Bombus vancouverensis nearcticus: 117161500
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Entry
117161500 CDS
T07628
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03013
Nucleocytoplasmic transport
bvan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117161500
09122 Translation
03013 Nucleocytoplasmic transport
117161500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117161500
03041 Spliceosome [BR:
bvan03041
]
117161500
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117161500
Spliceosome [BR:
bvan03041
]
Complex C
Other components
EJC/TREX
117161500
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117161500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
117161500
NCBI-ProteinID:
XP_033198969
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
MAGKVWNTDIWKAWDKHGKNDFLKLIKHKFKEGNTAEWRRGLYELISNGIRGNIKKDNVV
QTLGELTNIDGAIPSAIVDIFTLIDAEAHNEERNNFYYLVKESEKFLTDRILKERLEIDT
LQDVGTLKNKNFQIKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQERPESEVASIL
EIVKSLIGYFNLDPNRVLDILLETFENRPQDDALFIPLIRSYMSDQQVLCEVLGFKYCST
VNATPFSLQKVTALMLQHGVIKLDDILPWLVPDDKTIIKEHEQAMKQAKDYVRKLSVIST
KDKEDVPEEKETPQDKYTSNQKFGLCEALLETGAWEVAQNLFNRLPEHSFTDQRPIALAL
CKMIQSLIEPVYRKNCIISPKLQGRRVPQLKSSLAPKLIESLEEIHDQLLPMLIVLGPNL
HHDPVLMYKIMRLCHAAIKQCPLDSNKQPIDKNNNLYYDVLTILDVALLPSLSFMDCNCC
VAEELWNILKYYPYQNRYCLYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETIKP
VGRSIGKLTHSSPGVLFDYILIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAGA
DRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEIV
QKMAGIEAAEEMTSDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKEALAEHDLAVALC
LLMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHSM
LQDNHIHSDVAFFLARPMFAHAINIKYDALRKADPNYKKMSTAMKQAKYAEAAQAVMAPV
AQSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREINKLKQLAAQSADSKDVN
VSKGKKEQERYTTLIEKLQDERRKQEEHVEKVFAYLRQEKDTWFLSRSAKSAKNETITQF
LQLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEAN
RYGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVCH
KWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERGQ
RQDLHVLATSYSGQLKAKTPNMIREADFHHVGDKTGKAQDTSNSDNSDKAGDGISSKEIT
NGDSRIEKESKDQREKRSASNQLHHDSSEKIRKKEESKESSEGKDKHLKKDEIKEEDTID
KKDRKYYKEEHYYGSGVDNLDRDLSSVSNSSASSGPTQDGSDRDAKRRKVENVQKEGRRA
EGSLDKKERSSKGKIRDEQKELRREKKFARKRDRTDESAVTTEQKRRKDDEKAKGTHQNG
DIPEHREKHHYNKEKSPYTKERTHEREGRESRDKHRRSSDPKRR
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaagtgtggaatacagatatatggaaagcatgggataaacatggaaaaaat
gatttcctcaagttaatcaagcacaaatttaaggaaggcaacactgcagaatggagaaga
ggattatacgaattaatttcaaatggaatccgtgggaacataaaaaaggacaatgttgtt
cagacattaggtgaactaacgaatattgatggagcaataccatctgcaatagtggatata
tttacactgatagatgcggaagcacataatgaagaaaggaataatttttattatcttgta
aaagaatcagaaaagtttctcacagatagaatattgaaggaacgtttagaaattgataca
ttgcaagatgtaggaactttaaaaaacaagaattttcaaatcaaatttattaaagtgaaa
acaaaattgtattataaacaacggaaatttaatttatttcgggaggaaagcgaaggatat
tctaaacttatagtggaattgaatcaggaacgtccagaaagtgaagtagcatcaatattg
gaaattgttaagtctcttatcggatattttaatcttgaccctaatagggtactcgatatt
ttattagaaacttttgagaatcgacctcaagatgatgcgctttttatccctttaattcgg
tcatatatgagtgaccaacaggtactctgcgaagttttaggatttaaatattgttcaacc
gtcaatgctactccattttcattgcaaaaagtcactgcactcatgttacaacatggtgtt
attaaattagatgatatattgccttggttggtgccagatgataaaactattattaaagaa
cacgaacaggcaatgaaacaggcgaaagattatgttcgcaaattaagcgtaatctctacg
aaagacaaagaggacgtaccagaggagaaagaaactccacaggataaatacacaagtaat
cagaagttcgggttatgcgaagcacttttagagacaggagcttgggaagtagcacaaaat
