Bombus vancouverensis nearcticus: 117162055
Help
Entry
117162055 CDS
T07628
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117162055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117162055
04131 Membrane trafficking [BR:
bvan04131
]
117162055
03029 Mitochondrial biogenesis [BR:
bvan03029
]
117162055
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bvan04812
]
117162055
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117162055
mRNA cycle factors
P-body specific factors
117162055
Membrane trafficking [BR:
bvan04131
]
Others
Actin-binding proteins
Myosins
117162055
Mitochondrial biogenesis [BR:
bvan03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117162055
Cytoskeleton proteins [BR:
bvan04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117162055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
APG6_N
AAA_16
nSTAND3
AAA_22
Myosin_N
Motif
Other DBs
NCBI-GeneID:
117162055
NCBI-ProteinID:
XP_033199765
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MTTRELYVKGGKVWVPHPEKVWEGAVLLEDYKLKQGTLKVNTDDSNQTKVLEIKSDSDLP
PLRNPDILIGENNLTSLSFLHEPAVLYNLQIRFQRHCIYTYCGIVLVAFNPYNELPIYGN
DTIWAYRGQAMGDLEPHIFAVAEEAYTKLEREGHDQSIIVSGESGAGKTVSAKYTMRYFA
TVGGSTTETQVEKKVLASLPIMEAIGNAKTTRNDNSSRFGKFIEIQFNKHYHITGASMRT
YLLEKSRVVFQTYEERNYHIFYQMCAAAARLPHLHLSHQSKFHYLNQGNDPLIDGVDDLM
CFDETISALTMLGFSSKQQDDMLRILAAIMHLGNVNIGNADNQNSSNENDTETSYIHSSD
KHLLMMCELLGTDVNAMRKWLCHRKIVSMREVFLKPMNVEQAIGARDALAKHIYAELFNW
IVAGINNSLHSQNKPQCFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQ
EEYFKEEIEWTFIDFYDNQPCIDLIETKLGILDLLDEECRMPKGSDSSWADKLYSKCGKS
KHFEKPRFGTSAFLIHHFADRVQYETTGFLEKNRDTVIEEQVDVLRNGDNKLLKKLFSEE
DPKLMVPSNVRLKVSAQKPALNSPKQNKKTVGSQFRDSLNMLMSTLNATTPHYVRCIKPN
DTKEAFEYNPIRAMQQLRACGVLETIRISAAGFPSQRTYNEFFLRYRSLCKFKDIRRDDL
KETCRRILGRYIKDEDKFKFGKTKVLFRAGQVAYLEKLRAERQRDACVMIQKTVRGLICR
SRYKKIRCAVLGLQRYGRGYIARQKAQAVREERAATKIQARVKGWLKRRRYLQIKRTILG
IQTYGRGKLARQKYERMKDNAAAIVIQRFARGYLVRMACKKKLRDIITVQSCIRRHMARK
EFKRLKAEARSVEHVKSLNKGLEKKIMTLQQKITELMKENQVLKNVQNEVIDLKHKLEGL
KSVDAENKKLNAILIEKAKELEKIQDIVKAERDEKMDILQDKERNTQEKEQENMELLGEI
EKLRKELSVANEKLKNNQRGAEENLKYRLEQEKDLLLLDQDQDRGAYQKLLKEYHELEQR
TEMLEQKLAMHAPAHSRSLSNASSSSGQIVSTELPQDDQNIDLGYGSVRSTASSSTPYSR
LETIDWNQQRSDSPPDGEVQSNKSPAETNGPTHAPVDIGLVLKLQQKLKDVEKEKGRLIR
MVEDLERDSPEETSRMQDTFRLQELEMENAQLKKDLGTLRKSVSSTGLTGAQQNLMGQFD
ALQEELERRREECIQLHSVLADNTRRMKSLGSNYGRDVDIINEDGELVLAFETQKKINSR
LKTKRKASREQLEDELQMKEKGWRAQRDEWRAEIDRLQEEIEKQQKLLSVNLSKSPQTQT
EAYMQHEIARLTSENLELQEKYDKIAEECRKFKRQCKILAKRLRDAGYEGDDTKEHKDRP
HMSRGAVPDTAESVSDSAIMSSNSQSGDNGSNLPVIRKKERDYEGMFEFRKEDINIIIRH
LVFELKPRIAVTLLPGLPAYILFMCIRHTDCVNDDEKVRLLLTAYLNAVKRVVKKREDFD
CSVLWFSNTLRLLHNMKQYSGDKPFQIENTPRQNEQCLRNFDLSEYRLVLSNVALWIFNN
IVTNLKERIQALTVPALLEHEAISGLNSNKLGRPRSSSMGEEPESTQQKLNKLLDELTLV
YKTLQYHGVDPEIVVQLFKQLFYFMCASALNNLLLRNELCHWTKGMQIRYNLSHLEQWGR
DRRLEAASEVLQPIVQAAQLLQARKTDEDVNSVCEMCNKLTANQIVKILNLYTPADDFET
RVPVSFIKKVQEKLSERGENNEQLLMDLMYSYTVRLPFNPSDIRLEDIEIPEVLHLPMLK
