Bombus vancouverensis nearcticus: 117162251
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Entry
117162251 CDS
T07628
Name
(RefSeq) serine--tRNA synthetase-like protein Slimp
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117162251
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bvan01007
]
117162251
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvan03016
]
117162251
Enzymes [BR:
bvan01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
117162251
Amino acid related enzymes [BR:
bvan01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117162251
Transfer RNA biogenesis [BR:
bvan03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117162251
Prokaryotic type
117162251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
DUF1664
DUF6730
Seryl_tRNA_N
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
117162251
NCBI-ProteinID:
XP_033200003
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MANRVARFVEKRMVRKCITRNTLKFVDTLWISKRRYTSALFISNIDGKEYYSFIQPYIDF
DKRLTDMERLQQDLAARKLNLNAKDVKSMWDFYNSVHTNKSKLEQRSQEISNKLVPFFGK
QENLTTGEQAEFTKLKLQISAVKHDLRMIKDALETLKESILKKMFQLPNELDGKTPVEGP
IVIKRVNSLNERPHPDKKNHIEIGRHLGLLEYRNPMQYYLCNDAALFELGILSYVGKILG
ADNMIRVAGADFSRSLIIDGSGLNHEDPADAFIIDNYSEVDKDSPNCMHLVGGASLFSFL
AMHAKQLIDPRHFPIAYFSTGRQYTPFRAGSTPIGLFTVCQASAALAFILVKDGKSEEYH
TQFERLLNTVCKLYDNVCDHYQIVLRSSSELRPWESMRVSFELWSPFSRQYIEVGHISVY
GEYFSKRLQIIYRSVDGPSFPSVISGTVLSVPRLLGCLLEQNPDKFVIPQKVLEHMPADN
TCL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcgcgtagcacgtttcgtagagaaacgtatggttcgtaagtgcataacgcgt
aatactttgaaatttgtcgatacgctatggatttctaaaagacgatatacttctgcgtta
tttatttcaaacatcgatggcaaagaatattattcatttatacagccgtatatagatttt
gataaaagattaacagatatggaaaggttacagcaagatttggcagcgcgaaaattaaat
ttgaacgccaaggatgttaaaagtatgtgggacttttacaattctgtgcatacgaataaa
tctaaattagaacagagaagccaagagatatcgaacaaactagttcctttttttggaaaa
caagaaaatttaaccacaggggaacaagcggaatttacaaaattaaaattgcaaatctca
gcggtaaagcatgacttgagaatgattaaagatgccttagagactttaaaggaaagtatt
ttgaagaaaatgtttcaattaccaaacgaattagacgggaagacaccggtcgagggtcct
atcgtaataaaacgcgttaattctttaaacgaacgcccacacccggataagaagaatcac
atcgaaattggaagacatcttggtttgttggagtatagaaatccaatgcagtactattta
tgtaacgacgcggctcttttcgaacttggtatattaagttacgttggaaaaatacttggc
gcggataatatgatcagagtagcgggcgcagattttagtcgtagcttgataatagacggt
tctggtttaaatcacgaagatcctgcggatgcttttataatagacaattatagcgaagta
gataaagattcgccgaattgtatgcaccttgttggaggtgcaagtttattttcatttttg
gcaatgcacgcaaagcagttaatagatccacgtcattttccaatagcatatttttccact
gggaggcaatacaccccttttcgagcaggttctaccccgatcggtttgttcactgtttgt
caagcttcggctgcgcttgcgtttatattggtgaaggatgggaaaagcgaagagtatcat
acgcaatttgaaagattgttaaacaccgtatgcaagttgtacgataacgtgtgcgatcat
tatcaaattgtgctgagatcatcttcagaattgcggccttgggaatcaatgcgcgtatct
ttcgaactgtggtctcccttctcgagacaatacatcgaagttggtcatatatccgtgtac
ggtgaatattttagtaaaagattgcagattatttatcgatcggtagatgggccatccttc
ccttccgtgatatctggcactgtattgtcggtaccacggcttctaggatgcttattggaa
caaaatccagataaatttgttattccacagaaagtcttggaacatatgcctgcagataat
acttgtctctaa
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