ttattcaatcgattacccgaacacagtttcaccgatcaacgtccaattgcattagcgctg
tgcaaaatgattcaatctcttatcgaacccgtttatcgcaaaaattgtataatatcgcca
aaattacaaggtaggagagttccacaattaaagagctctcttgctccgaaactaatcgag
agtctcgaggagatccacgatcaattattaccaatgcttatagtccttggtcccaatcta
catcatgatcctgttctaatgtacaaaatcatgcgattgtgtcatgcggccataaaacag
tgtccgttagattccaataagcaaccaattgataaaaataacaatttgtattacgacgtg
ttgactattctcgatgtggcgttactgccatcgttatcgtttatggactgtaactgttgc
gttgctgaagaattgtggaatatcttaaaatactatccatatcaaaatcgatattgtttg
tacgctcgatggaaaaacgatacacctttgcaacatgctgctcttttaagaaaacgagca
gatgcgcaaaagaaaattaagtctatcatgaaaagagtgagtaaggaaaccataaagccc
gtagggaggtcaataggcaaacttacacattcttcgcccggtgtattgttcgattatatt
cttatacaaatccaattgtatgataatcttataggacctgttgtagattccctaaaatat
ttgactaacatttcttatgatgtacttggttactgtcttgtggaagctttagctggtgct
gacagagataggtttaaacatgatggcaccagcatatctctttggctccaatcccttgct
tcgttttgtggagccatatttaagaagtataatattgaacttactggtttgctgcagtat
gtagctaatcaacttaaagcacaaaaaagcctagatttattaatattgaaagaaatagta
caaaagatggcgggtatcgaagccgctgaggagatgacttcggatcagttagatgccatg
gcaggtggagacttattaaaaaatgaagctggctacttcagtcaagtacgcaatacaaag
aaatcatcgcaacgtttaaaagaagctctagctgaacatgatcttgctgtagcactatgt
cttttaatggcacagcaaaaacactgtgttgtgtatagggaaacagataaatctcatctt
aaactcgtgggaaaactatatgatcagtgtcaagatacattagttcaatttggtactttc
ttgggatccactatgacagtagatgaatatgtagaaagacttccctccatacattctatg
ctccaggacaatcatatacattctgatgtcgcattttttcttgcaagaccaatgtttgca
catgccattaatattaagtatgatgccctacgtaaagctgatccaaattacaaaaagatg
tcaactgctatgaagcaagcaaagtacgcagaagctgcacaagcagttatggcacctgtt
gctcagtcagtcagacctttacatccattgaaagtatgggaggatatctcgccacagttc
ctggtgacattttggtccttatctatgtacgatttgtatgttcctgtggagagttaccag
agagaaattaacaaattaaagcaactcgcggcacaaagcgccgattccaaagatgtgaat
gttagcaagggaaagaaagagcaagaaagatatacaactctaattgagaaactacaagat
gaaaggagaaaacaggaagagcacgttgaaaaagtatttgcatatctaagacaagagaaa
gatacatggtttttatctcgaagcgcaaaatcagcgaaaaatgaaacgataacgcaattt
ctacaactgtgtctgtttcctcgatgtacatttacaaccgtggatgccatgtattgcgcc
aaattcgttcatactatacattctttaaagactgcgaatttttcaacccttctttgctat
gacagacttttctgtgatataacatattcagttacctcatgtaccgaaaacgaagcgaat
cgttatggaagatttttatgcgccatgctggaaacggtaatgaggtggcactctgagaaa
gccatattcgataaggaatgtagcaattatccgggatttgtaacaaaatttcgagttagc
aatcaattctctgaagccaatgatatggtaggatttgaaaattacagacacgtgtgtcac
aaatggcattacaaaattacaaaggcgattgtagtttgtttggattctaaggactacgta
caaataagaaattccttgataatattaataaaaatattaccacatttccctgttctggca
aaattatctcaaattcttgaacgtaaagtagaaaaagtgagagaggaggaacgtggacaa
cgccaagatttgcacgtactagcaacgtcgtacagtggccaattaaaagccaaaactcca
aacatgattcgcgaagcagattttcatcacgtaggggataagactgggaaagcacaagat
acttcaaatagtgataattcggataaagctggcgatggaatatcgagtaaagaaattaca
aacggcgactctaggatagagaaagagagtaaggatcaacgagaaaaacgaagtgcatcg
aatcaattgcatcatgacagctcggaaaaaattagaaaaaaagaagaaagcaaggaaagt
tctgaaggaaaagataaacatttaaaaaaggacgagattaaggaagaggacacaatagat
aaaaaagaccgaaaatactataaagaggaacactattacggcagtggtgtagataattta
gaccgtgacctttctagtgtatcaaatagtagtgctagttctggacccacacaagatgga
tcagatagagatgccaaaagaagaaaagttgagaatgtacaaaaggagggtagacgtgct
gagggaagtcttgacaaaaaagagcgctcgagtaaaggcaaaataagggacgaacagaaa
gaattgcgcagagaaaagaaatttgcacgaaaaagggataggacagacgaatcagcagtc
acgaccgaacagaaaagaagaaaagatgatgagaaagcaaaaggaacacatcaaaatggt
gatatcccggagcatagggaaaaacatcattataacaaggaaaagtcaccctacacaaag
gaacgtactcatgaacgggagggccgcgaaagccgggacaaacataggagaagttcggat
cccaaacgaagatga
DBGET
integrated database retrieval system