KV
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgactacgagggagttatacgtgaagggtggtaaggtatgggtgccgcacccagaaaag
gtttgggaaggcgcggtgcttctggaagattacaaattaaaacagggaaccttgaaggtt
aatacggacgattccaatcagacgaaggtcttggagatcaaatcagattccgatttacca
ccgttaagaaatcctgatatacttataggggagaataacttgacatcgttgtcgtttctt
cacgagccagctgttctgtataatctacagattcgttttcaacgacactgtatttacact
tattgcggcatcgttttggttgcgtttaacccatacaatgaacttccaatttatggcaac
gacacgatatgggcgtacaggggtcaggcgatgggcgatttggaacctcatatattcgcc
gtcgctgaagaagcgtacaccaagctggaaagggaaggtcacgaccaatctattatcgtt
tctggagaatccggtgctggaaaaactgtctctgcaaaatatacgatgcgatatttcgct
accgtcggtggttcaacgaccgagacgcaggtcgagaagaaagtccttgcctctctaccg
atcatggaagctatcggtaatgcaaagacaacgagaaacgataattcctcgagattcggg
aagtttatcgagattcaatttaacaaacactaccacatcaccggggccagtatgagaact
tatcttctggaaaagtcaagagtcgtgtttcagacatacgaggaaaggaattatcatata
ttttatcaaatgtgcgcagccgcagcgcgtctacctcatttgcatttgagccaccagagt
aagtttcactatctaaatcaaggaaatgatcccttgatagatggcgtggatgacttgatg
tgtttcgatgagacgataagcgcgctcaccatgcttggattctcgtccaagcagcaggac
gacatgcttcgtattttagcagctattatgcatttgggaaacgtgaatatagggaatgcc
gataaccaaaattcgagcaatgaaaacgacaccgaaaccagttacattcattcgtcagac
aaacatctattgatgatgtgcgagctgttgggcaccgacgtaaacgcgatgagaaaatgg
ctgtgccatagaaaaatcgtgtcgatgagggaagtattcttgaaaccaatgaacgtggaa
caagcgattggcgctagagacgcactggccaaacatatttacgcggaattgttcaactgg
atcgtagctggcatcaataactccttgcattctcaaaacaaaccccagtgtttcatcggt
gtcctggatatctacggtttcgagacgttcgaggtcaattctttcgaacagttttgcata
aattacgcgaacgagaagcttcaacaacaattcaatcagcacgttttcaagttagagcag
gaggagtattttaaggaggagatcgaatggactttcatagacttctatgacaatcaacct
tgtatcgatctcatcgaaacgaaactgggtattctcgatttgttggacgaggaatgtagg
atgccgaaaggttcggatagttcatgggcggataaactttactcgaaatgtggaaaatcg
aaacacttcgaaaaaccacgatttggaacttctgccttcttgattcaccactttgccgac
cgggtgcaatacgaaacgactggatttttagaaaaaaacagagacaccgttatcgaggaa
caggttgacgtactgcgaaacggagacaataagttattgaagaaattattcagcgaagag
gatccgaagcttatggtaccatcgaacgtgagactgaaagtatcggctcaaaagccagca
ttaaattcgcctaagcaaaataagaaaacggtaggttcgcaatttcgcgactccttgaat
atgttgatgtctacattaaacgcaactacaccgcattacgtgcgctgtatcaaaccaaac
gataccaaggaagcatttgaatacaacccaattcgtgcgatgcagcaattacgggcttgc
ggtgtcctagagacgattagaatatccgccgctggatttcccagtcaaagaacatacaac
gaattctttctcaggtacaggagcctctgtaaattcaaggatattcgacgcgacgacctc
aaagaaacctgtcgacgaatattgggcaggtatatcaaagacgaagataaatttaaattc
ggcaagacgaaggttctttttcgtgctggtcaagtagcttatctagaaaagttacgagcg
gaacgacagcgagatgcttgtgttatgatccaaaaaacggtgcgcggtctgatatgccgt
agtaggtataagaagattcgatgtgctgtgcttggtcttcaaagatacggaagaggatac
atcgctaggcagaaagctcaggctgtgagggaagaaagggccgcgacgaaaattcaagct
cgtgtcaaaggttggctgaagaggcgtcgatatctccagataaaacgcacaattctcggt
attcagacgtacggcaggggaaaactggcgcggcagaaatacgaacgaatgaaggacaat
gcggcagcgattgtaattcagagattcgccaggggttaccttgttcgaatggcgtgcaag
aaaaaattaagagatattataaccgttcagtcttgcatcagaaggcatatggcgaggaaa
gagtttaagagattgaaagctgaagcgagaagcgtggaacacgtaaaatctctgaacaag
