KEGG   Bombus vancouverensis nearcticus: 117161405
Entry
117161405         CDS       T07628                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03030  DNA replication
bvan03410  Base excision repair
bvan03420  Nucleotide excision repair
bvan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117161405
   03410 Base excision repair
    117161405
   03420 Nucleotide excision repair
    117161405
   03430 Mismatch repair
    117161405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bvan03032]
    117161405
   03036 Chromosome and associated proteins [BR:bvan03036]
    117161405
   03400 DNA repair and recombination proteins [BR:bvan03400]
    117161405
DNA replication proteins [BR:bvan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117161405
  DNA Replication Termination Factors
   ELG1-RFC complex
    117161405
Chromosome and associated proteins [BR:bvan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117161405
DNA repair and recombination proteins [BR:bvan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117161405
  Check point factors
   HRAD17(Rad24)-RFC complex
    117161405
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_24 AAA_22 Mg_chelatase AAA_11 Rad17 AAA_30 bpMoxR AAA_assoc_2 DUF815 AAA_14 ResIII MCM AAA_5 AAA_19 SLFN-g3_helicase RuvB_N DNAX_ATPase_lid AAA_7 AAA_28 AAA_2 EAL
Other DBs
NCBI-GeneID: 117161405
NCBI-ProteinID: XP_033198806
LinkDB
Position
Unknown
AA seq 357 aa
MQAFLKTGKLGPGEPKKASTSRSKEEHSGSATPWVEKYRPRTVEDVVEQAEVVEVLRQCL
TGGDFPNLLFYGPPGTGKTSTILAAARQLFGSLYKERLLELNASDERGIQVVRDKIKSFA
QLTAGGMRDDGKRCPPFKIIILDEADSMTNAAQAALRRTMEKESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLGEDKIVERLEYICKEEDLKATKPVLLKIVEASGGDLRRAITCLQS
ITRLKGKGIDITVDDIIEIIGIVPDKWLDDLMNVCKTKDYSKAEEFIDQFMLEAYATSQV
IEQLSERIIYSNELTDKQKTLIADRLGECNYRLLDGGSEYIQLINLCCGIIKAYELV
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaggcatttctaaaaactggcaaattagggcctggtgagcctaaaaaagcttcaact
tcacgttcgaaggaagaacatagtggttctgcaacgccatgggttgagaaataccgacca
agaactgtagaagacgttgttgaacaagcagaagtagtagaggtattgcgacaatgttta
acaggtggagattttccaaatctattattttatggcccacctggtactggtaaaacaagt
actatattagccgcggctagacaattatttggtagcctttacaaagaaagactattggaa
ttaaatgcttctgatgaaagaggtatccaagttgtaagagataaaatcaaatcttttgca
caacttacagcaggtggtatgagagatgatgggaaaagatgtccaccttttaaaattatt
atcttagacgaggcagatagtatgactaatgctgcacaagctgcacttcgtcgtactatg
gaaaaagaatctcatagtacccggttttgtttaatttgtaactatgtatcgagaatcata
gaacctttgacttctcgttgtacaaaattcagatttaaaccattgggagaagataaaatt
gttgaaagattagaatatatatgtaaagaggaggacttgaaggcaacgaagcctgtccta
ctaaaaattgtcgaagcctcgggtggagatttacgacgcgctataacgtgtttgcagtcc
attacaaggttgaaaggcaaaggcatcgatattactgttgatgatatcattgaaattatt
gggattgtacctgataaatggttggatgatttaatgaatgtatgcaagacaaaagattat
agcaaggcagaggaatttattgatcaatttatgttagaagcatatgctacatctcaagtt
attgagcagctcagtgaaagaattatatattccaatgaattaacagataaacagaaaact
ctcattgcagatagactgggggaatgtaattataggttgctagatggtggaagtgaatat
atacaacttataaatctttgttgcggtattataaaagcttatgaattagtataa

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