Bombus vancouverensis nearcticus: 117162781
Help
Entry
117162781 CDS
T07628
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvan03021
]
117162781
Transcription machinery [BR:
bvan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117162781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_17
TPR_10
TPR_16
TPR_11
TPR_9
TPR_Slam
ARM_TT21_5th
TPR_7
ARM_TT21_4th
PknG_TPR
ANAPC3
Motif
Other DBs
NCBI-GeneID:
117162781
NCBI-ProteinID:
XP_033200624
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MLVLDYNDFPGIAGANENVIELDLDQISEIDGILSNLRQGRPRLNIWVNLALEYYKQHKI
EHFIKILESSWIDAAIDYCNYEQDQMRALDMLAAYYVQEANREKNKARKKDLFAKATLLY
TTADKIIMYDENHLLGRAYLCLLEEDRMAQADAQFNFVLSQSPNNIPSLLGKACIAFNKR
DYRDALAFYKKALRTNPNCPAAVRLGMAHCFMKLNNQEKAYLAFERALQLDDRCVGALVG
LSVLKLNQGQPDSIKAGVQMLSRAYIIDSTNSMVLNHLANHFFYKKNYIKVQNLAFYAFQ
NTANEVMRAESCYQLARVFHVQADYDQAFRYYYQAIQFAPPVFVLPYFGLGQMHVYRGDA
ENAAKCFEKVLEVQPDNYETMKILGSLYANSSSQSKRNIAKNHLQKVTQQFPDDIEAWIE
LAQILEQSDYNAALNAYGMVTRILKEDVQADIPPEILNNVGALHYRLGNFEEARKNFEES
LTRSKADVLHDPVYYNSITVTTTYNLARLNEALCIFDKAENLYKSILWKHPNYIDCYLRL
GCMARDKGQIYEAIDWFKDALKINNEHSGAWSLLGNLHFDKMQWGPSQKKFKRILTNPET
STDAYSLIALGNIWLQMLHQSRKDKDQKKQYQDRALAMYKKVLQNDPKNIWAANGIGAVL
AHKGCVNEAKDIFSQVREATAEFCDVWLNIAHIYVEQKQFFNAIQLYINCLQKFYKYHHV
KVLQYLGRAYFKAGKLKEAKLTFLKGRRVAPQDTVLLYNVALVLQRLATQILKDKKSTLT
TVLQAVSELRISHKYFQYLSTHEGKIWQLAKAKARCCQDLLSQAQYHVARARQWDEEEKM
FRRKQEEERQAFKMRQMEEQRRLEEMQRQKEQEMLQKRLEYIEKTKNALVFDAMSSEKPG
RKGKQARTDQYVSDSDSSGREESREEARRQRKRKRKASERKENRVKGKVMRKKRMGSGES
GSESDRLKPKRGRKWIIKKDRAFWKSTAETAKGKMPLSKEITSTSESDSDLGGFKIANRS
ESRNEGHVRRNRRIIYHSEESRASKSRSRSRSKFRSRSRSSSRLGSRSRSRSRSGIQSRS
VSRPRSRSRSGSKLRSQSCSKSPSRSRSVAEKSGSRPTSRSGSWKRQSRSRSRSGLRKSE
SQPRSRLGSAASARSRSGFAAGVRSRSRSPGGSRKVAWRSTSRSXSGSRSGSQSGRRISR
SRSRSKCKSVSRSRSRSGSRSKSGSXSRSASGSASSATLESRKSVLSSDVGSRHSSTDRG
GGGESE
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcctcgattacaacgattttcctggaatagcaggagctaatgaaaacgtaatc
gagttagacctggatcaaatatcagaaatagatgggattcttagtaatttacgtcaagga
cgtccacgacttaacatttgggtcaatttggctcttgaatattacaaacaacataaaatc
gaacatttcattaaaatacttgaatcttcttggattgatgctgctattgattattgtaac
tatgaacaagatcaaatgcgtgcgttggatatgttggctgcatattatgtgcaggaagcc
aacagagaaaagaataaagccagaaagaaggatctatttgcaaaagccactctattatat
acaactgcagataagattattatgtatgacgagaatcatttacttggcagagcttatctc
tgcctcctggaagaggataggatggctcaggctgatgcccaatttaattttgtactaagt
cagtctccaaataatattccttccctactgggaaaagcatgcatagcgtttaacaaaaga
gattacagagatgcgcttgctttttataaaaaggcattgagaacaaatccaaattgtcca
gctgctgtgaggttggggatggcgcattgttttatgaaattaaataaccaggaaaaagcg
tatttagcatttgaaagagctttacagttagatgaccgatgtgttggagcattagttgga
ctttcagtactgaaactgaatcaaggacagcctgatagtatcaaagcaggtgttcaaatg
ttatcaagagcttatatcattgactcgactaattccatggtgttgaatcatttggcaaat
cattttttctataaaaagaactacattaaagtacagaacttagccttctatgcatttcag
aataccgcgaacgaggttatgcgtgcagaaagttgctatcaattagccagagtatttcat
gttcaagctgactatgaccaagcgtttcgatattactatcaggcaatacaatttgcgcct