ggattagagaagaagataatgaccctgcagcaaaagatcaccgagcttatgaaagagaat
caggtattgaagaacgttcagaacgaggtgatagacttgaaacacaaattagaaggactg
aaatccgtagacgcggagaataagaaattaaatgctatactaatagagaaagcgaaagaa
ttagaaaagattcaggatatcgtgaaagctgaaagagatgaaaaaatggatattttacag
gacaaggaaagaaatacacaagagaaagaacaagaaaatatggagcttctgggtgaaatc
gaaaagttgcgaaaggaactttcggtagctaatgaaaagttgaagaacaaccaacgcggt
gctgaagagaacttgaagtaccgtttagaacaggaaaaagatcttctcctgctggaccag
gaccaggatcgtggcgcctatcagaaattattgaaagagtatcacgagttagagcaacgt
acagaaatgttagaacagaaactcgctatgcatgctcctgcacactcgcgttctcttagc
aatgcttccagcagtagcgggcaaatcgtgtctacggaacttccacaagatgaccagaat
atcgatttgggttacggttcggtaagatcgactgcttcttcctcgactccttactcacgg
ctggaaacgattgactggaatcagcaaaggtcagatagtccacccgatggagaggtccaa
tcaaataaatcacctgccgaaacgaatggtccgacacacgcgccagtagatattggatta
gtgttgaagcttcaacagaaattaaaggatgttgagaaagagaagggaagattaatcaga
atggtggaagatttagaacgcgatagtcccgaagaaacttcgaggatgcaagatacattt
aggcttcaagaattggaaatggaaaatgctcaattaaagaaagatttaggtactttaaga
aaaagcgtttcctcgacaggcctaactggtgcccagcagaatctcatgggacaatttgat
gcgcttcaagaagagcttgagagaagacgagaagaatgcattcaactgcatagcgtgttg
gcagataatacacgaagaatgaagagcttaggctcgaattatggccgtgatgtggacatt
ataaacgaagacggcgaattagtactcgccttcgaaacacagaaaaagatcaacagtaga
cttaagacaaagcgaaaggcctcaagagagcaattagaagacgagcttcaaatgaaggag
aaagggtggcgggcacagagggatgaatggcgagcggaaatcgataggttacaggaggaa
attgagaagcagcagaagttactatccgtgaatttgagcaaatcgccgcagacccagact
gaggcatatatgcaacacgaaattgccaggctaacgtctgaaaatttggaattgcaagaa
aaatacgataaaatagcagaagaatgcaggaagtttaaaaggcaatgcaagatacttgcg
aaacgtctgagggatgcaggctatgagggagacgatactaaggaacataaggaccgccct
catatgtcaaggggcgccgtgccagatactgcagaatctgtaagcgattctgcgataatg
tcttccaatagtcagtcgggagataatggaagtaatttgccagttatccggaagaaagaa
agagattatgagggcatgttcgagtttagaaaagaagatatcaacataataatacgtcat
ctcgttttcgagttaaaacctagaatcgcggtgacattacttcctggtctgccagcttat
attctttttatgtgtataaggcatacagactgtgtaaacgacgatgaaaaagtgagattg
ttattaacggcatatctcaatgctgtgaaacgtgtagtcaagaaacgcgaggactttgat
tgtagcgtactctggttcagtaacaccttgagattgttgcataatatgaaacagtattcg
ggagacaaaccttttcaaatcgaaaacacaccaagacaaaatgagcaatgtcttagaaat
ttcgatttaagcgagtatcgccttgtattgagcaacgtggcgctttggattttcaataat
atcgtaacgaatcttaaagaaaggattcaagctctgactgtccccgctcttctcgaacac
gaagctatatcaggcttgaattctaacaaactcggtcgaccacgatcatcctctatggga
gaggagccagaatcgactcaacaaaagcttaataaacttctcgatgaacttactttagtg
tataaaactcttcaatatcatggtgttgatcctgagattgtcgtgcaacttttcaaacaa
ctgttttacttcatgtgcgctagtgctctgaataacttgcttctcaggaatgaactttgt
cactggacgaagggcatgcaaataagatataatttaagccatttggaacaatggggacga
gatcgaagattagaagcagcatccgaagtgcttcagccaattgtacaagcagcacagctt
ttgcaagctcgtaaaacagatgaagacgtaaattctgtgtgcgaaatgtgcaacaaatta
accgcgaatcaaatagtgaaaattctaaatttgtatacaccagctgacgactttgaaacg
cgcgtgccagtttccttcatcaagaaggtacaggaaaaattgagtgaacgtggtgagaac
aacgaacagctgttaatggatcttatgtattcatacacagtaagattaccattcaatcca
tcggatattcgactagaggatatcgaaataccagaagtacttcatttacccatgctcaaa
aaggtgtaa
DBGET
integrated database retrieval system
