Bombus vancouverensis nearcticus: 117161405
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Entry
117161405 CDS
T07628
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03030
DNA replication
bvan03410
Base excision repair
bvan03420
Nucleotide excision repair
bvan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117161405
03410 Base excision repair
117161405
03420 Nucleotide excision repair
117161405
03430 Mismatch repair
117161405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvan03032
]
117161405
03036 Chromosome and associated proteins [BR:
bvan03036
]
117161405
03400 DNA repair and recombination proteins [BR:
bvan03400
]
117161405
DNA replication proteins [BR:
bvan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117161405
DNA Replication Termination Factors
ELG1-RFC complex
117161405
Chromosome and associated proteins [BR:
bvan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117161405
DNA repair and recombination proteins [BR:
bvan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117161405
Check point factors
HRAD17(Rad24)-RFC complex
117161405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
AAA_16
AAA_22
Mg_chelatase
AAA_11
Rad17
AAA_30
AAA_24
bpMoxR
AAA_assoc_2
DUF815
ResIII
SLFN-g3_helicase
MCM
AAA_5
AAA_19
RuvB_N
DNAX_ATPase_lid
AAA_7
AAA_28
AAA_2
Motif
Other DBs
NCBI-GeneID:
117161405
NCBI-ProteinID:
XP_033198806
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MQAFLKTGKLGPGEPKKASTSRSKEEHSGSATPWVEKYRPRTVEDVVEQAEVVEVLRQCL
TGGDFPNLLFYGPPGTGKTSTILAAARQLFGSLYKERLLELNASDERGIQVVRDKIKSFA
QLTAGGMRDDGKRCPPFKIIILDEADSMTNAAQAALRRTMEKESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLGEDKIVERLEYICKEEDLKATKPVLLKIVEASGGDLRRAITCLQS
ITRLKGKGIDITVDDIIEIIGIVPDKWLDDLMNVCKTKDYSKAEEFIDQFMLEAYATSQV
IEQLSERIIYSNELTDKQKTLIADRLGECNYRLLDGGSEYIQLINLCCGIIKAYELV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctaaaaactggcaaattagggcctggtgagcctaaaaaagcttcaact
tcacgttcgaaggaagaacatagtggttctgcaacgccatgggttgagaaataccgacca
agaactgtagaagacgttgttgaacaagcagaagtagtagaggtattgcgacaatgttta
acaggtggagattttccaaatctattattttatggcccacctggtactggtaaaacaagt
actatattagccgcggctagacaattatttggtagcctttacaaagaaagactattggaa
ttaaatgcttctgatgaaagaggtatccaagttgtaagagataaaatcaaatcttttgca
caacttacagcaggtggtatgagagatgatgggaaaagatgtccaccttttaaaattatt
atcttagacgaggcagatagtatgactaatgctgcacaagctgcacttcgtcgtactatg
gaaaaagaatctcatagtacccggttttgtttaatttgtaactatgtatcgagaatcata
gaacctttgacttctcgttgtacaaaattcagatttaaaccattgggagaagataaaatt
gttgaaagattagaatatatatgtaaagaggaggacttgaaggcaacgaagcctgtccta
ctaaaaattgtcgaagcctcgggtggagatttacgacgcgctataacgtgtttgcagtcc
attacaaggttgaaaggcaaaggcatcgatattactgttgatgatatcattgaaattatt
gggattgtacctgataaatggttggatgatttaatgaatgtatgcaagacaaaagattat
agcaaggcagaggaatttattgatcaatttatgttagaagcatatgctacatctcaagtt
attgagcagctcagtgaaagaattatatattccaatgaattaacagataaacagaaaact
ctcattgcagatagactgggggaatgtaattataggttgctagatggtggaagtgaatat
atacaacttataaatctttgttgcggtattataaaagcttatgaattagtataa
DBGET
integrated database retrieval system