ccagtttttgtattaccatacttcggcttaggtcaaatgcatgtttatcgtggtgatgca
gaaaatgcagcgaaatgtttcgaaaaggtgttggaagtgcagccagataattatgaaaca
atgaaaattcttggatctctttacgcaaattcaagttctcaatccaaacgcaacattgct
aaaaaccaccttcagaaagtaactcaacaatttccggatgatattgaagcatggattgaa
ttggctcaaatattggagcaaagtgactataatgccgccttaaatgcatatggtatggta
actcggattttaaaagaagatgtccaggcagatataccaccagaaattctaaataatgtt
ggtgctctacattatagacttggaaactttgaagaagctaggaaaaattttgaggaatct
ttaacgcgttctaaagctgatgtcttacacgatcctgtatactataactcaattacagtt
acgacgacatataatttggctcgtttgaacgaagctttatgtatatttgataaagcagaa
aacttatacaaatccattttatggaaacatccaaactatatagattgttatttacgactt
ggctgtatggctcgagataaaggacaaatttatgaagcgattgattggtttaaggatgct
ttaaaaataaataacgagcactcaggtgcatggtctcttttgggtaacttacatttcgat
aaaatgcaatggggtcctagccagaagaaattcaaaagaattttaacaaatccagaaaca
agtaccgatgcctattctttgattgctttgggtaacatttggttgcaaatgttgcatcaa
agtagaaaagataaagatcaaaagaagcaatatcaagacagagcattggctatgtataaa
aaagttttgcaaaatgatcctaaaaatatttgggctgcaaatggaataggagctgtacta
gcgcataaaggttgtgtaaatgaagctaaagatattttttctcaagttcgagaagcaaca
gcagaattttgcgatgtatggttgaatattgcgcacatttatgtagagcaaaaacaattc
tttaacgctatccaactgtatataaactgccttcagaagttctataaataccatcatgtc
aaagttttgcaatatcttggaagagcttactttaaagctggtaaattaaaagaagcaaaa
ttgacatttttaaagggaagaagagtagctccacaggacactgttttgttatacaatgtt
gcacttgtccttcaacgtctagcgacacaaattttgaaggataagaagtccacattaaca
acagtgctccaggcagtttccgaattgcgaatctcacataaatacttccaatatctatca
acgcatgaaggtaaaatttggcaacttgcgaaagcaaaagcaaggtgctgtcaagatctt
ttatcgcaagcgcaatatcatgttgccagagctagacaatgggacgaggaagaaaaaatg
tttaggagaaaacaagaagaagaaagacaagcatttaaaatgcgacaaatggaagaacaa
cggagacttgaagaaatgcaacgacaaaaagaacaggaaatgttacagaaacgtctagag
tacattgaaaagacaaagaacgctttggtattcgatgcaatgtcttcggaaaaacctgga
aggaaaggaaaacaagcacgcactgatcaatacgttagtgacagtgatagttctggaaga
gaggaaagtcgggaggaagctcgtagacaaaggaaacgcaaaagaaaagcaagtgaacgt
aaagaaaacagggtcaagggtaaagtaatgcgcaagaaaagaatggggagtggagaaagt
ggttcagaaagtgatcgactcaagccgaaacgtggaagaaaatggattattaagaaagac
agagcattttggaaaagtacagctgagactgcaaagggaaagatgcctttatcgaaggaa
attacatcaacgagcgaatctgatagcgatttaggaggttttaaaattgccaaccgaagt
gaaagccgtaacgaaggtcacgtacgcagaaacagacgaattatttatcactcagaagaa
tcccgtgcatcgaaatctaggtctcgttccagatcgaaatttagaagccgttctagaagt
agttcacgattgggatcgcgatcacgatcacgatcacgatcaggaattcaatctcgatcc
gtatctcgtccacggtctagatctcgttcaggttccaagttgagaagtcaatcgtgttcg
aaaagtccgtcgagatccagatccgttgcagagaaaagtggttcacgcccgacatcaaga
tcagggtcgtggaagaggcaatcgcgatcaagatcgcgtagtggtttgagaaaaagtgaa
tcgcagccaagatcaagattgggttctgcagctagcgcgcgatcaagatcgggttttgca
gctggagtacgatcgagatcaaggtctcctggtggttccagaaaagtagcttggcgatca
acgtcaagatcataatcaggatcaaggagtggttcacagtcggggagacgtatatcaaga
agcagaagccgatcaaaatgtaaatctgtgtcaagatctagatcgcgttccggctcacgg
tcaaagagtggctcttgaagtcgcagcgctagtggatcagcaagctctgctactttagag
tcgagaaaatcagttttgagcagtgatgttggttcccgccattcgagtacagatcgagga
ggtggcggcgaaagcgaataa
DBGET
integrated database retrieval system
