagcataattggaaggcgagaaatatcgcagaagttgaaattgacaat
tctgcgactaaaaagattcctatagatataaaatatcgtgaagataattacgataactgt
aacgcgctagtgctcccaaatgaaaaaagaagaacaaagagcaaagttaaaaaagtcact
actacacggttattatccaagaaacgtagaaaacaattagagaaagttgtagaaaagaag
aagaaaaagttacgtaggactgaacttttagaggaattggggaaagttcaagcaccgcag
gaagaactgaagcaatatgtatctttgaccagtgtacaaactaaaggactgaaacgtcac
tttagagaaatggaattacctgttaaggaacatatgatcaaatcaaataatgaaaatgag
gacaacatgtcagaagtacctgtaaatgctattaaaggtagcaagaagagaaggatggca
attttgaaagaacaaaaagtacaggatgctgtttcagatccaaacgtcattggatttgat
gaacctagcaatagtgaatctgaatctaattctgaggataatgaagacagagaggagaag
gatgcagcagaaacttcagaagataatgaaaatattccaagcaaagaagataatattcta
gagaataatataacaaaaagtactgtgggagaacaggaaaagtcaattgaaaaccaaacc
actataagtaaagaattgttaaaaccacagcagccaatagaaagaacacctgccacgttt
gtagtactggaaaggaaaccggaaatccaagcagctagattaaagttgccagtggtagca
gaagaacaagctataatagaagcaattaatgaaaatcctgtcgtaataatcactggcgaa
acgggaagtggtaaaacaactcaggtaccccaatttctctatgaagctggctatgctcaa
gaaaaggtaattggaataacagaacctagaagagtagcagctatatctatgagcaaacgt
gttgccgaagagatgaatctcactgaagaagaagtttcttatttgattcgttttgagggg
aatgttacatcagagacaaaagtcaaatttatgaccgatggcgtattattaaaagaaata
cagagtgattttttactgacgaaatattcgataatcatcctcgatgaagcgcacgaacgt
agtgtgtatactgatattctgataggcttgctatcacgaattgtaccacttcgaaataaa
aggaagaatcctctaaagctcgtaattatgtcagccactttacgcgtagaggaatttgta
gaaaatagtaaattgttcaaaacgaaaccgcctgtattaacagtggaatcgagacagttt
cctgttacgatacattttaataaaaggacaagcatcaattacgtttctgatgctctaaag
aaagccataaaaatacatactcgccttcccgatggtggaatcttaatatttttaacaggg
caacgggaagtaaattatgtagtatgtaaattacgcagagctttttccatgaagaataaa
aaggaaattgcaaacaagatgaaagaaccacagaagactaatgattcttcaaagaaagag
gatgatataaaaaacaacagtgataatgaggacaagagtgacaatagtgatcacgatact
gatgatgattttcgttgcaaggaagctattcgttacaacaaattacgacaaaagaagaaa
gttcaattaccaaatattaatctggatgattactctgtgattcctaccgatgacactcac
gaagatttaattggcgcggaagatgacgaagaaatacaattagacgaggatgaagatgaa
gatgacgacgtaattgacttaaaagcttgtgcagatgcacaaccattgtgggttttacca
ttatattctctgcttcagagtgacaaacaagcaagggtattcgagccacccccagaagga
caccgtttatgtgtagtatcaacaaacgtagcagaaacttctttaactatacctaacata
aagtatgtagtagactgtggacgttgtaaaacgagaatgtacgataaagtaactggagta
agcacatacagaatctgctatactagcaaggcatccgctaatcaacgagcagggagagct
ggtagaactggtcctggacattgttacaggttgtactcttcagcagtgttcaatgatcag
tttgaacagtttagtcaatcagagattcaaaggaaacctgtggatgatttactgttacag
atgaaagtcatgaatattgataaggttgttaattttccattcccaactccaccggatact
gtacaattacaaattgctgaaaaaagattgatgatacttggagctttacaacaacaaact
tccggcaaagaaggttcctatagtgccaaagtcacgccactcggtcgcagtatcgctgca
tttccagttgctccccgttatggaaagatgttgtctctctctcatcaatatgaccttctg
cagtatacagtgtgtatggtggctgcactttctgttcaagaagtattgatggaagcattc
aatatggacaacgattctcgaaataaatggttgcaaatgaggcgcttctgggctggcacc
ggaaatagcttacttcttggcgatccgatggtcttaattagggctgtgggaagtgcagaa
tatgctggaactaaaggaagattacttcccttttgcgatgagcatggtttgcgacacaaa
gcaattgtagaaattcggaagctccgacagcagctaacgaatgaaatcaatttgaatatt
gaggatttgaatctcactattaacccacagatgaaacctccagccgatatagaagccaaa
ttactcaggcaaatagtccttgcaggaatggctgatcaagttgcaaggaaagtgatgcca
gatgaagttaatgaagatcaagacaaggctaaatggaaatatgcttacaaaaccacagat
atggaggatccagtatttatacattcctcatgtgttcttcgaaaaatctgccctgaatgg
gtagtttatcaagaaatatacgagacgaataaaatgtacatgcgcggtgttacaagtata
gaacccgaatggctacctaaatttgctccatctctatgtcagcttggagaacctttaact
gatccaccaccaaggtatgatccagaaactgggaaggtaatgtgcagtatggcaggaaca
tttggaagagcaggttggaagttaccagtaatggatgtggagtacccactatctgtagat
ggagttaaatggtttgcatgtttccttttagaaggaaaagtgtgtccaaaattgaaacaa
ttcgttccttcattgttatcgactccccagagtattaacaagacatgggctaaattaata
ccacgaacacaggaaatgacgcagttattactgtcccgcggaattatgtcaagaggacaa
ttactagaagcttggaaagtagataaaaatttccttctgtctgcttatcagaaatggtta
ccagaatcagctcatggacacgttatgctcatttggccacctgtatga |