Bombus vancouverensis nearcticus: 117162036
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Entry
117162036 CDS
T07628
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bvan03000
]
117162036
Transcription factors [BR:
bvan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117162036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
CSRNP_N
Motif
Other DBs
NCBI-GeneID:
117162036
NCBI-ProteinID:
XP_033199740
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MLTMESDLKGGSLHGQMPPHPHQGVSPMGHHTGVSPYGTLGSIVHSPALSGSPPSTGGLT
LGLQHHHQTPQHHYTSMQAAQQQSMHSLAQQNAAQQQQHHPHQQQQQQQQQQQQPPPPQH
HQAPNNNNNTSKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL
SETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFPIGSGVAGVGGMLGVDQ
RQVGATGGPQQAQLSRDVYQMPNGYMPNGYMMHDPTAAYQQHVAYGGHMGGAAAAAAASA
AGYPRYDMGHHMGGGSPSPINSYMNGYGGYGSGSVPGGSPSPYHQAQPGSQISSHSPSGS
SIKSEPTSPASGGIHTPPTAASSTGAAGGQVVKREYMGQQQNQQAQGDLRQMISMYLPQG
VEQGVVQHGAGVYSPGPSPDPLAQHHPSIPPLGHMAESDRKMLNPDTGCYSESVRAWYRY
MWKRYGDQHPNICSWDSYYSEK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgatggagtctgacctaaaaggcggcagcctacacggtcaaatgccacctcat
ccgcatcaaggtgtttcgccaatgggacaccataccggtgtatcaccgtacggcaccctc
ggctcgatagttcatagcccagcattatcaggaagtcctccgagtaccggaggtttaact
ttaggtttacaacatcatcatcaaacgcctcaacatcattacacatccatgcaggcggca
cagcaacaaagcatgcattcgctggcgcaacaaaacgctgcacaacaacagcaacatcac
ccgcaccagcagcaacagcagcagcaacagcagcagcagcaaccaccaccgcctcaacat
catcaggcaccgaacaacaataacaataccagtaagaacaacaacatcgaccgcgtgaaa
aggccgatgaacgcgtttatggtgtggtcccgtggccaacggcgtaagatggctcaagaa
aatccaaagatgcacaactcagaaatttcgaaacgattgggcgcggagtggaaacttctc
agtgaaaccgaaaaacgcccattcatcgatgaagcgaaacgattacgcgcggtgcatatg
aaagaacatcccgactacaaatatagaccacgccgtaaaacaaagaccttgttgaagaaa
gacaaattcccaattggaagcggagtagccggcgtcggaggtatgctgggcgtagatcag
cggcaagtcggtgctaccggtgggccgcaacaagctcaattatcccgtgatgtgtatcaa
atgccaaacggttatatgccgaacggatatatgatgcacgatcccacagccgcttatcag
cagcacgttgcgtatggcggtcacatgggaggcgcagcagccgctgcagctgcttctgct
gctgggtatcccaggtacgatatgggccatcacatgggcggtggcagtccgagtcccata
aatagctatatgaacggttacggtggttacggcagtggcagcgtaccaggcggatccccg
tcaccgtaccatcaagcgcagccaggatcgcaaatttccagtcacagtccgagcggcagt
agtataaaatccgaaccgacgagtccagcgagcggcggaattcacacaccaccaacggca
gcgtcgtcgacaggcgcagctggggggcaagttgtgaaacgggaatacatgggccagcaa
cagaatcagcaggcgcagggtgatttgagacaaatgatctcgatgtatctgccccagggt
gtcgagcaaggagtcgtccagcacggcgccggtgtctattcgcctggtccgtcaccggat
ccgctggcacagcatcatccctcaataccgccactcggtcacatggcagagagtgaccgc
aaaatgttgaatccagacaccggctgttactcggagtccgttcgggcatggtaccgatac
atgtggaagaggtacggggatcaacatccaaacatctgttcctgggattcctactattca
gagaaataa
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