KEGG   Bombus vancouverensis nearcticus: 117161144
Entry
117161144         CDS       T07628                                 
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
bvan  Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bvan03009]
    117161144
Ribosome biogenesis [BR:bvan03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    117161144
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 Ge1_WD40 Beta-prop_NWD2_C WD40_RFWD3 WDR90_beta-prop_4th WD40_alt VPS8_N Beta-prop_RIG_2nd Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 117161144
NCBI-ProteinID: XP_033198337
LinkDB
Position
Unknown
AA seq 428 aa
MSRIADTREVILTSDSSGEHWSAAVWDHRTGSILSTYKNAGALSHRTLQLLSDSYIVGAD
LTKPRIHVWPLNSHSPVSNLRLTTPGKVTALNCTPNGAYMVAAISEKLFLWQLCNGRLLK
NLSQHYQTVTCLTFSKDGSIFASGAEDGLIFVWSLYRVLNEEHPTPLHAFSHHSLPVKDL
QFGHAGARGRLCSVSLDRTCNIYDPGSGLLLLTLVFDVPLTSVSMNARESDLFVGCTNGD
IYGFNLHEPPRGIEHHVQVRNDGNSDGVIVFQGHKSSVVSLSISIDCRYLVSGSTSGEVH
VWDIASRQILRTIDHKGPITAAFFAKNYDNFRVTNLKPRLQLCNLHRISDDSGKESFIEV
ISRDRNTTDILDFDLYTEKNIDMAGSEDVTSKKFSEMKDEIDKLKKINAAMYQYSVKHIL
NKSNIDLT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgtcgcgaattgccgacacgagagaagtgattttaactagtgacagtagcggtgaacat
tggagtgcagctgtgtgggatcaccgaactggttcaattttatcgacttataaaaatgct
ggtgctctcagtcatagaactcttcaacttttaagcgacagttatatagtgggtgcggat
ttaacgaaaccgcgtatacatgtttggccattgaacagtcattctcccgtatctaacctg
agactgacaacaccgggaaaggttactgctctgaattgcacgcccaatggcgcctacatg
gtcgcggccatttccgaaaaactattcctctggcaattgtgcaacgggcgtttgttaaag
aatttatcgcaacattatcagacagtgacctgtttgacgttcagcaaagacggttccatt
ttcgccagtggcgccgaggacggattaattttcgtgtggtcgttgtatcgtgtattgaac
gaggaacatcctacgccattgcacgcattctctcatcactctttgccagtgaaggaccta
caatttggacatgctggcgcgcgaggaagactgtgctccgtatctctcgatcgaacatgc
aacatttacgacccaggctccggattgctattgctcactcttgtgttcgacgtgccactc
acttccgtttccatgaacgcacgcgaaagtgatttattcgtgggctgcacaaacggtgac
atatatggattcaatttgcacgagccgccacgtggaatagagcatcatgtgcaggtacgg
aatgacggaaattcggatggagtgatagttttccaggggcacaaatcgagcgtagtatca
ttatcgatatcgatcgattgtcgatacctggtgtcgggctcgaccagcggcgaagttcac
gtctgggacatagcgagtcgtcaaattcttcgtacgatcgatcacaagggaccaatcacc
gctgcattcttcgcgaaaaactacgacaatttccgggtcaccaaccttaagccgcgttta
caactatgtaatttacataggatatcggacgatagcggaaaggaaagcttcatcgaagtg
atttcaagggatcgaaatacaacagacattttagattttgatttgtacacagaaaaaaat
atcgatatggccggatcagaggacgtaacctcgaaaaagttttccgagatgaaggacgag
atcgataaactgaagaaaatcaatgctgctatgtatcagtacagtgtaaaacatattttg
aataagtcgaatatagatttaacttag

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